Ajap017985.1
Basic Information
- Insect
- Asobara japonica
- Gene Symbol
- bab1
- Assembly
- GCA_017141405.1
- Location
- JADHZF010000068.1:578111-582947[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-17 1.8e-14 53.9 0.0 1 43 41 84 41 86 0.95 2 2 5.8 3.3e+03 -1.4 1.1 6 15 162 171 160 175 0.89
Sequence Information
- Coding Sequence
- ATGGGCGTGCCAGACAGCTACCAGTATCAACTGCAATCGCTTTGGCAGAAATGCTGGAATACGAACTCTGGGCTTGTGCATAATCTGCGCTTTCGTGAACGTGGACCATTGAAATCGTGGAGGCCTGAGACCATGGCTGAGGCGATTTTCAGTGTTTTAAAGGAGGGACTTTCGTTGAGTCAAGCAGCGAGAAAATACGATATTCCATATCCGACCTTCGTCCTATACGCCAACCGTGTACACAACATGCTTGGACCGAGCTCCGATGGCGGGGCCGGTGAGTATCTGCGGCCAAAGGGACGAGGCAGACCCCAGAGGATTCTCCTGGGTGTTTGGCCGGACGAGCATATCCGTGGTGTTATCAGGGCTGTTGTATTTCGTGACGGTTCCATCGTCAAGGACGAGCCAAATCCAATGTATCCAAGCCTAGCGAATTACGCGTGCAATGGGCCAGAGGGGGCGGTGAGCCCTGGTGCTGCTGCGGCTGCTGCGGTTGCCGCGGTCGCCCAAGGTCTCCGACATCAAATGTGCAGCATGGTAGCCGCTGCCCAATCCCATCAGCACGACATGATGGCGACAAATCTATCAGCAAACTTCCAGACGGCTGTCCAGGTCAGCCAGCACCATCTGAACAACAACAGTGGGTCCAGCAACAACAATAACACAAACAGCAATAATCGTAATTCACCATTGATCCTGGGCTTGCCAAGTCCCGGCTCGGGTGGACCACCGGAGAGCCCAATGGAAGGAAGTCCTTTAGCAAGCCCCCTAGCACCACTTATGGATCCAGCTCACATACCAAGCAACGTGGAAGTTGGCATTGGTGTCAGTGGTATGACTTACAAGCCCCAACGCAGCTATGTCAGCCCTAGACCGGACAACCTATTCCAAGAAGATATTTCCGATCTTGTCAAGAGTTCACATGCCCACAAGGACAAGGACAAAGTGCCAGTTAAACTTGAACCTTTGACTGATTCCAGAAGCGAGCAGTAA
- Protein Sequence
- MGVPDSYQYQLQSLWQKCWNTNSGLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGSIVKDEPNPMYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHDMMATNLSANFQTAVQVSQHHLNNNSGSSNNNNTNSNNRNSPLILGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSNVEVGIGVSGMTYKPQRSYVSPRPDNLFQEDISDLVKSSHAHKDKDKVPVKLEPLTDSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057558;
- 90% Identity
- iTF_01129256;
- 80% Identity
- -