Dcoc003338.2
Basic Information
- Insect
- Dinocampus coccinellae
- Gene Symbol
- bab1
- Assembly
- GCA_963920625.1
- Location
- OY987185.1:632978-641157[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 9.2e-15 53.8 0.0 1 43 61 104 61 106 0.95 2 2 2.8 2e+03 -1.7 1.5 6 15 179 188 176 192 0.87
Sequence Information
- Coding Sequence
- ATGTGGTTACTGgcCAAGTTGTTGGAATCTTCCCACGCTTGGCTCGGTGCCTCCACCTCCAATATATCAGCAGACAGTTATCAGTATCAACTTCAATCGCTTTGGCAAAAATGTTGGAATACGAATTCAAGTTTGGTGCATAATTTGCGATTTCGTGAACGTGGACCACTCAAATCGTGGCGACCAGAAACAATGGCCGAGGCGATATTCAGTGTATTGAAGGAGGGATTATCATTGAGTCAAGCTGCTAGAAAATACGATATACCATATCCAACATTTGTACTTTATGCAAATCGTGTGCATAATATGTTAGGACCTAGTTCCGATGGAGGAGCCGATTTGAGACCAAAAGGCCGGGGTAGACCGCAAAGGATACTCCTTGGTGTTTGGCCGGATGAACATATTCGTGGTGTGATAAGAGCTGTTGTATTTCGTGATGGTGCTATCAAGGAAGAACCAACACCGATATATCCGAGTTTAGCGAATTATGCGTGTAATGGACCGGAGGGTGCAGTGAGCCCCAGTGCTGCTGCGGCCGCTGCGGTTGCCGCGGTTGCCCAAGGTCTCAGACATCAAATGTGTAGTATGGTGGCAGCTGCACAATCACATCAACACGAAATGATCGCGACAAATCTTTCAGCAAATTTCCAAGCTGCTGTACAAGTTAGTCAACAtcatttaaacaataatagtGGAACAAGTAATAACAACAATTCGAGTGGTAGAAATACACCATTGATGTTGGGTTTACCGAGTCCAGGATCGGGTGGACCACCAGAAAGTCCAATGGAAGGTAGTCCACTTGCGAGTCCATTGGCGCCATTAATGGATCCAGCGCACATACCAAGCAGCGTTGAAGTTGGAATTGGTGTTAGTGGTATGACATACAAACCACAACGTAGTTATGTTAGTCCACGGccggaaaatatatttcaggaAGATATTGCTGATTTGGTGAAGAGTTCACATACAAGTCACAAGGATAAAGATAAAGTACCAGTGAAACTTGAACCATTTGCTGATTCACGTAGTGAACagtaa
- Protein Sequence
- MWLLAKLLESSHAWLGASTSNISADSYQYQLQSLWQKCWNTNSSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGAIKEEPTPIYPSLANYACNGPEGAVSPSAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHEMIATNLSANFQAAVQVSQHHLNNNSGTSNNNNSSGRNTPLMLGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVSGMTYKPQRSYVSPRPENIFQEDIADLVKSSHTSHKDKDKVPVKLEPFADSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01207266;
- 90% Identity
- iTF_01129256;
- 80% Identity
- -