Ocos022274.1
Basic Information
- Insect
- Ophion costatus
- Gene Symbol
- tfip11
- Assembly
- GCA_951751655.1
- Location
- OX632366.1:25890878-25893882[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-93 5.2e-89 299.0 18.2 3 275 354 619 352 619 0.98 2 2 0.19 1.2e+03 -0.7 0.0 248 272 637 661 627 664 0.85
Sequence Information
- Coding Sequence
- atGGAAGACGAAGTGGAACGTTTCGAAATAACGGATTATGATTTGGACAACGAATTCAATATTAATCGACCACGGCGAAAGCTGACGAAGCAGCAACAGATGCTCGGTGTGTGGGCCGACGACAGTGACGAGGAACGAGCGACTGCTGGGCAATCGAAGAATTTCAACAAGGGGCCAAAGAATTATACGGCACCGATGAATTTTGTGGCTGGTGGAATTCAGCAGTCGGGAAAAACTGAGCGGAAAAAAGGCGATGACGAGGACAAAGACGGGGATGACGATGATGGCGAAGGTGACAACGAAGATgccaacgacaacgacgacgataaCCGCAGAGCCCGAAGGGGTGACGATGATTATGTGCCTAACAGCTCAAGCGACTCGGAGGAGGAAACGATAAGCAACGAGAGGGTAAGAGCGTCCTTCTCATCTGACGCGCACGGAGATATCGCTGGAATGAGACGAAAAGGCGGGCTGATAAATCCAGCCTTGATCAAGAGCGGAGTGGGTAGCTGGGAAGTACACACCAGAGGTGGTGGTTGCGGCGGAGGCGACGGCCTTGCCACTGCCACCAATAACAATGCTGCAGCTAAAAGGAAGGTGCGGTATCATTATCGGAGCGTCGATCAAGTGTTGGAGGATGGAAAAACAATGGTAAACAGGAAAGTCTGCGCGAGCAGTGACATGAGCAGAGTAAAGGTGATAGACATGACAGGGCCGGAACAAAGGGTTCTCAGTGGATATCACGCGATCGCTAGTGGTCAAAAACGTCCAGACAGAGCATCGCTTGCGCACGTCGACAAGACAAGAAGCTCGGGCTATTTCGAGCTACCCGAGCTTCGGCACAATCTGAATTTATTGGTCGACATGTGCGAACAGAATATCATACAGAACGACAGACGAACGCGCAATTTGAGTGATCGAGCGGTGGCACTCGAGGCTGAGAGAAAAAACGTAGCGAAGGCGGTTGGTCAGCAGGAACAGCTGATCGATACACTCGAGAAGGTGGTCGCGATCGTCGAAAAACTTGTCGATCGGAACGACTCTACAGCCTTCGGGGAAACCGcagaagttttcaaaaaattacaaaagGATCATTACGAGGAGTACCAGCTCTACGAATTGGGCGATTTGGCGAATAGTTTCGTTGCGCCGAAATTAAAGGACAGCCTCGCGACATGGAAACCTCTCGTCCGGCCAAAACAGCCGATCGATCTGATCAAAGAGTGGAAGGACATTCTCGAGGTTGGGAGCAGCGCGCTGCAGACACGCGAAATGCGACCGTACGATCAGTTGATCTGGAACGCTTGGATGCCGTCTGTGCGCGGGGCAGTACAAGAATGGACATGCAGTCAGCCCGAGCCGTTCATTGAACTCATAGAGGATTGGATGCCCCTACTTCCGGCAtggattttggaaaatatcttGGACCTCGTGGTACTTCCAAAATTGACGCTCGAGGTCGAGGAATGGAATCCGCAAACGGACACGCTGCCCATTCATACGTGGATTCACCCTTGGTTGCCGATAATGCGCAATCGCATGGACACATTGATTTATCCGATAATCCGTCGAAAACTGGGCTCGGCGTTGAGCAGTTGGCACCTGTCGGATAGAACGGCTCGTTTGATACTTCAGCCTTGGTCTCAAGTTTTCTCCAAGGGCGACATGGAAGCTTTTCTCGTGAAAAATATTCTTCCGAAGCTCCAAGTGACACTTTCCGAATTTGTCATTAATCCCCATCAGCAATATTTGGATCAGTGGAATTGGGTATACGAGTGGGTTACTTTGCTCCCGATACAAATAATGGTGGGCTTGTTGGACAAGTATTTCTTCCCAAAGTGGCTACAGGTGCTCGCTCTCTGGCTCAATCATTCGCCGAATTACGCTCAAATAACGAACGGGTACGTGGGCTGGAAGGGCATGCTCAACAACAAATTATTGGCCGAGCCGGTTATCAAAGATTACTTCAAAAAAGCATTGGACATGATGAATCGCGCCGTATCGGCGCCACAGACTCTCCAGCCGGGAGCAATGGAGCAAGTGTCGTATCTGACGAGTCTCGAACGAACGCAACCTACCGTCTCACAGATACCAGCAACGGCACAGCCGAGAATCGAGAGACTCGCGCAGGCTGTGCGGACTGCATCGCAGATACCCCAAGGCTTCAAGGATCTTGTGCAGAAAAAATGCGAGGAACGCGGCATACTCTTCATGCCCATCCCCAATCGATATCGCGAGGCCAAACAAGTGGAAATGTCCTCTTTGCTTTGTCACAACGGGACGAATTGGGTACCGTCGCACCTCAATGCTCTTCTCGATATGTCCGAGATCTAA
- Protein Sequence
- MEDEVERFEITDYDLDNEFNINRPRRKLTKQQQMLGVWADDSDEERATAGQSKNFNKGPKNYTAPMNFVAGGIQQSGKTERKKGDDEDKDGDDDDGEGDNEDANDNDDDNRRARRGDDDYVPNSSSDSEEETISNERVRASFSSDAHGDIAGMRRKGGLINPALIKSGVGSWEVHTRGGGCGGGDGLATATNNNAAAKRKVRYHYRSVDQVLEDGKTMVNRKVCASSDMSRVKVIDMTGPEQRVLSGYHAIASGQKRPDRASLAHVDKTRSSGYFELPELRHNLNLLVDMCEQNIIQNDRRTRNLSDRAVALEAERKNVAKAVGQQEQLIDTLEKVVAIVEKLVDRNDSTAFGETAEVFKKLQKDHYEEYQLYELGDLANSFVAPKLKDSLATWKPLVRPKQPIDLIKEWKDILEVGSSALQTREMRPYDQLIWNAWMPSVRGAVQEWTCSQPEPFIELIEDWMPLLPAWILENILDLVVLPKLTLEVEEWNPQTDTLPIHTWIHPWLPIMRNRMDTLIYPIIRRKLGSALSSWHLSDRTARLILQPWSQVFSKGDMEAFLVKNILPKLQVTLSEFVINPHQQYLDQWNWVYEWVTLLPIQIMVGLLDKYFFPKWLQVLALWLNHSPNYAQITNGYVGWKGMLNNKLLAEPVIKDYFKKALDMMNRAVSAPQTLQPGAMEQVSYLTSLERTQPTVSQIPATAQPRIERLAQAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVEMSSLLCHNGTNWVPSHLNALLDMSEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01102792;
- 90% Identity
- iTF_01100587;
- 80% Identity
- -