Oarm015618.1
Basic Information
- Insect
- Oxytorus armatus
- Gene Symbol
- bab1
- Assembly
- GCA_958009045.1
- Location
- OY253753.1:15158799-15174556[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.4e-14 53.8 0.0 1 43 69 112 69 114 0.95 2 2 2.3 2.5e+03 -1.5 1.1 6 15 187 196 185 200 0.89
Sequence Information
- Coding Sequence
- ATGTATTCTCGTTTTAATCAAAATACCCTTACACCAATGGCCAAGTTGTTGGAATCTTCCCACGCTTGGCTCGGTGCCTCTACCTCCAATATATCAGACAGTTATCAGTATCAGCTTCAATCGCTCTGGCAAAAGTGTTGGAACACGAACTCTGGACTGGTGCATAATCTTCGATTTCGGGAGCGCGGACCATTGAAGTCATGGCGACCCGAGACGATGGCAGAAGCGATTTTTAGCGTTCTCAAGGAGGGACTATCGCTCAGTCAAGCAGCTAGGAAATACGACATCCCGTATCCGACGTTCGTACTTTACGCTAACCGAGTCCACAACATGCTCGGTCCAAGCTCCGATGGCGGGGCCGATCTTCGGCCGAAGGGTCGCGGAAGACCTCAGAGGATTCTACTAGGTGTATGGCCCGACGAGCACATACGTGGCGTAATAAGAACCGTCGTGTTTCGCGACGGTAACATCAAGGAGGAACCAACACCGATTTATCCGAGTCTGACGAATTACGCTTGCAACGGTCCCGAGGGCGCGGTCAGTCCAGGTGCCGCAGCCGCCGCTGCGGTCGCCGCGGTTGCTCAAGGTCTTCGGCATCAAATGTGCAGTATGGTGGCAGCTGCACAATCACACCAGCACGACATGATAGCGACCAATTTGTCGGCGAATTTTCAAGCCGCGGTCCAAGTTAGTCAGCATCATCTTAACAACAATAGTCCAGCtagcaacaataacaacaacaacaacaacaataacaacagaAATTCACCGTTGATGCTGGGCCTGCCGAGTCCCGGTTCGGGTGGACCACCCGAGAGTCCAATGGAGGGTAGTCCATTAGCGAGTCCACTGGCGCCGCTCATGGATCCGGCGCATATACCGAGTAGTGTGGAGGTTGGCATTGGCGTCAGTGGAATGACTTACAAACCGACCAGAAGCTTCATCAGTCCGAGACCGGAGAATATCTTTCAGGATGATATCGCCGATCTCGTGAAGAATTCTCACGCTCACAAGGACAAGGATAAAATTCCGGTGAAACTCGAGCCACTTACGGAATCGCGAAGCGAGCAATAA
- Protein Sequence
- MYSRFNQNTLTPMAKLLESSHAWLGASTSNISDSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRTVVFRDGNIKEEPTPIYPSLTNYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMIATNLSANFQAAVQVSQHHLNNNSPASNNNNNNNNNNNRNSPLMLGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPTRSFISPRPENIFQDDIADLVKNSHAHKDKDKIPVKLEPLTESRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01207266;
- 90% Identity
- iTF_01056712; iTF_00451850; iTF_00058604; iTF_00057844; iTF_01273013; iTF_00350920; iTF_00168303; iTF_00438671; iTF_00459663; iTF_00343093; iTF_01000461; iTF_00996950; iTF_01001174; iTF_01560358; iTF_00996254; iTF_01306356; iTF_00050722; iTF_01379126; iTF_00629016;
- 80% Identity
- -