Hami002827.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heteropelma amictum
Gene Symbol
tfip11
Assembly
GCA_959613375.1
Location
OY390721.1:5358023-5361985[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-97 4.2e-93 312.0 16.8 1 275 397 664 397 664 0.98
2 2 0.0027 26 4.4 0.1 243 273 677 707 669 709 0.88

Sequence Information

Coding Sequence
ATGTCAGACGATGAGATGGAAAGTTTCGAGATCACCGACTACGATTTGGACAACGAGTTCAACGTCAATCGTCCCCGGAGGAAGCTCACGAAGCAGCAGCAGATGCTCGGCATTTGGGCAGACGACAGCGACGAAGAGCATTCGACTCCGAGACAATCGAAAGTTTTTAACAAAGCGCCAAAAAATTACACGGCACCTGTGAATTTCGTTGCTGGAGGTATTCAACAGTCGGAAAAGTCCAAggtcgaacaaaaaaaagaagacgatgacgaggacgaggaggacgaaaaaaacgagggagacAGCGACCGCATCCCGAATAGCTCGAGCGAATCGGAGGCCGAGGCGACGGATAACACGAGAGCCAGACCGTCTTTTTCCATGAGCGCGCATGGCGAAATAGCCGGAATGAGAAGAAAGGGCGGCGCGTTGGATCCGACGCTGGCAAAGACGGGCGTCGGTACTTGGGAGGTTCACACGAGGGGAATCGGAGCGAAGCTACTTTTGCAAATGGGTTTCGAGCCAGGAAAGGGTTTGGGCAAGAAACTCCAGGGTATAAGCGCACCGGTCGAGGCCCATCTGCGAAGAGGCAGAGGCGCCATCGGAGCTTACGGCCctgaaaaattggcaaaaatacCGGAGAAACGAAAGGACGAAGATGCGGAGGAGACGAAAGAGTTCAAGGCCAAATTATCGCAGTGGCGGAAGACGGACGGTACCAACGTCAGTGCGAAAAAGAAGGTCCGGTATCATTATCGTAGCGTCGACCAGGTGTTggaagatggaaaaacgatgcccgagagaaaaatcggcGCTAGCAGCGACATGAGCAGGGTCAAGGTCATTGACATGACGGGTCCGGAGCAACGCGTACTCAGCGGCTATCACGCGATCGCGAGTGGTCAGAAACGGCCGGACGACAGTGTTACCGTTAGCGATAAGAGGACTTCCGGTTTCTTTGAGCTGCCCGAGCTCCGACATAACCTTGATCTGTTGGTCGACATGTGCGAACAGGATATCGTGCGGAACGACCGACGTTCGCGCAATCTCAGTGACAGAGTCGTCGCCCTCGAggccgagaggaaaaacattgCGAGAGCGGTAAACCAGCAGGAACAATTGATCAGCACGCTCGAGAATGTACTGTCGATCGTAGAAAGGCTCGTCGATCGTAACGACGCGATCGCTCTCAGCGAGACGGCCGAggctttcaaaaaattgcagaATCAGTATTACGAGGAATACAAACTTTACGAATTGGGCGACTTGGCCAATAGTTTCGTTGCTCCGAAATTGAAGGAGAGCTTGGCAAGCTGGAATCCTCTCGTACAACCGAAACAACCGATGAGACTCGTAAAGGAATGGAAGGACATTCTGGAGACCGGTTATGGTACGCTGCAGTCCAGAAATATGCAACCGTACGACCAATTGATTTGGAACGCCTGGATGCCGTCTATCCGCGGGGCAGTACGaGAATGGACTTGCAGACAACCCGAACAGCTGATTGAATTGATAGAGGACTGGATGCCGTTGCTTCCGGCGTGGATTCTAGAAAATATTTTAGATCTGATGATCCTTCCGAAATTAACACTCGAGGTTGAAGAATGGAACCCGCTGACCGACACCGTACCGATACACACGTGGATCCATCCGTGGTTACCGATAATGCGAAATCGCTTGGACACCCTCATTTATCCGATAATCCGACGGAAATTGGGTTCGGCATTGGGAGGATGGCATCCGTCGGATGGCTCGGCGCGACGGATGCTGCAACCTTGGTCGCAGGTATTCAACAAGGGCGACATGGAAGCttttctcgtgaaaaacattttaccgAAACTCCAGATAGCCCTTTCGGAATTCGTCATAAATCCCCATCAGCAGCATCTGGACCAGTGGAATTGGGTTTACGAATGGGCGACGCTTTTGCCGATACAAATAATGGTCAGCTTGttggacaaatttttctttccgaaatGGCTACGCGTATTGGCGCTGTGGCTCAATCATTCGCCGAATTACGACCAAATAACCAACTGGTACATGGGCTGGAAGGGCATGCTCAGTGATAAGCTTTTGGCGGAACCAATCATCAAGGATTACTTCAAAAAAGCGCTGGACATGATGAATCGAGCGGTGGCCAACCCACAGGCGCACCAGCCGGGAGCGATGGAGCAAGTCTCGTATCTCACGAGTTTGGAACGAACGCAGCCGACTTTATCGCAGATACCGGCGACAGCGCAGCCGAGAATCGAGAGGCTCGCGGAGGCTGTGCGTACCGCGTCGCAAATACCGCAGGGTTTCAAGGATCTCGTGCAGAAGAAATGCGAGGAACGGGGAATACTATTTATGCCGATACCCAACAGATATCGCGAGGCTAAACAAGTTTACAGAGTCGGCAATGTTCAGGCGTACATCGAAGGAAGCGTCCTGTTCGTTTGTCACAACGGCACGAATTGGGTCCCGACCCATCTGAACGCCCTTCTCGACATGGCCGAGCTGTAA
Protein Sequence
MSDDEMESFEITDYDLDNEFNVNRPRRKLTKQQQMLGIWADDSDEEHSTPRQSKVFNKAPKNYTAPVNFVAGGIQQSEKSKVEQKKEDDDEDEEDEKNEGDSDRIPNSSSESEAEATDNTRARPSFSMSAHGEIAGMRRKGGALDPTLAKTGVGTWEVHTRGIGAKLLLQMGFEPGKGLGKKLQGISAPVEAHLRRGRGAIGAYGPEKLAKIPEKRKDEDAEETKEFKAKLSQWRKTDGTNVSAKKKVRYHYRSVDQVLEDGKTMPERKIGASSDMSRVKVIDMTGPEQRVLSGYHAIASGQKRPDDSVTVSDKRTSGFFELPELRHNLDLLVDMCEQDIVRNDRRSRNLSDRVVALEAERKNIARAVNQQEQLISTLENVLSIVERLVDRNDAIALSETAEAFKKLQNQYYEEYKLYELGDLANSFVAPKLKESLASWNPLVQPKQPMRLVKEWKDILETGYGTLQSRNMQPYDQLIWNAWMPSIRGAVREWTCRQPEQLIELIEDWMPLLPAWILENILDLMILPKLTLEVEEWNPLTDTVPIHTWIHPWLPIMRNRLDTLIYPIIRRKLGSALGGWHPSDGSARRMLQPWSQVFNKGDMEAFLVKNILPKLQIALSEFVINPHQQHLDQWNWVYEWATLLPIQIMVSLLDKFFFPKWLRVLALWLNHSPNYDQITNWYMGWKGMLSDKLLAEPIIKDYFKKALDMMNRAVANPQAHQPGAMEQVSYLTSLERTQPTLSQIPATAQPRIERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYRVGNVQAYIEGSVLFVCHNGTNWVPTHLNALLDMAEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01102792;
90% Identity
-
80% Identity
-