Basic Information

Gene Symbol
kn
Assembly
GCA_949320045.1
Location
OX439449.1:4284538-4295719[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.4e-141 1.7e-137 459.6 0.0 183 387 23 245 20 250 0.99
2 3 2.2e-08 8.6e-05 21.4 0.8 421 468 255 304 246 312 0.84
3 3 0.043 1.6e+02 0.6 0.3 450 522 336 409 321 415 0.82

Sequence Information

Coding Sequence
ATGGAACAACGCAATAAGAGAGGAAATTCGTTGACCAAGAATGGATATCGTAAAGCCAAACTACTATTTTTTCTCAAATTCTTCCTCAAGTGCAATCAAAACTGTCTGAAAAATGCGGGAAATCCTAGGGACATGAGAAGATTTCAAGTGGTAATATCAACTCAAGTGATGGTAGACGGCCCTCTGCTGGCGATATCGGACAACATGTTTGTCCACAACAACAGCAAGCACGGCCGGAGAGCGAAGCGGCTCGACCCCACTGAAGGTATTGACGCCGCGCCTGACAACACTTCGGGTCTCTACCCACCTCTACCAGTAGCAACTCCATGTATAAAGGCgatatccccgagcgaaggcTGGACGTCTGGAGGCTCAACAGTTATCATAGTAGGGGACAATTTCTTTGACGGATTACAAGTTGTGTTTGGGACCATGCTTGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTGCAGACGCCTCCGCGGCACATACCAGGCGTGGTGGAAGTCACACTCTCCTATAAGAGCAAGCAGTTCTGCAAGGGGGCGCCCGGCAGATTTGTCTATGTTTCAGCGCTCAACGAGCCTACGATAGATTACGGATTTCAACGGCTGCAGAAACTTATACCGAGGCACCCTGGCGACCCGGAAAAACTACCAAAGGAAATCATACTCAAACGAGCGGCGGACCTGGCAGAAGCATTGTACTCAATGCCTAGGAATAACCAACTAGGGCTCGGAGCCCCGCGGTCGCCGCCTTCCAGTATGCCTTTCAACTCGTACACCGGCCAGCTGGCTGTCAGTGTTCAAGACACGGCCGCTTCACAATGGACGGAAGAGGAGTATGCGCGTAGCGGCGGGTCGGTCTCCCCGCGATACTGTTCCGCCGCGTCCACTCCGCACGCCGCGCCCGCGTCCTACCCGCACCCGCAACACTACCCAGCGCCGCCCACTTCACTCTTCAACACTACCTCACTGTCACTAGGGCCGTATCACCCCGCCAACATGAATGGACTATCTGACCATCACTATAACACGTATAATACGAAAGATAGCGCTTATTACACTGAAAGAAATGATTCTAAGGGCGGTGCTGACTGTCCGGCAAACACTCATTCAAAATGCGCGGCTGGGATGAAAGGGGATGAGAATAAAGGCGGCAAGAAAAGCGCTTTTGCGGTAGTCAGACAGAGTCCACCCAGGGTGTCCAATGCTCAACTTTACCAGCACAATTGGCAGCTCGCAGTCCAATGTTAG
Protein Sequence
MEQRNKRGNSLTKNGYRKAKLLFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPSSMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGLSDHHYNTYNTKDSAYYTERNDSKGGADCPANTHSKCAAGMKGDENKGGKKSAFAVVRQSPPRVSNAQLYQHNWQLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00895708;
80% Identity
-