Lstr020901.2
Basic Information
- Insect
- Lathronympha strigana
- Gene Symbol
- kn
- Assembly
- GCA_949128165.1
- Location
- OX421911.1:12423713-12431946[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-114 2.1e-110 371.1 0.0 218 387 2 189 1 193 0.99 2 2 5.7e-09 6.5e-05 22.7 8.7 420 555 198 346 190 364 0.59
Sequence Information
- Coding Sequence
- ATGGTCGACGGTCCCCTCCTAGCCATATCGGACAACATGTTCGTACACAACAACAGCAAGCACGGCCGGCGCGCCAAGCGGCTCGACCCGACTGAAGGTATTGACGCCGCCTCCGACACCACTTCGGGCCTATACCCCCCACTGCCAGTGGCAACCCCGTGCATCAAAGCTATCTCTCCCAGTGAGGGATGGACGTCAGGCGGATCAACGGTCATCATCGTAGGGGACAACTTCTTCGACGGACTGCAGGTCGTTTTTGGAACCATGCTGGTTTGGAGTGAGCTAATAACATCGCACGCGATCCGGGTGCAGACGCCGCCCAGACACATACCTGGCGTGGTGGAAGTGACCTTATCGTATAAAAGCAAGCAGTTCTGCAAAGGTGCGCCGGGCAGATTCGTCTATGTTTCAGCGCTGAACGAGCCGACGATAGATTACGGGTTTCAGAGGCTACAGAAGCTCATACCGAGGCATCCTGGCGACCCGGAGAAGTTACCGAAGGAAATAATCCTAAAAAGAGCAGCGGACCTAGCAGAAGCGTTATACTCCATGCCGCGGAACAACCAGCTCGGCCTGGGCGCGCCTCGGTCCCCGTCAGCGGGCATGCCTTTCAACTCCTACACTGGCCAGTTAGCGGTCAGTGTCCAGGATACAGCGGCGTCGCAGTGGACTGAAGAGGAGTACGCGAGGAGCGGCGGGTCAGTGTCGCCAAGGTACTGCTCGGCCGCGTCTACCCCGCACGCCGCGTCCTACCCGCATCCTCAACACTACCCTGCGCCGCCGACGTCGCTTTTCAACACTACCTCGATGTCCCTGGGCCCGTATCATCCGGCGAACCTGAATGGACATTTATCATCTGACCATCACCACTATAACGCGTATAACACGAAAGATAGCGGGCATTACAGTGAAAGAAACGAGAATTCAAAAAGCTCGGCTGACTGTCCGGCAAACACTCATTCAAAATGCACCGCGAGCGATATGAAAGGGCAGGAGACTAAAGAGACTAAGCTAAGGAGTGCCTTTGCGGTCGTCAGGCAGAGTCCGCCGCGCGCCAATTTTCAACATCATCAGAACTGGCAACATCTCGCCGTTCAGtgttag
- Protein Sequence
- MVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAASDTTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPSAGMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAASYPHPQHYPAPPTSLFNTTSMSLGPYHPANLNGHLSSDHHHYNAYNTKDSGHYSERNENSKSSADCPANTHSKCTASDMKGQETKETKLRSAFAVVRQSPPRANFQHHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00656930; iTF_00114727; iTF_01072235; iTF_01463948; iTF_00808888; iTF_00667141; iTF_01564345; iTF_00651516;
- 90% Identity
- iTF_00656930; iTF_01072235; iTF_00680307; iTF_01564345; iTF_01463948; iTF_01334542; iTF_00412310; iTF_01245722; iTF_00022589;
- 80% Identity
- -