Basic Information

Insect: Nomada fucata
Gene Symbol: -
Assembly: GCA_948146005.1
Location: OX411282.1:26485329-26490006[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.16 11 6.4 2.3 1 23 428 450 428 450 0.94

2 18 0.0011 0.071 13.3 0.7 2 23 485 506 484 506 0.98

3 18 0.0001 0.0068 16.5 1.0 1 23 617 639 617 639 0.97

4 18 0.027 1.8 8.9 0.2 2 23 643 664 642 664 0.96

5 18 5 3.3e+02 1.7 0.3 1 19 751 769 751 771 0.80

6 18 0.00044 0.029 14.5 0.7 1 21 780 800 780 804 0.92

7 18 0.0016 0.1 12.8 2.3 2 23 882 903 881 903 0.95

8 18 0.00023 0.015 15.4 4.2 1 23 960 982 960 982 0.96

9 18 0.00029 0.019 15.1 0.7 1 20 987 1006 987 1008 0.94

10 18 0.043 2.9 8.2 0.5 2 23 1019 1040 1019 1040 0.97

11 18 3e-05 0.002 18.2 0.6 2 23 1079 1100 1078 1100 0.97

12 18 2.7e-05 0.0018 18.3 1.6 1 23 1105 1127 1105 1127 0.95

13 18 9.8e-05 0.0065 16.5 3.0 1 23 1133 1155 1133 1155 0.98

14 18 4.7e-06 0.00031 20.7 0.4 1 23 1171 1193 1171 1193 0.95

15 18 3.9e-07 2.6e-05 24.1 0.6 1 23 1199 1221 1199 1221 0.99

16 18 4.2e-05 0.0028 17.7 0.2 1 23 1227 1249 1227 1249 0.97

17 18 0.00016 0.01 15.9 4.1 1 23 1255 1277 1255 1277 0.96

18 18 0.011 0.73 10.1 0.4 1 20 1283 1302 1283 1304 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.16	11	6.4	2.3	1	23	428	450	428	450	0.94
2	18	0.0011	0.071	13.3	0.7	2	23	485	506	484	506	0.98
3	18	0.0001	0.0068	16.5	1.0	1	23	617	639	617	639	0.97
4	18	0.027	1.8	8.9	0.2	2	23	643	664	642	664	0.96
5	18	5	3.3e+02	1.7	0.3	1	19	751	769	751	771	0.80
6	18	0.00044	0.029	14.5	0.7	1	21	780	800	780	804	0.92
7	18	0.0016	0.1	12.8	2.3	2	23	882	903	881	903	0.95
8	18	0.00023	0.015	15.4	4.2	1	23	960	982	960	982	0.96
9	18	0.00029	0.019	15.1	0.7	1	20	987	1006	987	1008	0.94
10	18	0.043	2.9	8.2	0.5	2	23	1019	1040	1019	1040	0.97
11	18	3e-05	0.002	18.2	0.6	2	23	1079	1100	1078	1100	0.97
12	18	2.7e-05	0.0018	18.3	1.6	1	23	1105	1127	1105	1127	0.95
13	18	9.8e-05	0.0065	16.5	3.0	1	23	1133	1155	1133	1155	0.98
14	18	4.7e-06	0.00031	20.7	0.4	1	23	1171	1193	1171	1193	0.95
15	18	3.9e-07	2.6e-05	24.1	0.6	1	23	1199	1221	1199	1221	0.99
16	18	4.2e-05	0.0028	17.7	0.2	1	23	1227	1249	1227	1249	0.97
17	18	0.00016	0.01	15.9	4.1	1	23	1255	1277	1255	1277	0.96
18	18	0.011	0.73	10.1	0.4	1	20	1283	1302	1283	1304	0.89

