Basic Information

Insect: Nomada goodeniana
Gene Symbol: -
Assembly: GCA_963969485.1
Location: OZ018303.1:92976-97662[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.18 13 6.4 2.3 1 23 426 448 426 448 0.94

2 18 0.0012 0.084 13.3 0.7 2 23 483 504 482 504 0.98

3 18 0.00011 0.0081 16.5 1.0 1 23 614 636 614 636 0.97

4 18 0.029 2.1 8.9 0.2 2 23 640 661 639 661 0.96

5 18 5.4 4e+02 1.7 0.3 1 19 752 770 752 772 0.80

6 18 0.00048 0.035 14.5 0.7 1 21 781 801 781 805 0.92

7 18 0.0017 0.12 12.8 2.3 2 23 883 904 882 904 0.95

8 18 0.00025 0.018 15.4 4.2 1 23 961 983 961 983 0.96

9 18 0.00032 0.023 15.1 0.7 1 20 988 1007 988 1009 0.94

10 18 0.047 3.4 8.2 0.5 2 23 1020 1041 1020 1041 0.97

11 18 3.2e-05 0.0023 18.2 0.6 2 23 1080 1101 1079 1101 0.97

12 18 2.9e-05 0.0021 18.3 1.6 1 23 1106 1128 1106 1128 0.95

13 18 0.00011 0.0078 16.5 3.0 1 23 1134 1156 1134 1156 0.98

14 18 5.2e-06 0.00038 20.7 0.4 1 23 1172 1194 1172 1194 0.95

15 18 4.2e-07 3.1e-05 24.1 0.6 1 23 1200 1222 1200 1222 0.99

16 18 4.6e-05 0.0033 17.7 0.2 1 23 1228 1250 1228 1250 0.97

17 18 0.00017 0.012 15.9 4.1 1 23 1256 1278 1256 1278 0.96

18 18 0.012 0.87 10.1 0.4 1 20 1284 1303 1284 1305 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.18	13	6.4	2.3	1	23	426	448	426	448	0.94
2	18	0.0012	0.084	13.3	0.7	2	23	483	504	482	504	0.98
3	18	0.00011	0.0081	16.5	1.0	1	23	614	636	614	636	0.97
4	18	0.029	2.1	8.9	0.2	2	23	640	661	639	661	0.96
5	18	5.4	4e+02	1.7	0.3	1	19	752	770	752	772	0.80
6	18	0.00048	0.035	14.5	0.7	1	21	781	801	781	805	0.92
7	18	0.0017	0.12	12.8	2.3	2	23	883	904	882	904	0.95
8	18	0.00025	0.018	15.4	4.2	1	23	961	983	961	983	0.96
9	18	0.00032	0.023	15.1	0.7	1	20	988	1007	988	1009	0.94
10	18	0.047	3.4	8.2	0.5	2	23	1020	1041	1020	1041	0.97
11	18	3.2e-05	0.0023	18.2	0.6	2	23	1080	1101	1079	1101	0.97
12	18	2.9e-05	0.0021	18.3	1.6	1	23	1106	1128	1106	1128	0.95
13	18	0.00011	0.0078	16.5	3.0	1	23	1134	1156	1134	1156	0.98
14	18	5.2e-06	0.00038	20.7	0.4	1	23	1172	1194	1172	1194	0.95
15	18	4.2e-07	3.1e-05	24.1	0.6	1	23	1200	1222	1200	1222	0.99
16	18	4.6e-05	0.0033	17.7	0.2	1	23	1228	1250	1228	1250	0.97
17	18	0.00017	0.012	15.9	4.1	1	23	1256	1278	1256	1278	0.96
18	18	0.012	0.87	10.1	0.4	1	20	1284	1303	1284	1305	0.89

