Basic Information

Insect: Nomada ferruginata
Gene Symbol: -
Assembly: GCA_963583965.1
Location: OY757228.1:86435-91113[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.17 19 6.4 2.3 1 23 435 457 435 457 0.94

2 18 0.0011 0.12 13.3 0.7 2 23 492 513 491 513 0.98

3 18 8e-05 0.0088 16.9 0.9 1 23 624 646 624 646 0.96

4 18 0.00087 0.096 13.6 0.4 2 23 650 671 649 671 0.96

5 18 5.3 5.8e+02 1.7 0.3 1 19 750 768 750 770 0.80

6 18 0.00044 0.049 14.6 0.7 1 21 779 799 779 803 0.92

7 18 0.0016 0.18 12.8 2.3 2 23 881 902 880 902 0.95

8 18 0.00024 0.027 15.4 4.2 1 23 959 981 959 981 0.96

9 18 0.00031 0.034 15.1 0.7 1 20 986 1005 986 1007 0.94

10 18 0.046 5 8.2 0.5 2 23 1018 1039 1018 1039 0.97

11 18 3.1e-05 0.0034 18.2 0.6 2 23 1078 1099 1077 1099 0.97

12 18 2.8e-05 0.0031 18.3 1.6 1 23 1104 1126 1104 1126 0.95

13 18 0.0001 0.011 16.5 3.0 1 23 1132 1154 1132 1154 0.98

14 18 5e-06 0.00055 20.7 0.4 1 23 1170 1192 1170 1192 0.95

15 18 4.1e-07 4.5e-05 24.1 0.6 1 23 1198 1220 1198 1220 0.99

16 18 4.4e-05 0.0049 17.7 0.2 1 23 1226 1248 1226 1248 0.97

17 18 0.00016 0.018 15.9 4.1 1 23 1254 1276 1254 1276 0.96

18 18 0.012 1.3 10.1 0.4 1 20 1282 1301 1282 1303 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.17	19	6.4	2.3	1	23	435	457	435	457	0.94
2	18	0.0011	0.12	13.3	0.7	2	23	492	513	491	513	0.98
3	18	8e-05	0.0088	16.9	0.9	1	23	624	646	624	646	0.96
4	18	0.00087	0.096	13.6	0.4	2	23	650	671	649	671	0.96
5	18	5.3	5.8e+02	1.7	0.3	1	19	750	768	750	770	0.80
6	18	0.00044	0.049	14.6	0.7	1	21	779	799	779	803	0.92
7	18	0.0016	0.18	12.8	2.3	2	23	881	902	880	902	0.95
8	18	0.00024	0.027	15.4	4.2	1	23	959	981	959	981	0.96
9	18	0.00031	0.034	15.1	0.7	1	20	986	1005	986	1007	0.94
10	18	0.046	5	8.2	0.5	2	23	1018	1039	1018	1039	0.97
11	18	3.1e-05	0.0034	18.2	0.6	2	23	1078	1099	1077	1099	0.97
12	18	2.8e-05	0.0031	18.3	1.6	1	23	1104	1126	1104	1126	0.95
13	18	0.0001	0.011	16.5	3.0	1	23	1132	1154	1132	1154	0.98
14	18	5e-06	0.00055	20.7	0.4	1	23	1170	1192	1170	1192	0.95
15	18	4.1e-07	4.5e-05	24.1	0.6	1	23	1198	1220	1198	1220	0.99
16	18	4.4e-05	0.0049	17.7	0.2	1	23	1226	1248	1226	1248	0.97
17	18	0.00016	0.018	15.9	4.1	1	23	1254	1276	1254	1276	0.96
18	18	0.012	1.3	10.1	0.4	1	20	1282	1301	1282	1303	