Basic Information

Insect: Nomada ruficornis
Gene Symbol: -
Assembly: GCA_951802695.1
Location: OX637860.1:10324379-10329024[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.19 19 6.4 2.3 1 23 420 442 420 442 0.94

2 18 0.0012 0.12 13.3 0.7 2 23 477 498 476 498 0.98

3 18 8.5e-05 0.0087 16.9 0.9 1 23 609 631 609 631 0.96

4 18 0.00093 0.096 13.6 0.4 2 23 635 656 634 656 0.96

5 18 5.7 5.9e+02 1.7 0.3 1 19 737 755 737 757 0.80

6 18 0.0005 0.051 14.5 0.7 1 21 766 786 766 790 0.92

7 18 0.0029 0.29 12.1 3.4 2 23 868 889 867 889 0.95

8 18 0.00026 0.027 15.4 4.2 1 23 946 968 946 968 0.96

9 18 0.00033 0.034 15.1 0.7 1 20 973 992 973 994 0.94

10 18 0.049 5.1 8.2 0.5 2 23 1005 1026 1005 1026 0.97

11 18 3.4e-05 0.0035 18.2 0.6 2 23 1065 1086 1064 1086 0.97

12 18 3.1e-05 0.0031 18.3 1.6 1 23 1091 1113 1091 1113 0.95

13 18 0.00011 0.012 16.6 3.0 1 23 1119 1141 1119 1141 0.98

14 18 5.4e-06 0.00056 20.7 0.4 1 23 1157 1179 1157 1179 0.95

15 18 4.4e-07 4.5e-05 24.1 0.6 1 23 1185 1207 1185 1207 0.99

16 18 4.8e-05 0.0049 17.7 0.2 1 23 1213 1235 1213 1235 0.97

17 18 0.00018 0.018 15.9 4.1 1 23 1241 1263 1241 1263 0.96

18 18 0.013 1.3 10.1 0.4 1 20 1269 1288 1269 1290 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.19	19	6.4	2.3	1	23	420	442	420	442	0.94
2	18	0.0012	0.12	13.3	0.7	2	23	477	498	476	498	0.98
3	18	8.5e-05	0.0087	16.9	0.9	1	23	609	631	609	631	0.96
4	18	0.00093	0.096	13.6	0.4	2	23	635	656	634	656	0.96
5	18	5.7	5.9e+02	1.7	0.3	1	19	737	755	737	757	0.80
6	18	0.0005	0.051	14.5	0.7	1	21	766	786	766	790	0.92
7	18	0.0029	0.29	12.1	3.4	2	23	868	889	867	889	0.95
8	18	0.00026	0.027	15.4	4.2	1	23	946	968	946	968	0.96
9	18	0.00033	0.034	15.1	0.7	1	20	973	992	973	994	0.94
10	18	0.049	5.1	8.2	0.5	2	23	1005	1026	1005	1026	0.97
11	18	3.4e-05	0.0035	18.2	0.6	2	23	1065	1086	1064	1086	0.97
12	18	3.1e-05	0.0031	18.3	1.6	1	23	1091	1113	1091	1113	0.95
13	18	0.00011	0.012	16.6	3.0	1	23	1119	1141	1119	1141	0.98
14	18	5.4e-06	0.00056	20.7	0.4	1	23	1157	1179	1157	1179	0.95
15	18	4.4e-07	4.5e-05	24.1	0.6	1	23	1185	1207	1185	1207	0.99
16	18	4.8e-05	0.0049	17.7	0.2	1	23	1213	1235	1213	1235	0.97
17	18	0.00018	0.018	15.9	4.1	1	23	1241	1263	1241	1263	0.96
18	18	0.013	1.3	10.1	0.4	1	20	1269	1288	1269	1290	