Basic Information

Insect: Nomada fabriciana
Gene Symbol: -
Assembly: GCA_907165295.1
Location: OU015692.1:19925818-19930535[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.16 15 6.4 2.3 1 23 413 435 413 435 0.94

2 18 0.001 0.1 13.3 0.7 2 23 470 491 469 491 0.98

3 18 7.4e-05 0.0071 16.9 0.9 1 23 602 624 602 624 0.96

4 18 0.0008 0.077 13.6 0.4 2 23 628 649 627 649 0.96

5 18 4.9 4.7e+02 1.7 0.3 1 19 768 786 768 788 0.80

6 18 0.00043 0.041 14.5 0.7 1 21 797 817 797 821 0.92

7 18 0.0015 0.15 12.7 2.3 2 23 899 920 898 920 0.95

8 18 0.00022 0.021 15.4 4.2 1 23 977 999 977 999 0.96

9 18 0.00028 0.027 15.0 0.7 1 20 1004 1023 1004 1025 0.94

10 18 0.042 4.1 8.2 0.5 2 23 1036 1057 1036 1057 0.97

11 18 2.9e-05 0.0028 18.2 0.6 2 23 1096 1117 1095 1117 0.97

12 18 2.6e-05 0.0025 18.3 1.6 1 23 1122 1144 1122 1144 0.95

13 18 9.6e-05 0.0092 16.5 3.0 1 23 1150 1172 1150 1172 0.98

14 18 4.6e-06 0.00045 20.7 0.4 1 23 1188 1210 1188 1210 0.95

15 18 3.8e-07 3.6e-05 24.1 0.6 1 23 1216 1238 1216 1238 0.99

16 18 4.1e-05 0.0039 17.7 0.2 1 23 1244 1266 1244 1266 0.97

17 18 0.00015 0.015 15.9 4.1 1 23 1272 1294 1272 1294 0.96

18 18 0.011 1 10.1 0.4 1 20 1300 1319 1300 1321 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.16	15	6.4	2.3	1	23	413	435	413	435	0.94
2	18	0.001	0.1	13.3	0.7	2	23	470	491	469	491	0.98
3	18	7.4e-05	0.0071	16.9	0.9	1	23	602	624	602	624	0.96
4	18	0.0008	0.077	13.6	0.4	2	23	628	649	627	649	0.96
5	18	4.9	4.7e+02	1.7	0.3	1	19	768	786	768	788	0.80
6	18	0.00043	0.041	14.5	0.7	1	21	797	817	797	821	0.92
7	18	0.0015	0.15	12.7	2.3	2	23	899	920	898	920	0.95
8	18	0.00022	0.021	15.4	4.2	1	23	977	999	977	999	0.96
9	18	0.00028	0.027	15.0	0.7	1	20	1004	1023	1004	1025	0.94
10	18	0.042	4.1	8.2	0.5	2	23	1036	1057	1036	1057	0.97
11	18	2.9e-05	0.0028	18.2	0.6	2	23	1096	1117	1095	1117	0.97
12	18	2.6e-05	0.0025	18.3	1.6	1	23	1122	1144	1122	1144	0.95
13	18	9.6e-05	0.0092	16.5	3.0	1	23	1150	1172	1150	1172	0.98
14	18	4.6e-06	0.00045	20.7	0.4	1	23	1188	1210	1188	1210	0.95
15	18	3.8e-07	3.6e-05	24.1	0.6	1	23	1216	1238	1216	1238	0.99
16	18	4.1e-05	0.0039	17.7	0.2	1	23	1244	1266	1244	1266	0.97
17	18	0.00015	0.015	15.9	4.1	1	23	1272	1294	1272	1294	0.96
18	18	0.011	1	10.1	0.4	1	20	1300	1319	1300	1321	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGAGATAAATACGACTGTTTCGACAGAAAACGAAGGGCAGGGCATCGTGTCGACGGTCGAAATATGCCGTGTTTGTCTGCTCGGGAACTTGGTGATGCGGGATTTGTTTCTCGAAAGCGAGGTCGCTTCACTTTCAGCAAAAGCGATGAGTTTCGCTAATGTAAAGATGTTACCTGGAGATGGCTTACCGACGCATGTGTGTTGTGTATGCGCCGAGAAACTGGAGTCTGCGTACGACTTCAAGTTACAGGTTGAACAGGCAGACACAGTTCTTAGAGAGAGGTTTGTTACCATGCATATCAAAGAGGAGTTGTTTTTCGAGGATGTTGAGGTACACTTGGAGTCAGGAGAGCAAAACGACAGTATCGGCGAGATGCAGGTGGAGAATCATTATCAACGTTCTGCAGAAAGCCTTGCGTCAATGTCTCAGGAGGAGAAAACGTTACTTCTGAAGGATCAATTAGATTTGTTGCAAGTGGATAAGTTGGACGAGCAAGAGCAAGCGATGAGAGAACAGAATAACAGCGCCGTAATAGAGGAAATAATCGTCCAAGCGATTCCCATGGAACAGACATCGGAAGGCTGTCTAAATCAAGACGAGGAAGAAGAAGAACAAGAACGAGATAGCATTCGTGGCATAGCAGTAGATTTAAAAAATGATGTAATGCTGAAACACGAGAACGGCGATTGTCTGGGAAGTATTCAAACTGTGGAACACGATTATATATTACACCAAGAGTGCATGTTATCCAACGAACAGCAGCAAGAACAGCAACAAGAGGAAGAAGGGCAGCAGCAGCAGCAAGAACAAGAACAAGAACACGAAGGAGAAGAGGAAGAAGAGGAGGAGGAGGAGGAAGAGGAGGGGGAGGGGGAGGAGGACGAAGAAGGGGAAGAGGAGGAAGAACGGCAACAACAGTTGACCTCTGCAGAATCGTGTGAACGCGACGATTGCACTGAATACGTAAATTTGTTGGTAAAAGCAGCCGTCGCGACGAACCAAGGAAGTGAAGAAGAGACGGAAAAATTTAATGCTACGATGGTCGATGTTAAAGCTGAGTTACAGACCCAGTGCCAAACCGAGAGCAGAAGAAGTAAACGTAAGCTAGTTCGGCGTAATATTGAAACTGACCGACATTCCGACGAGGAAAATTATTTCGAGAATTTGAATTTAAGTTCTCGACTGAAGAGAACGTCGATCTCTAATAAAGCGGAGAAAATTTTTTTTTTATGCTACTTGTGTGACAAAGAATTTTTATCAAAAAACGTTTTAAAGGAACATATGCATTCGCACGAAGAAGTACGAAGAGCGCTTTCATTGAAGAAAAACGTTGACACACCGCAAAAGAGTGCGAGCTCCTTGGCAAAGTCACCCCCATCGGGTAAAAGGTCGAACAAGTGTCCGTACTGTGGCAAGCAATATATATATATAATATCGTATAGTAAGCATTTGAAAAAACACGAGAGGGAGAAGGAGGCGGGAAAGGAGGAGACAATGCCCCTCGAAATCTCGTTTCACGAAGATGAACACAGTTTAGATCTAGACGATTACGAGGAGGCACGCCGCCAGTTTGATGGGGAATTTTCTCTCCGCAAGAGAGGAAAACAGAAAAGGGAAGGCGAAGGGATCGCGAAGATAGTTAGAGAGGGGATGAAGGAAGAGATAGAGGATCAGCTGGAGAATGAAAATGAGGAGAGGAAAAACGGGAGGGAGGGAGTACACGAGGACGATAGCGAGGATAATTTGTCTAGGGAGGGGGAATTGGAGGTTTGCTGCGACCGCAGAGAAATGTTTGCGTGCGAGAAATGCCCGGAGAAATTTGACAGGAAGCGCAGTTTACGGAAACATGAGATTTCACATGCCACGCTCAAGTGTAACGTATGCGAGGAGGAGTTTGAGTCGCTGGAAAAATTACGAAAGCATCGAATGGGGCACGTTGTCGAAGGCGTGTTAACTGAGCAGGATCTCGAAGCGGATAGGGATAGGCATAGAGATAGAGATAGGGACAGGGACAGGGACAGGGACAGGGACAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGGGACAGGGACAACGATAAAGAAAGCGAATCGGCTAAAGATGCGAGCGGTTATGATAGCGCAGTGAAAGAGTGTGTGGAAAACGAGGAAGAAGCAGCAGTAACGGTCGCAACAGGAGGGTTGTTGGAGTGCGAGGGTACAGACAGAAACATGGAGTCGCATCGTCGTCGTCATTCAAAGGTCGACTACAGCTGCAAAGTGGGCTGCCAACGGTTCGCAAGCAAGGATCTGTTCCAGAGGCACGCCGAGCATCAGCAGGAACGTTTGAAAGCTTACAAGTGCACGCAGTGCAACAAAACGTTTGGGAACGAACTTACGTTGCGCAATCATTTAATAGCTACCAATCATAAAACGTTCGTCCAGGGTGAAGAATACGACCCCAATAAACGGATTAAAAGGGTTGCTGCGAGGGCAGCGCAAAAAATCATCGACAAAATTAAAACGGAGGACGGTTTGGAGGATTACGACGAGGAGGAGGATAACGAGGATCGTGGTAATACCGCGGATGGAAATTACGCTCGGAATAAGAATAGGCGAGACGTTTCCTCGCAGAGAAAGTACAATTACAAGAAGGAACTGGAATGCGCGAGTTGCAACAAGAGGTGCAGCTCGAAGCAATCTTTGGCAAAGCATATGGAGCAGCACGTGAAGGACGAGGAGCAACGGGTGACAAAGTCGGGCAAGCAAAAGCAGATTGCGGAGAAGAGAGAGCGGCAAAGAAACGGTGGTAACGCGGACCTCGACAGTGGGGATAAGAAGGATGACGATTACGATTCCGATTTCGAGAGTGGTTTAGATTGGCCGATGGACAATCACGAGTGCGCAAAGTGTAAGAAGCGATACAGTACGAAAAAGTCTTTGCTGCGGCATCAATTGTTGCACGAGGAGCCAAACTTTGAATGCGACATTTGTAACGTGAAATTTTACCGCAAGGACAAACTGAAAGCTCATTACGATAAATGCTCGGAGAAGAATCCTGATCAAGTGAGGAAGTGTAACATATGTGGCGACAGTTTCGAAAACAACGAAATTCTGCGCGAACATAGATCGAAACATGTTACCGAGGGTATACTGACGGAGGAGGATTTGAGGGATATCGAGCCGCGGGCCGAGGAGAAGAAGCCGGGGGAGAAGATTGGTAGAAAGAGGAGGACCGATATCGTTGGTTTGGAGTGCACGGAGTGCAACAAGCAGTACACGTCGAGGAAGGGCCTCCTTAGACATATACAAGTCCACGAGGGGAAAAAGTATTTGTGCGACATATGCCCGAAGAAATTTTACAGGCGCGAGCATTTGAAGATACACGTAGCGAAACACAACATGATTAAACCGTACAAGTGTACGCGTTGTACCAAACGTTTCATCAAAGAGGATCAGCTAACGAATCACTTGTCGAAGCACGACCGTACATTCAAGAAGAATAAAGAGACGGATAGCTCGAAAAGATTTCTTTGTGAGATTTGTTCAAAGAGTTTCACGCAGTCTACCACGTTAATCGCTCATCTTAGAGCCCACAACGGTATAAAGCCGTACGTTTGCGAAGTATGCTCGCGCCCATTTACAACGAATGCTTATTTGAAAATGCATATGAGAACGCACACTCAAGAGCGACCATATATTTGTCAGTACTGTTCGCGAGCGTTCGCTCGCGCCGACACACTCGCTAATCATTTAACTTCGCATACAGGAGAAGCGAAATACCATTGCAAGTATTGCCCGAAAAATTTCCGCCGCCTCAAGTCTCTTAAGGAACACGTTTTCATTCATACCGGCCAAAGGCCTTACGCCTGTCCAACCTGCGATAGACGATTCAACAATAACGGGAGTCGATACGCTCACAGCAAACGGTGCAAGCAAAACTTCCTTCAGAATCAGAATCAGAATCGAGGTCAAGCGTTAACCGCGCAAGTACAGCCGGTTCAAAATCAGCAACGAGTGCTGCAACAGGCCGCTGCTCTTGCTCAAGCTCAAGTGATTAAGGCACAAAATATTAAAACCATTACCATTACCAGGCAAACAGACGCAGTCGCAGCCGCAGCTCAACAAGCGGTTATGCAACATCAGGAGATACTGATGCCACTCATCCTTCCACTCACGGTTACTCTTGCCGATGTCGGTGAAGAAGTTATACTGCCGGAAGGAACGAAAATATTTACAACTTCGTAA
Protein Sequence: MDAVEINTTVSTENEGQGIVSTVEICRVCLLGNLVMRDLFLESEVASLSAKAMSFANVKMLPGDGLPTHVCCVCAEKLESAYDFKLQVEQADTVLRERFVTMHIKEELFFEDVEVHLESGEQNDSIGEMQVENHYQRSAESLASMSQEEKTLLLKDQLDLLQVDKLDEQEQAMREQNNSAVIEEIIVQAIPMEQTSEGCLNQDEEEEEQERDSIRGIAVDLKNDVMLKHENGDCLGSIQTVEHDYILHQECMLSNEQQQEQQQEEEGQQQQQEQEQEHEGEEEEEEEEEEEEGEGEEDEEGEEEEERQQQLTSAESCERDDCTEYVNLLVKAAVATNQGSEEETEKFNATMVDVKAELQTQCQTESRRSKRKLVRRNIETDRHSDEENYFENLNLSSRLKRTSISNKAEKIFFLCYLCDKEFLSKNVLKEHMHSHEEVRRALSLKKNVDTPQKSASSLAKSPPSGKRSNKCPYCGKQYIYIISYSKHLKKHEREKEAGKEETMPLEISFHEDEHSLDLDDYEEARRQFDGEFSLRKRGKQKREGEGIAKIVREGMKEEIEDQLENENEERKNGREGVHEDDSEDNLSREGELEVCCDRREMFACEKCPEKFDRKRSLRKHEISHATLKCNVCEEEFESLEKLRKHRMGHVVEGVLTEQDLEADRDRHRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDNDKESESAKDASGYDSAVKECVENEEEAAVTVATGGLLECEGTDRNMESHRRRHSKVDYSCKVGCQRFASKDLFQRHAEHQQERLKAYKCTQCNKTFGNELTLRNHLIATNHKTFVQGEEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDEEEDNEDRGNTADGNYARNKNRRDVSSQRKYNYKKELECASCNKRCSSKQSLAKHMEQHVKDEEQRVTKSGKQKQIAEKRERQRNGGNADLDSGDKKDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRSKHVTEGILTEEDLRDIEPRAEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEDQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFLQNQNQNRGQALTAQVQPVQNQQRVLQQAAALAQAQVIKAQNIKTITITRQTDAVAAAAQQAVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01069818;
90% Identity: iTF_01070517;
80% Identity: -