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGAGATAAATACGACTGTTTCGAGACAAAACGAAGGGCAGGGCATCGTGTCGACGGTCGAAATATGCCGTGTTTGTCTCCTTGGGAACTTGGTGATGCGGGATTTGTTTCTCGAAAGCGAGGTCGCTTCACTTTCAGCAAAAGCGATGAGTTTCGCTAATGTAAAGATATTACCTGGAGACGGCTTACCGACACATGTGTGTTGCGTATGCGCCGACAAACTGGAGTCTGCGTACGACTTTAAGTTACAGGTTGAACAGGCAGACACAGTTCTTAGGGAGAGATTCGTTACCATGCATATCAAAGAGGAGTTGTTTTTCGACGATGTTGAGGTACACTTGGAGTCCGGAGGGCAAAACGACAGTATCGGCGAGATGCAGGTGGAGGATCATTATCAAAGTTCTGCAGAAAGCCTCGCATCCATGTCTCAGGAGGAGAAAACGGCGCTTCTGAAGGATCAATTAGATTTGTTGCGAGTGGATAAGTTGGACGAGCAAGAGCAAGCGATGAGAGAACAGAATAACAGCGCCATAATAGAGGAAGTAATCGTCCAAGCGATTCCCATGGAACAGCCATCGGAAGGCTGTCTAAATCAAggcgaggaagaagaagaagaagaagaagaagaacaagaacaagaagaacaagaagaacaagaagaacaagaagaacAAGAACAAGAACaagatttaaaaaatgatGTAATGCTGAAACACGAGAACAGCGATTGTCTGGGAAGTATTCAAACTGTGGAACACGATTATATATTACACCACGAGTGCGTGTTATCCAACGAACAGCAGGAAGAACATCAACAAGAGGAAGAagggcagcagcagcagcagcaaggACAAGAACACGAAGGggtagaggaagaagaggaggaagaggaggaagagcaGGAggcggaggaggaggaggaggaggaggaagaagaagaagaagaagaagaagaagtagaagaggaggaacaacagcaacaacagtTGACCTCTGTAGAATCGTGTGAACGCGACGATTGCAATGAATACGTAAATTTGTTGGTAAAAGCAGCCGTCGCGACGAACCAAGGAGGTGAAGAGGAGACGGAAAAATTGAATGCTACGATGGTCGATGTTAAAGCTGAGTTACAGACACAGTGCCAAACCGAGAGCAGACGTAGTAAACGTAAGCTAGCTCGGCGTAATCTTGAAACGGACCGAGATTCCGACGAGGAAAATTATTTCGAGAATTTGAATTTAAGTTCGCGACTGAAGAAAACGCCGATCTCTAATAAATCGgagaaaattttttttttatgttactTGTGCGACAAAGAATTTTTATCGAAAAACGTTTTAAAGGAACATATGCATTCGCACGAAGAAGTACGAAGAGCTCTTTCATTGAAGAAAAACGTTGACACACCGCAAAAGAGTGCGAGCACCGTCGCAAAGTCACCCCCATCGGGTAAAAGATCGAACAAGTGTCCGTACTGCGGCaagcaatatatatatataatctcGTATAGTAAGCATTTGAAAAAACACGAGAGGGAGAAAGAAGCGGGAAAGGAGCAGACAATGCCCCTCGAAATCTCGTTTCACGAAGATGAACACAGTTTAGATCTAGACGATTACGAGGAGGAACGCCGCCATTTGGATGGGGAATTACCTCTCCGGAAGAGAGGAAAACAGAAAAGGGAAGGCCAGGGGCTCGCGAAGATAGGTAGAGAGGGGATGAAGGAAGAGATAGAGGATCAGCTGGAGAATGAAAATGAGGAGAGGAGAAACGGGAGAGAGGGGGTACAGGAGGACGATAGCGAGGATAATTTGTCTAGGGAAGGAGAATGGGAGGTTTGCTGCGGCCGCAGAGAAATGTTTGCATGCGAGAAATGCCCGGAGAAATTTGACAGGAAGCGCAGTTTACGGAAACATGAGATTTCGCATGCCACGCTCAAGTGTAACGTATGCGAGGAGGAGTTTGAGTCGCTGGAAAAATTACGGAAGCATCGAATGGGGCACGTTGTCGAGGGCGTGTTAACTGGGCAGGATCTCGAAGCGGATAGGGATAGGGACAGGGATAAGGATAAAGAAAGCGAATCGGCCAAGGATGCGAGCGGTTATGAGAGCGGAGTGAAAGAGTGTGTGGGAAACGAGGGAGAAGCAGCAGTAACGGTCGCAACAGGAGGGTCGTTGGAGTGCGAGGGTACAGACAGAAACATCGAGTcccatcgtcgtcgtcattCCCAGGTCGACTACAGCTGCAAAGTGGGCTGCCAACGGTTCGCTAGCAAGGATCTGTTCCAGAGGCACGCCGAGCAACCGCAGGAACGTTTGAAAGCTTACAAGTGCACGCAGTGCAACAAAACGTTTGGCACCGAACTTACGTTGCGCAATCATTTGATAGCTACCAATCATAAAACGTTCGTCCACGGTGAAGAATACGACCCGAACAAACGGATTAAAAGGGTCGCTGCGAGGGCGGCGCAAAAAATCATCGACAAAATTAAAACGGAGGACGGTTTGGAGGATTACGACGACGAGGAGGATAACGAGGATCGTGGTAATACCGCGGATGGAAATTACGCTCGGAATAAGAATAGGCGAGACGTTTCCTCGCAGAGAAAGTACAATTACAAGAAGGAACTGGAATGCGCGAGTTGCAACAAGAGGTGCAGCTCGAAGCAATCTTTGGCAAAGCATATGGAGCAGCACGTGAAGGACGAGGAGCAACGGGCGACAAAGTCGGGCAAGCAAAAGCAGATTGCGGAGAAGAGAGAGCGGCAAAGAAACGGTGGTAACGCGGACCTCGACAGTGGGGACAAGAAAGATGACGATTACGATTCCGATTTCGAGAGTGGTTTAGATTGGCCGATGGACAATCACGAGTGCGCAAAGTGTAAGAAGCGATACAGCACGAAAAAGTCGTTGCTGCGGCATCAATTGTTGCACGAGGAGCCGAACTTTGAATGCGACATTTGTAACGTGAAATTTTACCGCAAGGACAAACTGAAAGCTCATTACGATAAATGCTCGGAGAAGAATCCCGATCAAGTGAGGAAGTGCAACATTTGTGGCGACAGTTTCGAAAACAACGAGATTCTGCGCGAACATAGATCGAAACATGTTACCGAAGGTATACTGACGGAGGAGGATTTGAGAGATATCGAGCCGCGGGCCGAGGAGAAGAAGCCGGGGGAGAAGATTGGTAGAAAGAGGAGAACCGATATCGTTGGTTTGGAGTGCACGGAATGCAACAAGCAGTACACGTCGAGGAAAGGCCTCCTTAGGCATATACAAGTCCACGAGGGGAAAAAGTATTTGTGCGACATATGCCCGAAGAAATTTTATAGGCGCGAGCATTTAAAGATACACGTAGCCAAACACAACATGATTAAACCGTACAAGTGTACGCGTTGTACCAAACGTTTCATCAAAGAGGATCAGCTAACGAATCACTTGTCGAAGCACGACCGTACGTTCAAGAAGAACAAAGAGACTGATAGCTCGAAAAGATTTCTTTGCGAGATTTGTTCAAAGAGTTTCACGCAGTCTACCACGTTAATCGCTCATCTTAGAGCGCACAACGGTATAAAGCCGTACGTTTGCGAAGTATGCTCGCGCCCATTTACAACGAATGCTTATTTGAAAATGCATATGAGAACGCACACTCAAGAGCGACCATATATTTGTCAGTACTGTTCGCGAGCGTTCGCTCGAGCCGACACACTCGCTAATCATTTAACTTCGCATACAGGAGAAGCGAAATACCATTGCAAGTATTGCCCGAAAAATTTCCGCCGCCTCAAGTCCCTTAAGGAGCACGTTTTCATTCATACCGGCCAAAGGCCTTACGCCTGCCCAACCTGCGATAGACGGTTCAACAATAACGGGAGTCGATACGCTCACAGTAAACGGTGCAAGCAAAACTTCCTTCAAAATCAGAATCAGAATCGAGGTCAAACGTTAACCGCGCAAGTACAGCCGGTTCAAAATCAGCAACGAGTGCTGCAACAGGCCGCTGCTCTAGCTCAGGCTCAAGTGATTAAggcacaaaatattaaaaccaTTACGATTACCAGGCAAACAGACGCAGTCGCAGCCGCAGCTCAACAAGCGGTTATGCAACATCAGGAGATACTGATGCCACTGATCCTTCCACTTACGGTTACTCTTGCAGATGTCGGTGAAGAAGTTATACTGCCGGAAGGaacgaaaatatttacaacCTCGTAA
Protein Sequence: MDAVEINTTVSRQNEGQGIVSTVEICRVCLLGNLVMRDLFLESEVASLSAKAMSFANVKILPGDGLPTHVCCVCADKLESAYDFKLQVEQADTVLRERFVTMHIKEELFFDDVEVHLESGGQNDSIGEMQVEDHYQSSAESLASMSQEEKTALLKDQLDLLRVDKLDEQEQAMREQNNSAIIEEVIVQAIPMEQPSEGCLNQGEEEEEEEEEEQEQEEQEEQEEQEEQEQEQDLKNDVMLKHENSDCLGSIQTVEHDYILHHECVLSNEQQEEHQQEEEGQQQQQQGQEHEGVEEEEEEEEEEQEAEEEEEEEEEEEEEEEEVEEEEQQQQQLTSVESCERDDCNEYVNLLVKAAVATNQGGEEETEKLNATMVDVKAELQTQCQTESRRSKRKLARRNLETDRDSDEENYFENLNLSSRLKKTPISNKSEKIFFLCYLCDKEFLSKNVLKEHMHSHEEVRRALSLKKNVDTPQKSASTVAKSPPSGKRSNKCPYCGKQYIYIISYSKHLKKHEREKEAGKEQTMPLEISFHEDEHSLDLDDYEEERRHLDGELPLRKRGKQKREGQGLAKIGREGMKEEIEDQLENENEERRNGREGVQEDDSEDNLSREGEWEVCCGRREMFACEKCPEKFDRKRSLRKHEISHATLKCNVCEEEFESLEKLRKHRMGHVVEGVLTGQDLEADRDRDRDKDKESESAKDASGYESGVKECVGNEGEAAVTVATGGSLECEGTDRNIESHRRRHSQVDYSCKVGCQRFASKDLFQRHAEQPQERLKAYKCTQCNKTFGTELTLRNHLIATNHKTFVHGEEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDEEDNEDRGNTADGNYARNKNRRDVSSQRKYNYKKELECASCNKRCSSKQSLAKHMEQHVKDEEQRATKSGKQKQIAEKRERQRNGGNADLDSGDKKDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRAEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEDQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFLQNQNQNRGQTLTAQVQPVQNQQRVLQQAAALAQAQVIKAQNIKTITITRQTDAVAAAAQQAVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069818;
90% Identity: iTF_01070517;
80% Identity: -