Sequence Information

Coding Sequence: ATGGACACCGTAGAGATAAATACGGCTGTTTCGACACAAAACGAAGGGCAAGGCATCGTGTCGACGGTCGAAATATGCCGTGTTTGCCTCCTTGGGAACTTGGTGATGCGAGATTTGTTTCTCGAAAGCGAGGTTGCTTCACTTTCAGCAAAAGCGATGAGTTTCGCTAATGTAAAGATGTTACCTGGAGACGGCCTACCGACACATGTGTGTTGCATGTGTGCCGACAAACTGGAGTCTGCGTACGACTTTAAGCTGCAGGTTGAACAGGCAGACACAGTTCTTAGGGAGAGGTTTGTTACCATGCATATCAAGGAGGAGTTGTTTTTTGACGATGTTGAGGTACACTTGGAGTCGGGAGAGCAAAACGACAGTATTGGCGAGATGCAGGTAGAGAATCATTATCAAAGTTCTGCAGAAAGCCTCGCATCGATGTCTCAGGAGGAGAAAACGTCGCTTCTGAAGGATCAATTAGATTTGTTGCGAGTAGATAAGTTGGACGAGCAAGAGCAAGCGATGAGAGAACAGAATAACAGCGCCATAATAGAGGAAGTAATCGTCCAAGCGATTCCCATGGAGCAGACATCAGAAAGCTGTCTAAATCAAGACGAGGAAGAAGAAGAAGAAGAAGAACAAGAACAAGAACAAGAACAAGAACAAGATAGTATTGGAGGCATAGCAGTAGATTTAAAAAATGGTGTAATCCTGAAACACGAAAACGAAAATGGCGACTGTCTGGGTAGTATTCAAACTGTGGAGCACGATTATATATTACACCAAGAGTGTATGTTATCCAATGAGCTGCAGCAAGAACAGCAGCAAGAGGAAGAAGGACAGCAGCAGCAGCAAGGACAAGAAGACGAAGGAGAAGAGGAAGAGGAAGGAGAGGAGGAGGAGGAGGAAGTGGGGGAGGAGGAGGAGGAAGAAGAGGAAGAGGAAGAGGAAGATGAAGAGGAAGAACAACAGCAACAACAGTTGACATCTGTAGAATCGTGTGAACGCGAGGATTGCACTGAATACGTAAATTTGTTGGTAAAAGCAGCGGTCGCGACGAACCAAGGAGGCAAAGAGGAGACGGAAAAATTTAATACTACGATGGTCGATGTTAAAGCTGAGTTACAGACACAGTTCCAAACCGAAAGCAGAAGAAGTAAACGTAAGCTAGTTCGGCGTAATCTTGAAACGGACCGAGATTCCGACGAGGAAAATTATTTCGAGAATTTGAATTTAAGTTCGCGTTTGAAGAAAACGCCGGTCTTGAATAAATCGGAGAAAATTTTTTTTTTATGTTACTTGTGTGACAAAGAATTTTTGTCAAAAAACGTTTTAAAGGAACATATGCATTCGCATGAAGAAGTACGAAGAGCGCTTTCGTTGAAGAAAAACGTTGACACACCGCAGAAGAGTGCGAGCACCGTCGCAAAGTCACCCCCATCGGGTAAAAGGTCGAACAAGTGTCCGTACTGCGGCAAGCAATATATATATATAATCTCGTATAGTAAACATTTGAAAAAACATGAGAGGGAGAAGGAGGCGGGAAAGGAGGAGACAATGCCCCTAGAAATCTCGTTTCACGAAGATGAACACAGTTTAGATCTAGATGATTACGAAGAAGAACGCCGCCATTTGGATGGGGAATTTCCTCTCCGGAAGAGAGGAAAACAGAAAAGGGAAAGCGAAGAGATCGTGAAAATAGGTAGAGAGGTGATGAAGGAAGAGGTAGAGGATCATCTGGAGAATGAAAATGAGGAGAGGAGAAACGAGAAAGAGGGAGCACACGTGGAGGATAGTGAGGATAATTTGTCTAGGGAGGAAGAATTGGAGGTTTGCTGCGGCGGCAGAGAAATGTTTTCGTGCGAGAAATGCCCGGAGAAATTTGACAGAAAGCGCGGTTTACGGAAACATGAGATTTCGCATTCCACACTCAAGTGTAACGTATGCGAGGAGGAGTTGGAGTCGCTGGAAAAATTACGAAAGCATCGAATGGGGCACGTTGTCGAAGGCGTGTTGACTGAGCAGGATCTCGAAGCGGATagggataggaatgtggatagagatagagataggtatagggacagggataaggataaggacaaagaaagcgaAGCGGCCAAAGATGAGAGCGGAGTGAAAGAGTGTGTGGGAAACGAGGAAGAAGCAGCAGTAACTGTCGCGACAGGAGGGTCGTTGGAGTGCGAGGGTACAGACAGAAACATGGAGTCGCATCGTCGTCGTCATTCCCAGATCGACTACAGCTGCAAAGTGGGCTGCCAACGGTTCGCTAGCAAGGATCTGTTCCAGAGGCACGCCGAGCAACAGCAGGAACGTTTGAAAGCTTACAAATGCACGCAATGCAACAAAACGTTTGGGAACGAACTTACATTGCGCAATCATTTGATAGCTACCAATCATAAAACGTTCGTCCACGGTGAAGAATACGACCCCAATAAACGTATTAAAAGGGTCGCTGCGAGGGCGGCGCAAAAAATCATCGACAAAATTAAGACGGAGGACGGTTTGGAGGATTACGACGAGGAGGAGGATGACGAGGATCGTGGTAATACCGCGGATGGAAATTACGCTCGGAATAAGAATAGGCGAGACGTTTCCTCGCAGAGAAAGTACAATTACAAGAAGGAACTGGAATGTGCGAGTTGCAACAAGAGGTGCAGCTCGAAGCAATCTCTGGCAAAGCATATGGAGCAGCACGTGAAAGACGAGGAGCAACGGGCGACAAAGTCGGGCAAGCAAAAGCAGATCGCGGAGAAGAGAGAGCGGCAAAGAAACGGTGGTAACGCGGACCTCGACAGTGGAGATAAGAAGGATGACGATTACGATTCCGATTTCGAGAGTGGTTTAGATTGGCCGATGGACAATCACGAGTGCGCAAAGTGTAAGAAGCGATACAGCACGAAAAAGTCATTGCTACGGCATCAATTGTTGCACGAGGAGCCAAACTTTGAATGCGACATTTGTAACGTGAAATTTTACCGCAAGGACAAACTGAAAGCTCATTACGATAAGTGCTCGGAGAAGAATCCTGATCAAGTGAGGAAGTGCAACATTTGTGGCGACAGTTTCGAAAACAACGAGATTCTGCGCGAACATAGATCGAAACATGTTACCGAAGGTATACTCACGGAAGAGGATTTGAGGGATATCGAACCGCGGGCCGAGGAGAAGAAACCGGGGGAGAAGATTGGTAGAAAGAGGAGAACCGATATCGTTGGTTTGGAGTGCACGGAATGTAACAAGCAGTACACGTCGAGGAAAGGCCTGCTTCGACATATACAAGTCCACGAGGGGAAAAAGTATTTGTGCGACATATGCCCGAAGAAATTTTACAGGCGCGAGCATTTGAAGATACACGTAGCCAAACACAACATGATTAAACCGTACAAGTGTACGCGTTGTACCAAACGATTCATTAAAGAGGATCAATTAACGAATCACTTGTCGAAGCACGACCGTACGTTCAAAAAGAACAAAGAGACGGATAGCTCAaaacgattcctttgcgagatttgttcaaagagtttcacgcagtctaccacgttaatcgctcatcttagagcgcacaacggtataaagccgtacgtttgcgaagtatgctcgcgcccatttacaacaaatgcttatttgaaaatgcatatgagaacgcacactcaagagcgaccatacatttgccagtactgttcgcgagcgttcgctcgagccgatacgctcgctaatcatttaacttcgcatacaggagaagcgaaatatcattgcaagtattgcccgaaaaatttccgccgcctcaagtcccttaaggaacacgttttcattcataccggtcagaggccttacgcctgtccaacctgcgatagacggttcaACAATAACGGGAGTCGATACGCTCATAGTAAACGGTGCAAGCAAAATTTCCTTCAAAATCAGAATCAGAATCAGAATCGAGGTCAAGCGTTGTCCACGCAAATACAGCCGGTTCAAAATCAGCAACGAGTGCTGCAACAGGCCGCTGCTCTTGCTCAAGCTCAAGTGATTAAGGCACAAAATATTAAAACCATTACGATTACCAGGCAAGCAGATGCAGTCGCAGCCGCAGCTCAACAAGCGGTTATGCAACATCAGGAGATACTGATGCCACTGATCCTTCCTCTTACGGTTACGCTTGCCGATGTCGGTGAAGAAGTTATACTGCCGGAAGGAACGAAAATATTTACAACCTCGTAA
Protein Sequence: MDTVEINTAVSTQNEGQGIVSTVEICRVCLLGNLVMRDLFLESEVASLSAKAMSFANVKMLPGDGLPTHVCCMCADKLESAYDFKLQVEQADTVLRERFVTMHIKEELFFDDVEVHLESGEQNDSIGEMQVENHYQSSAESLASMSQEEKTSLLKDQLDLLRVDKLDEQEQAMREQNNSAIIEEVIVQAIPMEQTSESCLNQDEEEEEEEEQEQEQEQEQDSIGGIAVDLKNGVILKHENENGDCLGSIQTVEHDYILHQECMLSNELQQEQQQEEEGQQQQQGQEDEGEEEEEGEEEEEEVGEEEEEEEEEEEEDEEEEQQQQQLTSVESCEREDCTEYVNLLVKAAVATNQGGKEETEKFNTTMVDVKAELQTQFQTESRRSKRKLVRRNLETDRDSDEENYFENLNLSSRLKKTPVLNKSEKIFFLCYLCDKEFLSKNVLKEHMHSHEEVRRALSLKKNVDTPQKSASTVAKSPPSGKRSNKCPYCGKQYIYIISYSKHLKKHEREKEAGKEETMPLEISFHEDEHSLDLDDYEEERRHLDGEFPLRKRGKQKRESEEIVKIGREVMKEEVEDHLENENEERRNEKEGAHVEDSEDNLSREEELEVCCGGREMFSCEKCPEKFDRKRGLRKHEISHSTLKCNVCEEELESLEKLRKHRMGHVVEGVLTEQDLEADRDRNVDRDRDRYRDRDKDKDKESEAAKDESGVKECVGNEEEAAVTVATGGSLECEGTDRNMESHRRRHSQIDYSCKVGCQRFASKDLFQRHAEQQQERLKAYKCTQCNKTFGNELTLRNHLIATNHKTFVHGEEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDEEEDDEDRGNTADGNYARNKNRRDVSSQRKYNYKKELECASCNKRCSSKQSLAKHMEQHVKDEEQRATKSGKQKQIAEKRERQRNGGNADLDSGDKKDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRAEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEDQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFLQNQNQNQNRGQALSTQIQPVQNQQRVLQQAAALAQAQVIKAQNIKTITITRQADAVAAAAQQAVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069818;
90% Identity: iTF_01070517;
80% Identity: -