Basic Information

Insect: Nomada hirtipes
Gene Symbol: -
Assembly: GCA_951802735.1
Location: OX637930.1:10462375-10466985[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.17 18 6.4 2.3 1 23 413 435 413 435 0.94

2 17 0.0011 0.12 13.3 0.7 2 23 470 491 469 491 0.98

3 17 8.1e-05 0.0083 16.9 0.9 1 23 602 624 602 624 0.96

4 17 0.00088 0.091 13.7 0.4 2 23 628 649 627 649 0.96

5 17 0.00047 0.048 14.5 0.7 1 21 755 775 755 779 0.92

6 17 0.0017 0.17 12.8 2.3 2 23 857 878 856 878 0.95

7 17 0.00025 0.025 15.4 4.2 1 23 935 957 935 957 0.96

8 17 0.00031 0.032 15.1 0.7 1 20 962 981 962 983 0.94

9 17 0.046 4.8 8.2 0.5 2 23 994 1015 994 1015 0.97

10 17 3.2e-05 0.0033 18.2 0.6 2 23 1054 1075 1053 1075 0.97

11 17 2.9e-05 0.003 18.3 1.6 1 23 1080 1102 1080 1102 0.95

12 17 0.00011 0.011 16.6 3.0 1 23 1108 1130 1108 1130 0.98

13 17 5.1e-06 0.00052 20.7 0.4 1 23 1146 1168 1146 1168 0.95

14 17 4.1e-07 4.3e-05 24.1 0.6 1 23 1174 1196 1174 1196 0.99

15 17 4.5e-05 0.0046 17.7 0.2 1 23 1202 1224 1202 1224 0.97

16 17 0.00017 0.017 15.9 4.1 1 23 1230 1252 1230 1252 0.96

17 17 0.012 1.2 10.1 0.4 1 20 1258 1277 1258 1279 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.17	18	6.4	2.3	1	23	413	435	413	435	0.94
2	17	0.0011	0.12	13.3	0.7	2	23	470	491	469	491	0.98
3	17	8.1e-05	0.0083	16.9	0.9	1	23	602	624	602	624	0.96
4	17	0.00088	0.091	13.7	0.4	2	23	628	649	627	649	0.96
5	17	0.00047	0.048	14.5	0.7	1	21	755	775	755	779	0.92
6	17	0.0017	0.17	12.8	2.3	2	23	857	878	856	878	0.95
7	17	0.00025	0.025	15.4	4.2	1	23	935	957	935	957	0.96
8	17	0.00031	0.032	15.1	0.7	1	20	962	981	962	983	0.94
9	17	0.046	4.8	8.2	0.5	2	23	994	1015	994	1015	0.97
10	17	3.2e-05	0.0033	18.2	0.6	2	23	1054	1075	1053	1075	0.97
11	17	2.9e-05	0.003	18.3	1.6	1	23	1080	1102	1080	1102	0.95
12	17	0.00011	0.011	16.6	3.0	1	23	1108	1130	1108	1130	0.98
13	17	5.1e-06	0.00052	20.7	0.4	1	23	1146	1168	1146	1168	0.95
14	17	4.1e-07	4.3e-05	24.1	0.6	1	23	1174	1196	1174	1196	0.99
15	17	4.5e-05	0.0046	17.7	0.2	1	23	1202	1224	1202	1224	0.97
16	17	0.00017	0.017	15.9	4.1	1	23	1230	1252	1230	1252	0.96
17	17	0.012	1.2	10.1	0.4	1	20	1258	1277	1258	1279	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGAGATAAATACGACTGTTTCGACACAAAACGAAGGGCAGGGCATCGTGTCGACGGTCGAGATATGCCGTGTTTGTCTCCTTGGGAACTTGGTGATGCGGGATTTGTTTCTCGAAAGCGAGGTCGCTTCACTTTCAGCAAAAGCGATGAGTTTCGCTAATGTAAAGATGTTACCTGGAGACGGCTTACCGACACATGTGTGTTGCGTATGCGCCGACAAACTGGAGTCTGCGTACGACTTTAAGTTACAGGTTGAACAGGCAGACACAGTTCTTAGGGAGAGATTCGTTACCATGCATATCAAAGAGGAGTTGTTTTTCGACGATGTTGAGGCACACTTGGAGTCCGGGGGGCAAAACGACAGTATCGGCGAGATGCAGGTGGAGGATCATTATCAAAGTTCTGCAGAAAGCCTCGCATCCATGTCTCAGGAGGAGAAAACGTCGCTTCTGAAGGATCAATTAGATTTGTTGCGAGTGGATAAGTTGGACGAGCAAGAGCAAGCGATGAGAGAACAGAATAACAGCGCCATAATAGAGGAAGTAATCGTCCAAGCGATTCCCATGGAACAGCCATCGGAAGGCTGTCTAAATCAaggcgaggaagaagaagaacaagaacaagaacaagaagaagatttaaaaaatgatgtaATGCTGAAACACGAGAACAGCGATTGTCTGGGAACTATTGAAACTGTGGAACACGATTATATATTACACCAAGAGTGCGTGTTATCCAACGAACAGCAGCAAGAACATCAACAAGAGGAAGAAgggcagcagcagcagcagcagcaaggACAAGAACACGAAGGagtagaggaagaagaggaggaggaggtggaggaggaggaggaggaaggggaggaggaggaggaggaagaagaagtagaagaggaggaacaacagcaacaacagttGACCTCTGTAGAATCGTGTGAACGCGACGATTGCAATGAATACGTAAATTTGTTGGTAAAAGCAGCCGTCGCGACGGACCAAGGAGGTGAAGAGGAGACGGAAAAATTGAATGCTACGATGGTCGATGTTAAAGCTGAGTTACAGACACAGTGCCAAACCGAGAGCAGACGTAGTAAACGTAAGCTAGTTCGGCGTAATCTTGAAACGGACCGAGATTCCGACgaggaaaattatttcgagAATTTGAATTTAAGTTCGCGACTGAAGAAAACGCCGGTCTCTAATAAATCGgagaaaattttttttttatgttactTGTGCGACaaagaatttttatcgaaaaacGTTTTAAAGGAACATATGCATTCGCACGAAGAAGTGCGAAGAGCTCTTTCATTGAAGAAAAACGTTGACACACCGCAAAAGAGTGCGAACACCGTCGCAAAGTCACCCCCATCGGGTAAAAGATCGAACAAGTGTCCGTACTGCGGCaagcaatatatatatataatctcGTATAGTAAGCATTTGAAAAAACacgagagggagaaagaggcgGGAAAGGAGGAGACAATGCCCCTCGAAATCTCGTTTCACGAAGATGAACACAGTTTAGATCTAGACGATTACGAGGAGGAACGCCGCCATTTGGATGGGGAATTTCCTCTCCGGAAGAGAGGCAAACAGAAAAGGGAAGGCCAAGGGATCGCGAAGATAGGTAGAGAGGTGATGAAGGAAGAGATAGAAGATCAGCTGGAGAATGAAAATGAGGAGAGGAGAAACGGGAGAGAGGGAGTACAGGAGGACGATAGCGAGGATAATTTGTCTAGGGAAGGAGAATTGGAGGTTTGCTGCGGCCGCAGAGAAATGTTTGCTTGCGAGAAATGCCCGGAGAAATTTGACAGGAAGCGCAGTTTACGGAAACATGAGATTTCGCATGCCACGCTCAAGTGTAACGTATGCGAGGAGGAGTTTGAGTCGCTGGAAAAATTACGGAAGCATCGAATGGGGCACGTTGTCGAAGGCGTGTTAACTGGGCAGGATCTCGAAGCGGATAGGGACAGGGATAAGGATAAAGAAAGCGAATCGGCCAAGGATGCGAGCGGTTATGAGGGCGGAGTGAAAGAGTGTGTGGGAAACGAGGGAGAAGCAGCAGTAACGGTCGCAACAGGAGGGTCGTTGGAGTGCGAGGGTACAGACAGAAACATCGAGTcccatcgtcgtcgtcattCCCAGGTCGACTACAGCTGCAAAGTGGGCTGCCAACGGTTCGCTGGCAAGGATCTGTTCCAGAGGCACGCCGAGCAACCGCAGGAACGTTTGAAAGCTTACAAGTGCACGCAGTGCAACAAAACGTTTGGGAACGAACTTACGTTGCGCAATCATTTGATAGCTACCAATCATAAAACGTTCGTCCACGGTGAAGAATACGACCCGAATAAACGGATTAAAAGGGTCGCTGCGAGGGCGGCGCAAAAAATCATCGACAAAATTAAAACCGAGGACGGTTTGGAGGATTACGACGACGAGGAGGATAACGAGGATCGTGGTAATGCCGCGGATGGAAATTACGCTCGGAATAAGAATAGGCGAGACGTTTCCTCGCAGAGAAAGTACAATTACAAGAAGGAACTGGAATGCGCGAGTTGCAACAAGAGGTGCAGCTCGAAGCAATCTTTGGCAAAGCATATGGAGCAGCACGTGAAGGACGAGGAGCAACGGGCGACAAAGTCGGGCAAGCAAAAGCAGATTGCGGAGAAGAGAGAGCGGCAAAGAAACGGTGGTAACGCCGACCTCGACAGTGGGGACAAGAAGGATGACGATTACGATTCCGATTTCGAGAGTGGTTTAGATTGGCCGATGGACAATCACGAGTGCGCAAAGTGTAAGAAGCGATACAGCACGAAAAAGTCGTTGCTGCGGCATCAATTGTTGCACGAGGAGCCGAACTTTGAATGCGACATTTGTAACGTGAAATTTTACCGCAAGGACAAACTGAAAGCTCATTACGATAAATGCTCGGAGAAGAATCCCGATCAAGTGAGGAAGTGCAACATTTGTGGCGACAGTTTCGAAAACAACGAGATTCTGCGCGAGCATAGATCGAAACATGTTACCGAAGGTATACTGACGGAGGAGGATTTGAGAGATATCGAGCCGCGGGCCGAGGAGAAGAAGCCGGGGGAGAAGATTGGTAGAAAGAGGAGAACCGATATCGTTGGTTTGGAGTGCACGGAATGCAACAAGCAGTACACGTCGAGGAAAGGCCTCCTTAGACATATACAAGTCCACGAGGGGAAAAAGTATTTGTGCGACATATGCCCGAAGAAATTTTATAGGCGCGAGCATTTAAAGATACACGTAGCCAAACACAACATGATTAAACCGTACAAGTGTACGCGTTGTACCAAACGTTTCATCAAAGAGGATCAGCTAACGAATCACTTGTCGAAGCACGACCGTACGTTCAAGAAGAACAAAGAGACGGATAGCTCGAAAAGATTCCTTTGCGAGATTTGTTCAAAGAGTTTCACGCAGTCTACCACGTTAATCGCTCATCTTAGAGCGCACAACGGTATAAAGCCGTACGTTTGCGAAGTATGCTCGCGCCCATTTACAACGAATGCTTATTTGAAAATGCATATGAGGACGCACACTCAAGAGCGACCATATATTTGTCAGTACTGTTCGCGAGCGTTCGCTCGAGCCGACACACTCGCTAATCATTTAACTTCGCATACAGGAGAAGCGAAATACCATTGCAAGTATTGCCCGAAAAATTTCCGCCGCCTCAAGTCCCTTAAGGAACACGTTTTCATTCATACCGGCCAAAGGCCTTACGCCTGCCCAACCTGCGATAGACGGTTCAACAATAACGGGAGTCGATACGCTCACAGTAAACGGTGCAAGCAAAACTTCCTTCAGAATCAGAATCAGAATCGAGGTCAAGCGTTAACCGCGCAAGTACAGCCGGTTCAAAATCAGCAACGAGTGCTGCAACAGGCCGCTGCTCTAGCTCAGGCTCAAGTGATTAAGgcacaaaatattaaaaccaTTACGATTACCAGGCAAACAGACGCAGTCGCAGCCGCAGCTCAACAAGCGGTTATGCAACATCAGGAGATACTGATGCCACTGATCCTTCCACTTACGGTTACTCTTGCAGATGTCGGTGAAGAAGTTATACTGCCGGAaggaacgaaaatatttacaaccTCGTAA
Protein Sequence: MDAVEINTTVSTQNEGQGIVSTVEICRVCLLGNLVMRDLFLESEVASLSAKAMSFANVKMLPGDGLPTHVCCVCADKLESAYDFKLQVEQADTVLRERFVTMHIKEELFFDDVEAHLESGGQNDSIGEMQVEDHYQSSAESLASMSQEEKTSLLKDQLDLLRVDKLDEQEQAMREQNNSAIIEEVIVQAIPMEQPSEGCLNQGEEEEEQEQEQEEDLKNDVMLKHENSDCLGTIETVEHDYILHQECVLSNEQQQEHQQEEEGQQQQQQQGQEHEGVEEEEEEEVEEEEEEGEEEEEEEEVEEEEQQQQQLTSVESCERDDCNEYVNLLVKAAVATDQGGEEETEKLNATMVDVKAELQTQCQTESRRSKRKLVRRNLETDRDSDEENYFENLNLSSRLKKTPVSNKSEKIFFLCYLCDKEFLSKNVLKEHMHSHEEVRRALSLKKNVDTPQKSANTVAKSPPSGKRSNKCPYCGKQYIYIISYSKHLKKHEREKEAGKEETMPLEISFHEDEHSLDLDDYEEERRHLDGEFPLRKRGKQKREGQGIAKIGREVMKEEIEDQLENENEERRNGREGVQEDDSEDNLSREGELEVCCGRREMFACEKCPEKFDRKRSLRKHEISHATLKCNVCEEEFESLEKLRKHRMGHVVEGVLTGQDLEADRDRDKDKESESAKDASGYEGGVKECVGNEGEAAVTVATGGSLECEGTDRNIESHRRRHSQVDYSCKVGCQRFAGKDLFQRHAEQPQERLKAYKCTQCNKTFGNELTLRNHLIATNHKTFVHGEEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDEEDNEDRGNAADGNYARNKNRRDVSSQRKYNYKKELECASCNKRCSSKQSLAKHMEQHVKDEEQRATKSGKQKQIAEKRERQRNGGNADLDSGDKKDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRAEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEDQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFLQNQNQNRGQALTAQVQPVQNQQRVLQQAAALAQAQVIKAQNIKTITITRQTDAVAAAAQQAVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069818;
90% Identity: iTF_01070517;
80% Identity: -