Mcin006153.1
Basic Information
- Insect
- Meteorus cinctellus
- Gene Symbol
- bab1
- Assembly
- GCA_030523045.1
- Location
- JAPYZF010000183.1:88443-106027[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-17 1.1e-14 53.8 0.0 1 43 61 104 61 106 0.95 2 2 2.7 2e+03 -1.5 1.1 6 15 181 190 179 194 0.89
Sequence Information
- Coding Sequence
- ATGGTGAGGGCACAGgCCAAGTTGTTGGAATCTTCCCACGCTTGGCTCGGTGCCTCCACCTCCAATATATCAGACAGTTATCAATATCAACTCCAATCGCTCTGGCAAAAATGTTGGAATACGAATTCAAGTCTGGTGCATAATTTGCGCTTTCGTGAACGTGGACCACTCAAATCATGGCGACCAGAAACGATGGCCGAAGCGATATTCAGTGTCTTAAAAGAAGGACTGTCATTAAGTCAAGCTGCTAGgAAATATGATATACCATATCCAACGTTTGTACTTTATGCAAATCGTGTGCATAATATGCTTGGGCCTAGCTCCGATGGCGGGGCCGGTGAGTATCTGAGACCAAAAGGCAGAGGTAGACCGCAAAGGATTCTCCTTGGTGTTTGGCCGGACGAACATATTCGAGGTGTGATAAGAGCTGTTGTGTTTCGCGACGGTGCTATCAAGGAAGAACCAACACCAATTTATCCCAGTTTGGCGAATTATGCCTGCAACGGACCGGAGGGCGCAGTGAGCCCCGGTGCTGCTGCGGCCGCTGCGGTTGCCGCGGTCGCCCAAGgtCTTAGACATCAGATGTGCAGTATGGTTGCAGCGGCGCAATCCCACCAACACGAAATGATCGCAACAAATCTCTCAGCAAACTTCCAAGCCGCGGTGCAAGTCAGTCAACACCATCTGAACAACAACAGTAGCACGAGTAACAACAACAATAGTAGCAGAAATTCACCATTGATGTTGGGTTTACCAAGTCCAGGTTCAGGTGGACCTCCGGAGAGTCCAATGGAGGGTAGTCCACTTGCGAGTCCACTAGCACCATTAATGGATCCAGCACATATACCAAGCAGTGTGGAAGTTGGAATTGGTGTTGGTGGTATGACGTATAAACCGCAACGTAGCTACGTTAGTCCGCGAccggaaaatatatttcaagaagACATCGCCGATTTGGTGAAAAGCTCGCATACCGGTCACAGGGACAAGGACAAAGTACCAGTGAAACTTGAACCATTCGCGGATTCACGTAGTGAGCAGTAA
- Protein Sequence
- MVRAQAKLLESSHAWLGASTSNISDSYQYQLQSLWQKCWNTNSSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGAIKEEPTPIYPSLANYACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAQSHQHEMIATNLSANFQAAVQVSQHHLNNNSSTSNNNNSSRNSPLMLGLPSPGSGGPPESPMEGSPLASPLAPLMDPAHIPSSVEVGIGVGGMTYKPQRSYVSPRPENIFQEDIADLVKSSHTGHRDKDKVPVKLEPFADSRSEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01207266;
- 90% Identity
- iTF_01129256;
- 80% Identity
- -