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGAGATAAATACGACTGTTTCGACACAAAACGAAGGGCAGGGCATCGTGTCGACGGTCGAAATATGCCGTGTTTGTCTCCTTGGGAACTTGGTGATGCGGGATTTGTTTCTCGAAAGCGAGGTCGCTTCACTTTCAGCAAAAGCGATGAGTTTCGCTAATGTAAAGATGTTACCTGGAGACGGCTTACCGACACATGTGTGTTGCGTATGCGCCGACAAACTGGAGTCTGCGTACGACTTTAAGTTACAGGTTGAACAGGCAGACACAGTTCTTAGGGAGAGATTCGTTACCATGCATATCAAAGAGGAGTTGTTTTTCGACGATGTTGAGGTACACTTGGAGTCCGGAGGGCAAAACGACAGTATCGGCGAGATGCAGGTGGAGGATCATTATCAAAGTTCTGCTGAGAGCCTCGCATCCATGTCTCAGGAGGAGAAAACGTCGCTTCTGAAGGATCAATTAGATTTGTTGCGAGTGGATAAGTTGGACGAGCAAGAGCAAGCGTTGAGAGAACAGAATAACAGCGCCATAATAGAGGAAGTAATCGTCCAAGCGATTCCCATGGAACAGCCATCGGAAGGCTGTCTAAATCAaggcgaggaagaagaagaagaacaagaaCAAGAAGAAGATTTGAAAAATGATGTAATGCTGAAACACGAGAACGGCGATTGTCTGGGAAGTATTCAAACTGTGGAACACGATTATATATTACACCAAGAGTGCGTGTTATCCAACGAACAGCAGCAAGAACATCAACAAGAGGAAGAAgggcagcagcaacagcagcagcaagGACAAGAACACGAAGGAgtagaggaagaggaggaggaggagatggaggaggaggaagagcaGGAGGAAggggaggaggaggaggaggaggaggaggaagaagtaGAAGTAGAAGTAGAAGAGGAagaacaacagcaacaacagtTGACCTCTGTAGAATCGTGTGAACGCGACGATTGCAATGAATACGTAAATTTGTTGGTAAAAGCAGGCGTCGCGACCAACCAAGGAGGTGAAGAGGAGACGGAAAAATTGAATGCTACGATGGTCGATGCTAAAGCTGAGTTACAGACACAGTGCCAAACCGAGAGCAGACGTAGTAAACGTAAGCTAGTTCGGCGTAATCTCGAAACGGACCGAGATTCCGACgaggaaaattatttcgaGAATTTGAATTTAAGTTCGCGACTGAAGAAAACGCCGATCTCTAATAAATcggagaaaatattttttttatgttacTTGTGCgataaagaatttttatcgaaaaaCGTTTTAAAGGAACATATGCATTCGCACGAAGAAGTACGAAGAGCTCTTTCATTGAAGAAAAACGTTGACACACCGCAAAAGAGTGCGAGCACCGTCGCAAAGTCACCCCCATCGGGTAAAAGATCGAACAAGTGTCCGTACTGCGGCAagcaatatatatatataatctCGTATAGTAAGCATTTGAAAAAACacgagagggagaaagaggcGGGAAAGGAGGAGACAATGCCCCTCGAAATCTCGTTTCACGAAGATGAACACAGTTTAGATCTAGACGATTACGAGGAGGAACGCCGCCATTTGGATGGGGAATTTCCTCTCCGGAAGAGAGGAAAACAGAAAAGGGAAGGCGAAGGGATCGCGAAGATAGGTAGAGAGGTGATGAAGGAAGAGATAGAGGATCAGCTGGAGGATGAAAGTGAGGGGAGGAGAAACGGGAGAGAGGGAGTACAGGAGGACGATAGCGAGGATAATTTGTCTAGGGAAGGAGAATTGGAGGTTTGCTGCGGCCGCAGAAAAATGTTTGCGTGCGAGAAATGCCCGGAGAAATTTGAGAGGAAGCGCAGTTTACGGAAACATGAGATTTCGCATGCCACGCTCAAGTGTAACGTATGCGAGGAGGAGTTTGAGTCGCTGGAAAAATTacggaagcatcgaatggggCACGTTGTCGAAGGCGTGTTAACTGGGCAGGATCTCGAAGCGGATAGGGATAGGGACAGGGACAGGGATAAGGATAAAGAAAGCGAGTCGGCCAAGGATGCTAGCGGTTATGAGAGCGGAGTGAAAGAGTGTGTGGGAAACGAGGGAGGAGCAGCAGTAACGGTCGCAACAGGAGGGTCGTTGGAGTGCGAGGGTACAGACAGAAACATCGAGTcccatcgtcgtcgtcattCCCAGGTCGACTACAGCTGCAAAGTGGGCTGCCAACGGTTCGCTAGCAAGGATCTGTTCCAGAGGCACGCCGAGCAACCGCAGGAACGTTTCAAACCTTACAAGTGCACGCAGTGCAACAAAACGTTTGGGAACGAACTTACGTTACGCAATCATTTGATAGCTACCAATCATAAAACGTTCGTCCACGGTGAAGAATACGACCCGAATAAACGGATTAAAAGGGTCGCCGCGAGGGCGGCGCAAAAAATCATCGACAAAATTAAAACTGAGGACGGTTTGGAGGATTACGACGACGAGGAGGATAACGAGGATCGTGGTAATACCGCGGATGGAAATTACGCTCGGAATAAGAATAGGCGAGACGTTTCCTCGCAGAGAAAGTACAATTACAAGAAGGAACTGGAATGCGCGAGTTGCAACAAGAGGTGCAGCTCGAAGCACGCTTTGGCAAAGCATATGGAGCAGCACGTGAAGGACGAGGAGCAACGGGCGACAAAGTCGGCCAAGCAAAAGCAGATTGCGGAGAAGAGAGAGCGGCAAAGAAACGGTGGTAACGCGGACCTCGACAGTGGGGACAAGAAGGATGACGATTACGATTCCGATTTCGAGAGTGGTTTAGATTGGCCGATGGACAATCACGAGTGCGCAAAGTGTAAGAAGCGATACAGCACGAAAAAGTCGTTGCTGCGCCATCAATTGTTGCACGAGGAGCCGAACTTTGAATGCGACATTTGTAACGTAAAATTTTACCGCAAGGACAAACTGAAAGCTCATTACGATAAATGCTCGGAGAAGAATCCCGATCAAGTGAGGAAGTGCAACATTTGTGGCGACAGTTTCGAAAACAACGAGATTCTGCGCGAACATAGATCGAAACATGTTACCGAAGGTATACTGACGGAGGAGGATTTGAGAGATATCGAGCCGCGGGCCGAGGAGAAGAAGCCGGGGGAGAAGATTGGTAGAAAGAGGAGAACCGATATCGTTGGTTTGGAGTGCACGGAATGCAACAAGCAGTACACGTCGAGGAAAGGCCTCCTTAGACATATACAAGTCCACGAGGGGAAAAAGTATTTGTGCGACATATGCCCGAAGAAATTTTATAGGCGCGAGCATTTAAAGATACACGTAGCCAAACACAACATGATCAAACCGTACAAGTGTACGCGTTGTACCAAACGTTTCATCAAAGAGGATCAGCTAACGAATCACTTGTCGAAGCACGACCGTACGTTCAAGAAGAACAAAGAGACGGATAGCTCGAAAAGATTTCTTTGCGAGATTTGTTCAAAGAGTTTCACGCAGTCTACCACGTTAATCGCTCATCTTAGAGCGCACAACGGTATAAAGCCGTACGTTTGCGAAGTATGCTCGCGCCCATTTACAACGAATGCTTATTTGAAAATGCATATGAGAACGCACACTCAAGAGCGACCATATATTTGTCAGTACTGTTCGCGAGCGTTCGCTCGAGCCGACACACTCGCTAATCATTTAACTTCGCATACAGGAGAAGCGAAATACCATTGCAAGTATTGCCCGAAAAATTTCCGCCGCCTCAAGTCCCTGAAGGAACACGTTTTCATTCATACCGGCCAAAGGCCTTACGCCTGTCCAACCTGCGATAGACGGTTCAACAATAACGGGAGTCGATACGCTCACAGTAAACGGTGCAAGCAAAACTTCCTTCAAAATCAGAATCAGAATCAGAATCAGATTCGAGGTCAAGCGTTAACCGCGCAAGTACAGCCGGTTCAAAATCAGCAACGAGTGCTGCAACAGGCCGCTGCTCTAGCTCAGGCTCAAGTGATTAAGgcacaaaatattaaaaccaTTACGATTACCAGGCAAACAGACGCAGTCGCAGCCGCAGCTCAACAAGCGGTTATGCAACATCAGGAGATACTGATGCCACTGATCCTTCCACTTACGGTTACTCTGGCAGATGTCGGTGAAGAAGTTATACTGCCGGAAGGaacgaaaatatttacaacCTCGTAA
Protein Sequence: MDAVEINTTVSTQNEGQGIVSTVEICRVCLLGNLVMRDLFLESEVASLSAKAMSFANVKMLPGDGLPTHVCCVCADKLESAYDFKLQVEQADTVLRERFVTMHIKEELFFDDVEVHLESGGQNDSIGEMQVEDHYQSSAESLASMSQEEKTSLLKDQLDLLRVDKLDEQEQALREQNNSAIIEEVIVQAIPMEQPSEGCLNQGEEEEEEQEQEEDLKNDVMLKHENGDCLGSIQTVEHDYILHQECVLSNEQQQEHQQEEEGQQQQQQQGQEHEGVEEEEEEEMEEEEEQEEGEEEEEEEEEEVEVEVEEEEQQQQQLTSVESCERDDCNEYVNLLVKAGVATNQGGEEETEKLNATMVDAKAELQTQCQTESRRSKRKLVRRNLETDRDSDEENYFENLNLSSRLKKTPISNKSEKIFFLCYLCDKEFLSKNVLKEHMHSHEEVRRALSLKKNVDTPQKSASTVAKSPPSGKRSNKCPYCGKQYIYIISYSKHLKKHEREKEAGKEETMPLEISFHEDEHSLDLDDYEEERRHLDGEFPLRKRGKQKREGEGIAKIGREVMKEEIEDQLEDESEGRRNGREGVQEDDSEDNLSREGELEVCCGRRKMFACEKCPEKFERKRSLRKHEISHATLKCNVCEEEFESLEKLRKHRMGHVVEGVLTGQDLEADRDRDRDRDKDKESESAKDASGYESGVKECVGNEGGAAVTVATGGSLECEGTDRNIESHRRRHSQVDYSCKVGCQRFASKDLFQRHAEQPQERFKPYKCTQCNKTFGNELTLRNHLIATNHKTFVHGEEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDEEDNEDRGNTADGNYARNKNRRDVSSQRKYNYKKELECASCNKRCSSKHALAKHMEQHVKDEEQRATKSAKQKQIAEKRERQRNGGNADLDSGDKKDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRAEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEDQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFLQNQNQNQNQIRGQALTAQVQPVQNQQRVLQQAAALAQAQVIKAQNIKTITITRQTDAVAAAAQQAVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069818;
90% Identity: iTF_01067755; iTF_01066411; iTF_01065720; iTF_01068440; iTF_01069818; iTF_01069118; iTF_01067084;
80% Identity: -