Obrm004040.1
Basic Information
- Insect
- Operophtera brumata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_001266575.1
- Location
- JTDY01000899.1:80867-82725[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-15 3.4e-12 45.8 0.0 1 38 35 73 35 77 0.94 2 2 5.8e-19 5.2e-16 58.0 0.0 1 43 243 286 243 288 0.95
Sequence Information
- Coding Sequence
- atgtttgtatcaaAGGCGCATAGGGTCGAAGAAGATAAAGAGACTTCATTGAAACGCGCAGCCCTAGATGGAGCCTGCAACAGTTCATCCAAGCGAAACTACACAGAAGATGAGCTCCAATTAGCCCTTCGAGATATTCAGACTGGTAGACTCGGCACACGACGAGCGGCCGTGGTCTATGGCATCCCCCGGTCCACACTACGAAATAAAGTCAACAAGTTCGGTCTGACACCAGATCTGCATGAGTCAGAGCCTGATAGCGACCCGGAACGGACAGACTCCCCACCGTCGGTGATACTAAAGATCCCGACCTTCCCCCCACCGGATGACAAAAGCCCTTCTCCCGCCACACCAGTGACTCCAATATCGCCTATGACTCCAAAATTCCAAGCGTCCTCGCACAACCCTTCTTGCCAAACGCCGTTGCTCCTCCCACCTTCAGTCTTTGCCGATCCTCCAACACAACACCTGTTTACATCTCTCAGTGATGTCATAGCGAAAAGCATCAGCCAAAAGTTCCAGCAACCCTTAGACAGAACGCAATCCGAAATGCAGCAATACATGCGAGCTCCGGACCGACATGTGTCAGTCATTAAAACACCTCCCGATAATCATCAGAGAAACTACCAAATGCCTAGTAATTCTCGAGGTGTTTCCAACAATAACGGCCAATCAGTTGCAGGAGGGAAGGGCACCCGACCCAAGCGAGGGAAATATAGAAACTACGATAGAGACAGTTTGGTGGAAGCTGTGAAAGCAGTTcaaagaggtgagatgtcagtaCATCGCGCTGGTTCCTACTATGGAGTGCCGCATTCAACGCTAGAGTATAAAGTAAAGGAACGGCACTTGATGCGGCCACGAAAACGTGAGCCGAAACCCCAACCCGATGCAAAACCTCAGCCTACGAAGCCGCAACCGCCCAAACCAGCGACAAAACCATTCTCGAACGGACTAAATGGTCCTGAAACTGGGGGCTACCCTCCAGGTTATCCATTCTGGCCTGGAACTAGCTTCGCGCCGCACCCTGCTCCAGACCTGTACGCGTCTCATATGATGCGGCGGTTGCGTGAGGAGGCACCTCCGCCGGCCAACGGATCCTTCCTCGAAGGTATTATCAGGTCCAGCTTGGAGCAGCGACCTGGTGCAGCGCTTTTACAGCGGTTGACGGCCGAGCCTCGCGTGCCCGGGATATCCGGACCAGTCGACTCCCCAAGTCTTCTGCGAAGGCTGGCCGGGACCGCGTCTCCAGAAGACGGACCTCCGGCTAGACGACCGCGCTTGGACAGCTCCGACAGGCAACTGGCGGCAGAGATGCGCGAGGCTGTACAGCGACTGCGCGCGGACAAGCTCCGGCCTCGTAATGGAACGCCCACGCCACCGATATCCCCACCACCGGCACCCCCGGCCCCCCCAGACCGCGCCTAG
- Protein Sequence
- MFVSKAHRVEEDKETSLKRAALDGACNSSSKRNYTEDELQLALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTPDLHESEPDSDPERTDSPPSVILKIPTFPPPDDKSPSPATPVTPISPMTPKFQASSHNPSCQTPLLLPPSVFADPPTQHLFTSLSDVIAKSISQKFQQPLDRTQSEMQQYMRAPDRHVSVIKTPPDNHQRNYQMPSNSRGVSNNNGQSVAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDAKPQPTKPQPPKPATKPFSNGLNGPETGGYPPGYPFWPGTSFAPHPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLEQRPGAALLQRLTAEPRVPGISGPVDSPSLLRRLAGTASPEDGPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPISPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663005;
- 90% Identity
- iTF_01171387;
- 80% Identity
- -