Echr020868.1
Basic Information
- Insect
- Epirrita christyi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_951392215.1
- Location
- OX595855.1:9649938-9653709[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-14 1.7e-11 44.4 0.0 1 38 26 64 26 68 0.94 2 2 7.5e-19 9.1e-16 58.0 0.0 1 43 234 277 234 279 0.95
Sequence Information
- Coding Sequence
- atgttgatattgcatcACAAATTGAAACGCGCAGCCCTAGATGGAGCCTGCAACAGCTCAACCAAGCGGAACTACACAGAAGATGAGCTCCAATCAGCCCTTCGAGATATCCAGACAGGTAGACTCGGCACACGACGAGCGGCCGTAGTCTACGGCATCCCCCGGTCAACACTACGAAATAAGGTCAACAAGTTTGGTCTGACACCGGATCAGCATGAATCTGAGCCTGATAGCGACCCGGAACGGACAGACTCCCCACCGTCGGTGATACTAAAGATCCCGACTTTCCCCCCACCGGATGACAAAAGCCCATCTCCGGCCTTACCAGTGACACCAATATCGCCTATGACTCCAAAATACCAAGCGTCCTCTCGTAATCCTTCTTGCCAAAAGCCGTTGCTTCTCCCACCTTCCGTTTTCGCCGATCCTCCAACTCAACACTTGTTTACATCTCTCAGTGATGTCATAGCGAAAAGCATCAGCCAAAAGTTCCAGCAACCCTTAGACAGAACGCAATCAGATATGCAGCAGTACATGCGAGCACCAGACCGACATGTATCAGTCATCAAAACCCCTCCTGATAATCATCAGAGAAACTATCAAATGCCTAGTAATTCTCGAGGTGTTTCCAACAATAATGGTCAATCGGCTGCAGGGGGGAAGGGTACCCGACCCAAACGAGGGAAATACAGAAACTATGATAGAGACAGTTTGGTGGAAGCTGTGAAGGCAGTTCAAAGAGGTGAGATGTCAGTCCATCGCGCCGGGTCTTACTATGGAGTGCCGCATTCGACTCTTGAGTATAAAGTAAAGGAGCGTCACTTGATGCGGCCACGAAAACGTGAGCCCAAACCACAGCCCGATGTAAAACCTCAGCCTTCGAAGCCACAACCGCCTAAACCAGTAACGAAACCCTTCTCAAACGGACTGAATGGTCCTGAAACGGGGGGCTACCCTCCAGGGTATCCATTTTGGCCTGGAACTAGCTTCGCACCACACCCTGCTCCAGACCTATACGCATCTCATATGATGCGGCGATTGCGTGAGGAGGCACCTCCTCCAGCCAATGGATCCTTCCTAGAAGGGATTATCAGGTCTAGCTTGGAGCAACGACCTGGAGCAGCGCTTTTACAGCGATTAACGGCAGAGCCTCGTGTGCCCGGAATCTCCGGGCCGGTAGATTCCCCAAGTCTGCTGCGAAGGTTGGCAGGGACTGCGTCCCCAGAAGACGGGCCTCCGGCTCGACGACCGCGCTTAGACAGTTCTGACAGGCAACTGGCGGCCGAGATGCGTGAAGCAGTACAGCGACTACGCGCGGACAAACTCCGGCCTCGTAATGGAACCCCTACGCCACCGCTTTCCCCCCCACCGGCGCCCCCGGCCCCCCCAGACCGTGCCTAG
- Protein Sequence
- MLILHHKLKRAALDGACNSSTKRNYTEDELQSALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTPDQHESEPDSDPERTDSPPSVILKIPTFPPPDDKSPSPALPVTPISPMTPKYQASSRNPSCQKPLLLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRTQSDMQQYMRAPDRHVSVIKTPPDNHQRNYQMPSNSRGVSNNNGQSAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPSKPQPPKPVTKPFSNGLNGPETGGYPPGYPFWPGTSFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLEQRPGAALLQRLTAEPRVPGISGPVDSPSLLRRLAGTASPEDGPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01099770; iTF_00119528; iTF_01428974; iTF_00318032; iTF_01161236; iTF_01219705; iTF_01171387; iTF_00377022;
- 90% Identity
- iTF_01171387;
- 80% Identity
- -