Oobs032655.1
Basic Information
- Insect
- Ophion obscuratus
- Gene Symbol
- tfip11
- Assembly
- GCA_964007375.1
- Location
- OZ023322.1:36614665-36617650[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-96 3.2e-92 310.2 15.1 1 275 430 697 430 697 0.98 2 2 0.015 3e+02 1.9 0.2 242 272 709 739 700 742 0.84
Sequence Information
- Coding Sequence
- aTGTCTGAGGATGAAGTGGAAAGTTTCGAAATAACGGACTACGATTTGGAAAATGAATTCAATATTAATCGACCGCGGCGGAAGCTCACGAAGCAGCAACAGATGCTCGGGGTGTGGGCTGACGATAGTGACGAGGAACGACCGACCGCCGGACAATCAAAGAATTTCAATAAGGGGCCAAAGAATTATACGGCACCGGTGAATTTTGTGGCTGGTGGGATTCAGCAGTCGGGCAAAACCGATCGTAAAAAAGAGGATGACGATGAGGACAAAGACGGGGACGACGAGGACAACGAAGGTGACAACGAAGAcgctgatgacgatgacgacgacgatacCCGGAGAGCCCGAAGGGGCGACGACGATTATGTACCCAACAGCTCAAGCGATTCGGAAGAGGAGACGATAAGTAACCAGAGGGCGAGAGTGTCCTTCTCGTCCGACACGCACGGAGATATCGCCGGAATGAGACGAAAAGGTGGCTCGATAAATCCGGCCTTGATCAAGAGAGGAGTGGGTAGCTGGGAAGTACATACCAGAGGTATCGGCGCCAAACTGCTGTTGCAGATGGGCTTCGAGCCTGGCAAAGGGCTGGGCAAAAAGCTCCAGGGTATAAGCGCCCCTGTGGAGGCCCACTTGCGAAGGGGAAGAGGCGCCATAGGGGCCTACGGCCCGGAAAAGTTGGCCAAAATTCCTGAGAAAAAGAAGGACGAGGAGGCCGAAGAGACCAAAGAATTTAAAGGAAAATTATCTCAGTGGCGAAAAGGTGGTGGCTGCGGCGGAGGCGACGTCCTTGCCACTGCCACCACTAACAACGCCGCTGCTAAAAGGAAGGTGCGATATCATTATCGGAGCGTCGATCAAGTGTTGGAGGACGGAAAAACAATGGGAAACAGGAAAGTATGTGCGAGCAGCGACATGAGCAGAGTAAAGGTGATAGACATGACAGGGCCGGAGCAACGGGTTCTCAGTGGATATCACGCGATCGCGAGTGGTCATAAACGTCCGGACAGCACGTCGCTCGCGCACGTCGACAAGACGATAAGCTCGGGCTACTTTGAGCTGCCCGAGCTTCGGCACAATCTGAATTTATTGGTCGACATGTGCGAACAGAATATCATACAGAACGACAGACGAACGCGCAACTTGAGCGATCGATCAGTGGCACTCGAGGCCGAGAGAAAGAACATTACAAAAGCTGTTGGTCAGCAGGAGCGATTGATCGATACACTCGAGAAGGTGGTCGCGATCGTCGAAAAACTTGTCGATCGGAACGACTCTACAGCCCTCGGGGAAACCGCAGaagccttcaaaaaattacaaaacgatTATTACGAGGAGTACAAGCTCTACGAATTGGGCGATTTGGCGAATAGTTTCGTTGCGCCGAAATTAAAGGACAGCCTCGCGACCTGGAATCCTCTCGTCCGGCCGAAACAGCCGATCGGTCTGATCAAAGAGTGGAAGGACATTCTCGAGGTTGGTAGCAGCGCGCTGCAGTCGCGTGAAATGCGACCGTACGATCAGTTGATCTGGAACGCTTGGATGCCGTCTATTCGCGGGGCAGTACAAGAATGGACATGCAGACAGCCCGAGCCGTTGATCGAACTCATAGAGGATTGGATGCCGCTACTTCCGGCATggattttggaaaatatctTGGACCTCGTGGTACTTCCAAAATTGACGCTCGAGGTCGAGGAATGGAATCCGCAAACGGACACGGTGCCCATTCATACGTGGATTCATCCTTGGTTGCCGATAATGCGCAATCGCATGGACACGTTGATTTACCCGATAATCCGTCGGAAACTGGGTTCGGCGTTGGGCAGTTGGCACCCGTCGGATAGAACAGCTCGTTTGATACTTCAGCCTTGGTCTCAAGTTTTCTCCAAGGGCGACATGGAAGCTTTTCTCGTGAAAAATATCCTTCCGAAGCTCCAAgtgacactttccgaatttgtCATTAATCCCCATCAGCAATATTTGGATCAGTGGAATTGGGTATACGAGTGGGCTACTTTGCTCCCGATACAAATAATGGTGGGCTTGTTGGACAAGTATTTCTTCCCAAAGTGGCTACAGGTGCTCGCTCTCTGGCTCAATCATTCGCCTAATTACACTCAAATAACGAACTGGTACGTGGGCTGGAAGGGCATGCTCAACAACAAATTATTGGCCGAGCCGGTCATCAAGGATTACTTCAAAAAAGCATTGGACATGATGAATCGCGCCGTATCGGCGCAACAGACTCACCAGCCGGGAGCAATGGAGCAAGTTTCGTATCTGACGAGTCTCGAACGAACGCAACCTATCGTCTCACAGATACCGGCGACAGCGCAGCCGAGAATTGAGAGACTCGCGGAGGCTGTGCGGACCGCATCGCAGATACCCCAAGGCTTCAAGGATCTTGTGCAGAAAAAATGCGAGGAACGCGGCATACTCTTCATGCCCATTCCCAATCGATATCGCGAGGCCAAACAAGTGTACAAAGTCGGCAACGTTCAGGCATACATCGAGGGAAATGTCCTCTTCGTTTGTCACAACGGGACGAATTGGGTACCGACGCACCTCAATGCTCTTCTCGATATGTCCGAGATCTAA
- Protein Sequence
- MSEDEVESFEITDYDLENEFNINRPRRKLTKQQQMLGVWADDSDEERPTAGQSKNFNKGPKNYTAPVNFVAGGIQQSGKTDRKKEDDDEDKDGDDEDNEGDNEDADDDDDDDTRRARRGDDDYVPNSSSDSEEETISNQRARVSFSSDTHGDIAGMRRKGGSINPALIKRGVGSWEVHTRGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAHLRRGRGAIGAYGPEKLAKIPEKKKDEEAEETKEFKGKLSQWRKGGGCGGGDVLATATTNNAAAKRKVRYHYRSVDQVLEDGKTMGNRKVCASSDMSRVKVIDMTGPEQRVLSGYHAIASGHKRPDSTSLAHVDKTISSGYFELPELRHNLNLLVDMCEQNIIQNDRRTRNLSDRSVALEAERKNITKAVGQQERLIDTLEKVVAIVEKLVDRNDSTALGETAEAFKKLQNDYYEEYKLYELGDLANSFVAPKLKDSLATWNPLVRPKQPIGLIKEWKDILEVGSSALQSREMRPYDQLIWNAWMPSIRGAVQEWTCRQPEPLIELIEDWMPLLPAWILENILDLVVLPKLTLEVEEWNPQTDTVPIHTWIHPWLPIMRNRMDTLIYPIIRRKLGSALGSWHPSDRTARLILQPWSQVFSKGDMEAFLVKNILPKLQVTLSEFVINPHQQYLDQWNWVYEWATLLPIQIMVGLLDKYFFPKWLQVLALWLNHSPNYTQITNWYVGWKGMLNNKLLAEPVIKDYFKKALDMMNRAVSAQQTHQPGAMEQVSYLTSLERTQPIVSQIPATAQPRIERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIEGNVLFVCHNGTNWVPTHLNALLDMSEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01101325; iTF_01102048; iTF_01100585; iTF_01100586; iTF_01100587; iTF_00798572; iTF_01306452; iTF_01103548; iTF_01129343;
- 90% Identity
- iTF_01103548;
- 80% Identity
- -