Sequence Information

Coding Sequence: ATGGACACCGTAGAGATAAATACGACTGTTTCGACACAAAATGAGGGGCAAGGCGTCGTGTCGACGGTCGAAATATGCCGTGTTTGCCTCCTCGGGAACTTGGTGATGCGGGATTTGTTTCTCGAAAGCGAGGTCGCTTCACTTTCAGCAAAAGCGATGAGTTTCGCTAATGTAAAGATGTTACCTGGAGATGGCCTACCGACACATGTGTGTTGCATGTGCGCCGACAAACTCGAGTCTGCGTACGACTTTAAGCTACAGGTTGAACAGGCAGACACAGTTCTTAGGGAGAGGTTTGTTACCATGCATATCAAGGAGGAGTTGTTTTTTGACGATGTTGAGGTACACTTGGAGTCGGGAGAGCAAAACGACAATATTGGCGAGATGCAGGTGGAGAATCATTATCAAAGTTCTGCAGAAAGCCTCACATCGATGTCTCAGGAGGAGAAAACGTCGCTTCTGAAGGATCAATTAGATTTGTTGCGAGTAGATAAGTTGGACGAGCAAGAGCAAGCGATGAGAGAACAGAATAACAGCGCCATAGTAGAGGAAGTAATCGTCCAAGCAATTCCCATGGAGCAGACATCAGAAAGCTGTCTAAATcaagacgaggaagaagaagaacaagaacaagaagaagaagatagtATTGGAGGCATAGCAgtagatttaaaaaatggtgTAATCCTGAAacacgaaaacgaaaatggcGACTGTCTGGGTAGTATTCAAACTGTGGAGCACGATTATATATTACACCAAGAGTGTATGTTATCCAATGAGCTGCAGCAAGAACAGCAACAAGAGGAAGAAggacagcagcagcagcaaggACAAGAAGACgaaggagaagaggaagaggaaggagaggaggaggaagaggaaggagaggaggaggaagaagaggaagaggaagaggaagaggaagaggaagaggaagaggaagaggaagaacaacagcaacaacagttGACATCTGTAGAATCGTGTGAGCGCGACGATTGCACTGAATACGTAAATTTGTTGGTAAAAGCAGCCGCCGCGACGAACCGGGGAGGCAAAGAGGAGACGGAAAAATTTAATGCTACGATGGTCGATGTTAAAGCTGAGTTACAGACACAGTTCCAAACCGAGAGCAGAAGAAGTAAACGTAAGCTAGTTCGGCGTAATCTTGAAACGGACCGAGATTCCGacgaggaaaattatttcgagaaTTTGAATTTAAGTTCGCGTCTAAAGAAAACGCCGGTCTTGAATAAATCGgagaaaattttttttttatgttatttGTGTGACAAAGAATTTTTGTCAAAAAACGTTTTAAAGGAACATATGCATTCGCACGAAGAAGTACGAAGAGCGCTTTCGTTGAAGAAAAACGTTGACACACCGCAAAATAGTGCGAGCACCGTCGCAAAGTCACCCCCATCGGGTAAAAGATCGAACAAGTGTCCGTACTGCGGcaagcaatatatatatataatctcGTATAGTAAGCATTTGAAAAAACATGAGAGGGAGAAGGAGGCGGGAAAGGAGGAGACAATGCCCCTGGAAATCTCGTTTCACGAGGATGAACACAGTTTAGATCTAGATGATTACGAAGAAGAACGCCGCCATTTGGATGGGGAATTTCCTCGCCGGAAGAGAGGAAAACAGAAAAGGGAAAGCGAAGATATCGCGAAGATAGGTAGAGAGGTGATGAAAGAAGAGGTAGAGGATCATCTGGGGAATGAAAATGAGAGGAGAAACGAGAGAGACGGAGTACACGTGGACGATAGTGAAGATAATTTGTCTAGGGAGGAAGAATTGGAGGTTTGCTGCGGCCGCAGAGAAATGTTTTCGTGCGAGAAATGCCCGGAGAAATTTGACAGAAAGCGCGGTTTACGGAAACATGAGATTTCGCATTTCACACTAAAGTGTAACGTATGCGAGGAGGAGTTGGAGTCGCTGGAAAAATTACGAAAGCATCGAATGGGGCACGTCGTCGAAGGCGTGTTAACTGAGCAGGATCTCGAAGCGGATAGGGATAGGAATGGGGATAGAGATAGGGATAGGGATAAGGATAAGGATAAGGACAAGGACAAAGAAAGCGAAGCGGCCAAAGATGCGAGCGGTTATGAGAGCGGAGTGAAAGAGTGTGtgggaaacgaggaagaagcaGCAGTAACTGTCGCGACAGGAGGGTCGTTGGAGTGCGAGGGTACAGACAGAAACATGGAGTcgcatcgtcgtcgtcattCCCAGATCGACTACAGCTGCAAAGTGGGCTGCCAACGGTTCGCTAGCAAGGATCTGTTCCAGAGGCACGCCGAGCAACAGCAGGAACGTTTCAAAGCTTACAAATGCACGCAATGCAACAAAACGTTTGGGAACGAACTTACGTTGCGCAATCATTTGATAGCTACCAATCATAGAACGTTCGTCCACGGTGAAGAATACGACCCCAATAAACGGATTAAAAGGGTCGCTGCGAGGGCGGCGCAAAAAATCATCGACAAAATTAAGACGGAGGACGGTCTGGAGGATtacgacgaggaggaggatgaCGAGGATCGTGGTAATACCGCGGATGGAAATTACGCTCGGAATAAGAATAGGCGAGACGTTTCCTCGCAGAGGAAGTACAATTACAAGAAGGAACTGGAATGTGCGAGTTGCAACAAGAGGTGCAGCTCGAAGCAATCTCTGGCAAAGCATATGGAGCAGCACGTGAAAGACGAGGAGCAACGGGCGACAAAGTCGGGCAAGCAAAAGCAAATCGCGGAGAAGAGAGAGCGGCAAAGAAACGGTGGTAACGCGGACCTCGACAGTGGGGATAAGAAGGATGACGATTACGATTCCGATTTCGAGAGTGGTTTAGATTGGCCGATGGACAATCACGAGTGCGCAAAGTGTAAGAAGCGATACAGCACGAAAAAGTCGTTGCTACGGCATCAATTGTTGCACGAGGAGCCAAACTTTGAATGCGACATTTGTAACGTGAAATTTTACCGCAAGGACAAACTGAAAGCTCATTACGATAAGTGCTCGGAGAAGAATCCTGATCAAGTGAGGAAGTGCAACATTTGTGGCGACAGTTTCGAAAACAACGAGATTCTGCGCGAACATAGATCGAAACATGTTACCGAAGGTATACTCACGGAGGAGGATTTGAGGGATATCGAACCGCGGGCCGAGGAGAAGAAACCGGGGGAGAAGATTGGTAGAAAGAGGAGAACCGATATCGTTGGTTTAGAGTGCACGGAATGTAACAAGCAGTACACGTCGAGGAAAGGCCTGCTTCGACATATACAAGTCCacgaggggaaaaaatatttgtgcgACATATGCCCGAAGAAATTTTACAGGCGCGAGCATTTGAAGATACACGTAGCCAAACACAACATGATTAAACCGTACAAGTGTACGCGTTGTACCAAACGTTTCATCAAAGAGGATCAATTAACGAATCACTTGTCGAAGCACGACCGTACGTTCAAAAAGAACAAAGAGACGGATAGCTCAAAAAGATTTCTTTGCGAGATTTGTTCAAAGAGTTTCACGCAGTCTACCACCTTAATCGCTCATCTTAGAGCGCACAACGGTATAAAACCGTACGTTTGCGAAGTATGTTCGCGCCCATTTACAACAAATGCTTATTTGAAAATGCATATGAGAACGCACACTCAAGAGCGACCATACATTTGCCAGTACTGTTCGCGAGCGTTCGCTCGAGCCGATACGCTCGCTAATCATTTAACATCGCATACGGGAGAAGCGAAATACCATTGCAAGTATTGCCCGAAAAATTTCCGCCGCCTCAAGTCCCTTAAGGAACACGTTTTCATTCATACCGGTCAGAGGCCTTACGCCTGTCCAACCTGCGATAGACGGTTCAACAATAACGGGAGTCGATACGCTCATAGTAAACGGTGCAAGCAAAATTTCCTTCAAAATCAGAATCAGAATCAGAATCAGAATCGAGGTCAAGCGTTGTCCACGCAAGTACAGCCGGTTCAAAATCAGCAACGGGTGCTGCAACAGGCCGCTGCTCTTGCTCAAGCTCAAGTGATTAAggcacaaaatattaaaaccaTTACGATTACCAGGCAAGGAGATGCAGTCGCAGCCGCAGCTCAACAAGCGGTTATGCAACATCAGGAGATACTGATGCCACTGATCCTTCCTCTTACGGTTACGCTTGCCGATGTCGGTGAAGAAGTTATACTCCCGgaaggaacgaaaatatttacaaccTCGTAA
Protein Sequence: MDTVEINTTVSTQNEGQGVVSTVEICRVCLLGNLVMRDLFLESEVASLSAKAMSFANVKMLPGDGLPTHVCCMCADKLESAYDFKLQVEQADTVLRERFVTMHIKEELFFDDVEVHLESGEQNDNIGEMQVENHYQSSAESLTSMSQEEKTSLLKDQLDLLRVDKLDEQEQAMREQNNSAIVEEVIVQAIPMEQTSESCLNQDEEEEEQEQEEEDSIGGIAVDLKNGVILKHENENGDCLGSIQTVEHDYILHQECMLSNELQQEQQQEEEGQQQQQGQEDEGEEEEEGEEEEEEGEEEEEEEEEEEEEEEEEEEEEEQQQQQLTSVESCERDDCTEYVNLLVKAAAATNRGGKEETEKFNATMVDVKAELQTQFQTESRRSKRKLVRRNLETDRDSDEENYFENLNLSSRLKKTPVLNKSEKIFFLCYLCDKEFLSKNVLKEHMHSHEEVRRALSLKKNVDTPQNSASTVAKSPPSGKRSNKCPYCGKQYIYIISYSKHLKKHEREKEAGKEETMPLEISFHEDEHSLDLDDYEEERRHLDGEFPRRKRGKQKRESEDIAKIGREVMKEEVEDHLGNENERRNERDGVHVDDSEDNLSREEELEVCCGRREMFSCEKCPEKFDRKRGLRKHEISHFTLKCNVCEEELESLEKLRKHRMGHVVEGVLTEQDLEADRDRNGDRDRDRDKDKDKDKDKESEAAKDASGYESGVKECVGNEEEAAVTVATGGSLECEGTDRNMESHRRRHSQIDYSCKVGCQRFASKDLFQRHAEQQQERFKAYKCTQCNKTFGNELTLRNHLIATNHRTFVHGEEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDEEEDDEDRGNTADGNYARNKNRRDVSSQRKYNYKKELECASCNKRCSSKQSLAKHMEQHVKDEEQRATKSGKQKQIAEKRERQRNGGNADLDSGDKKDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRAEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEDQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFLQNQNQNQNQNRGQALSTQVQPVQNQQRVLQQAAALAQAQVIKAQNIKTITITRQGDAVAAAAQQAVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069818;
90% Identity: iTF_01070517;
80% Identity: -