Ocos022191.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ophion costatus
Gene Symbol
tfip11
Assembly
GCA_951751655.1
Location
OX632366.1:23877865-23880878[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-94 8e-91 305.0 16.3 1 275 411 678 411 678 0.98
2 2 0.026 1.7e+02 2.2 0.0 242 272 690 720 682 735 0.75

Sequence Information

Coding Sequence
atGTCGGAAGACGAAGTGGAACGTTTCGAAATAACGGATTATGATTTGGACAATGAATTCAATATTAATCGACCACGGCGAAAGCTGACGAAGCAGCAGCAGATGCTCGGGGTGTGGGCCGACGACAGTGACGAGGAACGACCGACTGCTGGGCAATCGAAGAATTTCAACAAGGGGCCAAAGAATTATACGGCACCGATGAATTTTGTGGCTGGTGGAATTCAGCAGTCGGGAAAACCTGAGCGGAAAAAaggcgacgacgaggacaaagACGGTGATGACGAGGATGGCGAAGGTGACAACGAAGATgccaacgacaacgacgacgatacCCGCAGAGCCCGAAGGGGCGACGATGATTATGTGCCTAACAGCTCAAGCGACTCGGAGGAGGAAACGATAAGCAACGAGAGGGTAAGAGCGTCCTTCTCATCTGACGCGCACGGAGATATCGCCGGAATGAGACGAAAAGGCGGGCCGATAAATCCAGCCTTGATCAAGAGCGGAGTGGGTAGCTGGGAAGTACACACCAGAGGTATCGGCGCCAAGCTACTGTTGCAGATGGGTTTCGAGCCTGGTAAAGGTCTGGGCAAAAAGCTCCAGGGCATAAGCGCCCCTGTAGAGGCCCACTTGCGAAGGGGAAGAGGCGCCATAGGGGCCTATGGCCCAGAAAAGTTGGCCAAAATTCCTGAGAAAAAGAAGGACGAGGAGGCCGACGAGGCCAAAGAATTTAAAGGAAAATTGTCTCAGTGGCGAAAAGGTGGTGCTAAAAGGAAGGTGCGGTATCATTATCGGAGCGTCGATCAAGTGTTGGAGGATGGAAAAACAATGGTAAACAGGAAAGTCTGCGCGAGCAGTGACATGAGCAGAGTAAAGGTGATAGACATGACAGGACCGGAGCAAAGGGTTCTCAGTGGATATCACGCGATCGCTAGTGGTCAAAAACGTCCAGACAGCGCATCGCTTGCGCACGTCGACAAGACAAGAAGCTCGGGCTATTTCGAGCTACCCGAGCTCCGGCACAATCTTAATTTATTGGTCGACATGTGCGAACAGAATATCATACAGAACGACAGACGAACGCGCAATTTGAGTGATCGAGCGGTGGCACTCGAGGCTGAGAGAAAAAACGTAACGAAAGCCGTTGGTCAGCAGGAACAGCTGATCGATACACTCGAGAAGGTGGTCGCGATCGTCGAAAAACTTGTCGATCGGAACGACTCTACAGCCCTCGGGGAAACGGCAGAAGTCttcaaaaaattacaaaagGATCATTACGAGGAGTACAAGCTCTACGAGTTGGGCGATTTGGCGAATAGTTTCGTTGCGCCGAAATTAAAGGACAGCCTCGCGACATGGAATCCTCTCGTCCGGCCAAAACAGCCGATCGGTCTGATCAAAGAGTGGAAGGACATTCTCGAGGTTGGGAGCAGCGTGCTGCAGACACGCGAAATGCGACCGTACGATCAGTTGATCTGGAACGCTTGGATGCCGTCTGTGCGCGGGGCAGTACAAGAATGGACATGCAGACAGCCCGAGCCGTTGATTGAACTCATAGAGGATTGGATGCCCCTACTTCCGGCAtggattttggaaaatatcttGGACCTCGTGGTACTTCCAAAATTGACGCTCGAGGTCGAGGAATGGAATCCGCAAACGGACACGGTACCCATTCATACGTGGATTCACCCTTGGTTGCCGATAATGCGCAATCGCATGGACACATTGATTTATCCGATAATCCGTCGAAAACTGGGCTCGGCGTTGGGTAGTTGGCACCCGTCGGATAGAACGGCTCGTTTGATACTTCAGCCTTGGTCTCAAGTTTTCTCCAAGGGCGACATGGAAGCTTTTCTCGTGAAAAATATTCTTCCGAAGCTCCAAGTGACACTTTCCGAATTTGTCATTAATCCCCATCAGCAATATTTGGATCAGTGGAATTGGGTATACGAGTGGGTTAATTTGCTCCCGATACAAATAATGGTGGGCTTGTTGGACAAGTATTTCTTCCCAAAGTGGCTACAGGTGCTCGCTCTCTGGCTCAATCATTCGCCGAATTACGCTCAAATAACGAACTGGTACGTGGGCTGGAAGGGCATGCTCAACAACAAATTATTGGCCGAGCCGGTTATCAAAGATTACTTCAAAAAAGCATTGGACATGATGAATCGCGCCGTATCGGCGCCACAGACTCTCCAGCCGGGAGCAATGGAGCAAGTGTCGTATCTGACGAGTCTCGAACGAACGCAACCTACCGTCTCACAGATACCGGCAACGGCACAGCCGAGAATCGAGAGACTCGCGGAGGCTGTGCGGACTGCATCGCAGATACCCCAAGGCTTCAAGGATCTTGTGCAGAAAAAATGCGAGGAACGCGGCATACTCTTCATGCCCATCCCCAATCGATATCGCGAGGCCAAACAAGTGTACAAAGTAGGCAACGTTCAGGCATACATCGAGGGAAATGTCCTCTTTGTTTGTCACAACGGGACGAATTGGGTACCGACGCACCTCAATGCTCTTCTTGATATGTCCGAGATCTAA
Protein Sequence
MSEDEVERFEITDYDLDNEFNINRPRRKLTKQQQMLGVWADDSDEERPTAGQSKNFNKGPKNYTAPMNFVAGGIQQSGKPERKKGDDEDKDGDDEDGEGDNEDANDNDDDTRRARRGDDDYVPNSSSDSEEETISNERVRASFSSDAHGDIAGMRRKGGPINPALIKSGVGSWEVHTRGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAHLRRGRGAIGAYGPEKLAKIPEKKKDEEADEAKEFKGKLSQWRKGGAKRKVRYHYRSVDQVLEDGKTMVNRKVCASSDMSRVKVIDMTGPEQRVLSGYHAIASGQKRPDSASLAHVDKTRSSGYFELPELRHNLNLLVDMCEQNIIQNDRRTRNLSDRAVALEAERKNVTKAVGQQEQLIDTLEKVVAIVEKLVDRNDSTALGETAEVFKKLQKDHYEEYKLYELGDLANSFVAPKLKDSLATWNPLVRPKQPIGLIKEWKDILEVGSSVLQTREMRPYDQLIWNAWMPSVRGAVQEWTCRQPEPLIELIEDWMPLLPAWILENILDLVVLPKLTLEVEEWNPQTDTVPIHTWIHPWLPIMRNRMDTLIYPIIRRKLGSALGSWHPSDRTARLILQPWSQVFSKGDMEAFLVKNILPKLQVTLSEFVINPHQQYLDQWNWVYEWVNLLPIQIMVGLLDKYFFPKWLQVLALWLNHSPNYAQITNWYVGWKGMLNNKLLAEPVIKDYFKKALDMMNRAVSAPQTLQPGAMEQVSYLTSLERTQPTVSQIPATAQPRIERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIEGNVLFVCHNGTNWVPTHLNALLDMSEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01102792;
90% Identity
iTF_01100587;
80% Identity
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