Oarm003286.1
Basic Information
- Insect
- Oxytorus armatus
- Gene Symbol
- tfip11
- Assembly
- GCA_958009045.1
- Location
- OY253745.1:22035912-22041634[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-97 7.6e-94 314.6 16.1 2 275 382 648 381 648 0.98 2 2 0.0076 53 3.5 0.1 243 273 661 691 653 693 0.88
Sequence Information
- Coding Sequence
- atgtccGAGGACGAAGTGGAGAGTTTTGAAATAACCGATTATGATTTGGACAATGAATTTAACATTAATCGACCTCGGCGAAAGCTCACTAAGCAGCAACAAATGCTTGGTATATGGGCCGATGACAGTGATGAAGAGCAACCAACAGCAAGACAAtccaaagttttcaacaaaGGTCCAAAAAATTATACTGCACCTGTTAATTTTGTGGCTGGTGGAATTCAGCAGTCAGGAAAACCTAAAGCAGAACAGAAGAatgaagaggaggaggaggaggccgAAGAGGAGGCATATGAGGACGACGACACACGAAGACCCAGAAGAGGAGACGACGATTATGTGCCAAATAGCTCTAGTGATTCGGAAGGTGAGGCGATCAGTAATGCAAAAGCCAGACCGTCGTTTTCCACGAATATGCAAGGTGACATAGCGGGCATGAGGCGAAAGGGTGGTCCCATTAATCCAGCTTTGATAAAGACCGGAGTTGGTAGTTGGGAGGTACACACGCGAGGAATCGGAGCTAAACTCTTGCTGCAAATGGGTTTTGAGCCTGGCAAAGGTTTGGGCAAGAAGTTACAGGGTATAAGCGCACCGGTCGAGGCTCATTTGAGAAAAGGACGCGGCGCTATTGGTGCCTATGGTCCAGAGAAATTGGCAAAAATTCCGGAAATAACGAAGGACGAGGACGTCGAAGAGACGAAGGAGTTCAAAGTGAAATTGTCACAGTGGCGCAAGGCGGATGGTGCCAGTAGTAATGCTAAGAAGAAAGTACGTTACCACTATCGTAGCGTCAATCAGGTATTGGAGGATGGTAAAACGAGACCTCTTAGAAAGGTGGGCGTCGGCAGTGATCTTAGCAGAGTAAAGGTGATCGATATGACGGGTCCGGAGCAACGTGTACTTAGTGGTTATCACGCTATTGCGGGCGGTCAAAAGCGTCCTGACGACGCAATTACGACGACGGACAAGAGAGGATGGGGCAATTTTGAGTTACCCGAGCTACAGCATAATCTCAATTTGTTAGTTGACATGTGCGAACAGGATATCATTCGAAACGATCGTAGAACACGAAATATGAATGACAGAGTCAATGTACTTGAGATCGTCGACAAGCTCATGGACAACAATGACTCGATAGCGCTAAAAGAACCCGCCGAGGCTTTCAAAAAATTACAGAATAAATATTACGAGGAGTACAAACTTTACGAATTGGGCGATTTAGCGAGTAGTTTTGTTGCACCAAAATTAAAAGATAATCTTGCCAATTGGAATTCATTGGCGCAACCGAAACAACCGTTGAACCTCGTCAAAGAGTGGAAGGATATTCTTGAGACCGGAAGTGGTACACTACAGTCGAGAAATATGCAACCGTACGATCAACTTATCTGGAACGCTTGGATGCCATCGATACGCGGTGCGGTACAAGAATGGACTTGCAGACAACCCGATCCTTTGATCGAATTGATAGAGGATTGGATGCCTTTGTTACCGGCATGGATATTGGAAAATATCTTGGATCTCTTAATACTTCCGAAATTGACCCTCGACGTTGAAGAGTGGAATCCATTGACAGACACAGTGCCAATTCACACTTGGATACATCCCTGGCTGCCGATAATGCGAAACCGTATGGACACCCTTATTTATCCGATAATACGTCGTAAATTGGGTTCGGCGTTAGGTGGTTGGCATCCGTCGGATAGATCAGCGAGATTGATGCTACAGCCATGGTGTCAAGTGTTCGCGAAAGGCGATATGGAAGCTTTTCTCGTTAAAAATATCGTTCCGAAGCTTCAAATCGCCCTCTCCGAATTCGTCATAAATCCGCATCAGCAACACCTGGATCAGTGGAATTGGGTTTACGAATGGGCAACTTTGTTACCGATACAAATAATGGTCGGTCTAttggacaaatttttctttccaaagtggCTTCAGGTACTGGCACTTTGGCTCAATCATTCGCCGAATTACGATCAAATTACGAATTGGTACATGGGCTGGAAGGGTATGCTGAATGACAAATTATTGGCCGAACCGGTTGTCAAAGaTTACTTCAAAAAGGCATTGGATATGATGAATCGAGCTGTAGCGACACCCCAGCCTCATCAACCAGGAGCAATGGAGCAAGTTTCGTATCTGACGAGTTTGGAACGAACTCAGCCTACAATGTCGCAAATACCAGCGACCGTACAACCGAGAATCGAGAGACTCGCGGAAGCAGTACGTACGGCATCGCAGATACCACAGGGTTTCAAGGATCTCGTGCAGAAAAAGTGCGAGGAACGGGGCATACTTTTTATGCCTATACCCAATCGATATCGCGAGGCAAAACAAGTCTACAAAGTGGGCAACGTTCAGGCGTACATCGAGGGAAGCGTTTTGTTCGTTTGTCACAATGGCACGAGTTGGATACCGACACACTTGAACGCTCTTCTCGACATGTCCGAGATGTGA
- Protein Sequence
- MSEDEVESFEITDYDLDNEFNINRPRRKLTKQQQMLGIWADDSDEEQPTARQSKVFNKGPKNYTAPVNFVAGGIQQSGKPKAEQKNEEEEEEAEEEAYEDDDTRRPRRGDDDYVPNSSSDSEGEAISNAKARPSFSTNMQGDIAGMRRKGGPINPALIKTGVGSWEVHTRGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAHLRKGRGAIGAYGPEKLAKIPEITKDEDVEETKEFKVKLSQWRKADGASSNAKKKVRYHYRSVNQVLEDGKTRPLRKVGVGSDLSRVKVIDMTGPEQRVLSGYHAIAGGQKRPDDAITTTDKRGWGNFELPELQHNLNLLVDMCEQDIIRNDRRTRNMNDRVNVLEIVDKLMDNNDSIALKEPAEAFKKLQNKYYEEYKLYELGDLASSFVAPKLKDNLANWNSLAQPKQPLNLVKEWKDILETGSGTLQSRNMQPYDQLIWNAWMPSIRGAVQEWTCRQPDPLIELIEDWMPLLPAWILENILDLLILPKLTLDVEEWNPLTDTVPIHTWIHPWLPIMRNRMDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWCQVFAKGDMEAFLVKNIVPKLQIALSEFVINPHQQHLDQWNWVYEWATLLPIQIMVGLLDKFFFPKWLQVLALWLNHSPNYDQITNWYMGWKGMLNDKLLAEPVVKDYFKKALDMMNRAVATPQPHQPGAMEQVSYLTSLERTQPTMSQIPATVQPRIERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIEGSVLFVCHNGTSWIPTHLNALLDMSEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01102792;
- 90% Identity
- iTF_01129342;
- 80% Identity
- -