Oleu026134.1
Basic Information
- Insect
- Ochropleura leucogaster
- Gene Symbol
- -
- Assembly
- GCA_958449745.1
- Location
- OY288229.1:8845954-8857174[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-06 0.0072 16.7 0.0 7 35 46 73 42 78 0.88 2 2 0.025 21 5.6 0.0 7 34 203 229 200 240 0.84
Sequence Information
- Coding Sequence
- ATGGACCACGGCATACCTCTCAACATCCACGCTAGACCCCGTCTGGTGGGACGCAGACCGAACGAGATCGTGAACATAGAAACAGACGTTTTTCAAGAGAAATCCTATAAGCAGTATTCTTCGCAGCATTTGAGAGACGCCTTAATTGCTGTTAAGAAAGGCTACAGCGTTTATGCAGCGTCGAACAAGTATGGGGTCCCTCGAAAAACTTTGAGAAATTGGATGGAGAAATATGATATCAAAAGTCAGTTTTCGAAAGACTTCCCGATCGCTAACGTACAGTGTCAATACGATAGCCCGTCGGACACGGAACTGGACAAGCTGGGTCAGGTCCCCCGACCCCCGGACGATCACACGTACGACACGCGGGATGAACCGCCCGCGTTCATCATACGACATGTCAAtaatACACTGCACCTCCAAAGCCCACCTACACATTTTCGCGAGGTCCGGCCCAAGATCATGACGATAGGCCCCGGCTCCTCAGCTTCAGTCAATGTCATCCACGTGGGGGACCAGGTGCAGCCTCCTAGTATGCTGCTACCCTCGCAGCCATCAGAGTTCAGCATCAACAAGCGGATCCGACGGAGCGAGGTAGTGCTGCGTCAAGCCGCAGACTGTGTCAGTCGCGGACTGACATTCCAGACTGTTTCCGAACAGTTTAACATACCTATATCAACTATAAGATTTTTCATGGCCCGGAAAGGTATTCTACCGCGGCGCAGACGCGGGCGTAGTACTCAGCCTACTACTCGGCCGTGCAGTAGCCCCGAGCCTCCCTTCCACATGCAACACTTCAAACTACCTGACATGGTTGCCTTGAGAACTGACGATGATGATCAACCACCGCAGTAA
- Protein Sequence
- MDHGIPLNIHARPRLVGRRPNEIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKDFPIANVQCQYDSPSDTELDKLGQVPRPPDDHTYDTRDEPPAFIIRHVNNTLHLQSPPTHFREVRPKIMTIGPGSSASVNVIHVGDQVQPPSMLLPSQPSEFSINKRIRRSEVVLRQAADCVSRGLTFQTVSEQFNIPISTIRFFMARKGILPRRRRGRSTQPTTRPCSSPEPPFHMQHFKLPDMVALRTDDDDQPPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063524; iTF_00858486; iTF_00819100; iTF_01076421; iTF_01173227; iTF_01192654; iTF_00785943; iTF_00785142; iTF_00851740; iTF_00973727; iTF_00467360; iTF_00468120;
- 90% Identity
- iTF_00851740;
- 80% Identity
- -