Mper007024.1
Basic Information
- Insect
- Melanchra persicariae
- Gene Symbol
- -
- Assembly
- GCA_947386135.1
- Location
- OX376671.1:827291-844880[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-05 0.019 15.1 0.0 7 35 46 73 42 79 0.89 2 2 0.038 18 5.6 0.0 7 34 209 235 206 246 0.84
Sequence Information
- Coding Sequence
- ATGGAACATGGGATACCTCTAAACATCAACGCGAGACCTCGATTGGTAGGAAGAAGACCGAACGAGATAGTGAATATAGAAACTGACGTGTTTCAAGAGAAATCTTACAAACAATATTCGTCGCAACATCTTCGAGACGCCCTCATAGCTGTCAAAACAGGTTACAGTGTATACGCGGCATCAAATAAGTTCGGAGTCCCGAGAAAAACTTTGAGAAATTGGATGGAGAAGTATGATATTAAAAAACCTCACTACAACCATCTTCCAACAGATTTCCCGATCGCAAACGTGCAGTGCCAGTACGACAGCCCGTCCGACACGGAGACGGACCGGCACGGACACGCGCACGTCGCACGACCGCCGGACGATCACACGTACGACACGCGCGACGAACCGCCCGCGTTCATCATACGACAGATCAATAATACTCTACATCTCCAAAGCCCCCCTCACTTTCGAGAGATAAGGCCTAAGATCATGACGATAGGGCCCGGCTCTTCGGCATCAGTCAACGTCATACATGTGGGCGACCAGGCGCAGGCTGGCAATATGCTGCTCCCCTCGCAGCCCTCATCGGAGTTCAACATCAACAAGCGCATCCGTCGCAGCGAGGTAGTGTTGCGTCAGGCAGCCGACTGCGTCAGCCGGGGACTGACATTCCAGACTGTGTCAGAGCAGTTCAACATACCCATCTCTACTATACGATTCTTCATGGCACGGAAGGGTATTCTGCCGCGCCGTCGACGAGGGCGTTGCACTCAGCCAACGCGGCCCTGTAGTAGTCCAGAGCCTCCGTTCCACATGCAGCACTTCAAACTGCCCGACATGGTTGCACTAAGAGCCGAAGATGAAGACCCACAGCCTCAGTAA
- Protein Sequence
- MEHGIPLNINARPRLVGRRPNEIVNIETDVFQEKSYKQYSSQHLRDALIAVKTGYSVYAASNKFGVPRKTLRNWMEKYDIKKPHYNHLPTDFPIANVQCQYDSPSDTETDRHGHAHVARPPDDHTYDTRDEPPAFIIRQINNTLHLQSPPHFREIRPKIMTIGPGSSASVNVIHVGDQAQAGNMLLPSQPSSEFNINKRIRRSEVVLRQAADCVSRGLTFQTVSEQFNIPISTIRFFMARKGILPRRRRGRCTQPTRPCSSPEPPFHMQHFKLPDMVALRAEDEDPQPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01084198;
- 90% Identity
- iTF_00851740;
- 80% Identity
- -