Basic Information

Gene Symbol
kn
Assembly
GCA_949358125.1
Location
OX442328.1:19422996-19435024[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-118 3.3e-114 383.1 0.0 210 387 33 227 27 230 0.98
2 2 6.7e-06 0.05 12.6 8.3 421 567 237 396 228 405 0.66

Sequence Information

Coding Sequence
ATGCATTTCCTTGCATCTATTGGAAGAATTCTGTCCATTTCAAATCCCGAGATATTGGCTCCACCTCCCAAGGGACTCTCCCTTTCACTGCCCTTTGTAGTAATATCAACTCAAGTGATGGTGGACGGGCCTTTGTTAGCGATATCGGACAACATGTTCGTCCACAACAACAGCAAACACGGGCGGAGGGCGAAGAGGCTCGATCCAACTGAAGGTACCGACGCGTCTGACAACCATTCGGGTCTTTACCCCCCTCTGCCAGTAGCAACTCCTTGCATAAAAGCGATATCTCCAAGCGAAGGATGGACCTCAGGGGGCTCCACCGTCATCATTGTGGGTGACAACTTCTTTGATGGACTTCAAGTTGTGTTCGGGACCATGCTTGTTTGGAGTGAGTTAATAACATCGCACGCGATCAGAGTTCAGACTCCGCCGCGGCATATACCGGGTGTTGTGGAAGTGACGCTCTCGTACAAGAGTAAACAGTTCTGCAAAGGAGCGCCTGGAAGATTTGTATACGTTTCAGCACTCAACGAGCCCACGATAGATTACGGGTTTCAGAGGCTCCAGAAACTTATACCGAGGCATCCTGGCGACCCGGAGAAATTACCCAAGGAAATCATCCTAAAACGAGCAGCGGACCTTGCCGAAGCTCTTTACTCCATGCCTCGCAACAACCAGCTGGGGCTGGGAGGACCTCGGTCTCCGCCCTCGAGCATGCCCTTCAACACGTACACTGGACAGTTGGCAGTTAGTGTGCAAGATACAGCGGCTTCTCAGTGGACTGAAGAAGAGTACGCGCGTGGCGGAGGCGGGGGCGGGACGGGGTCGGTCTCGCCGCGATACTGCTCGGCGGCGAGCACTCCGCACGCGCCCGCCGCGTACCCGCATCCGCAGCACTACCCCGCACCACCTACCTCGCTCTTCAATACCACTTCCCTGTCGCTAGGCCCATACCACCCTGCAAACGTGAATGGCCACGTATCTGACCATCACTATAACGCGTATAACTCGAAAGATACCGCATATTACACTGAAAGAAATGCAGATTCTAAGAGCAGTGACTGTCCAGTAAACACTCATACAAAATTCACAAGCGCTGATATGAAAGGGGATGGAAATAAAGCGGCTAAAAGAAGCGCTTTCGCTGTCGTGCGACAGAGTCCGCCACGGGTGTCCAATTCGCAACAACACAATTGGCAGCTAGCTGTTCAGTGTTAG
Protein Sequence
MHFLASIGRILSISNPEILAPPPKGLSLSLPFVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDASDNHSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPSSMPFNTYTGQLAVSVQDTAASQWTEEEYARGGGGGGTGSVSPRYCSAASTPHAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANVNGHVSDHHYNAYNSKDTAYYTERNADSKSSDCPVNTHTKFTSADMKGDGNKAAKRSAFAVVRQSPPRVSNSQQHNWQLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00895708;
80% Identity
-