Nudd032641.1
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- kn
- Assembly
- GCA_905163555.1
- Location
- LR991065.1:9002008-9007307[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-96 2.8e-92 311.6 0.0 248 387 15 155 7 160 0.97 2 2 2.4e-09 4.6e-05 23.6 8.7 420 567 164 322 156 333 0.59
Sequence Information
- Coding Sequence
- ATGAAGTATAAATATTTGACAGCGGGCCTGTACCCTCCTCTGCCGGTGGCGACTCCGTGCATCAAAGCGATCTCTCCCAGCGAGGGCTGGACGTCGGGCGGGTCCACTGTGATCATCGTGGGGGACAACTTTTTCGACGGACTGCAGGTCGTTTTCGGGACGATGCTAGTTTGGAGTGAGCTAATAACGTCGCATGCGATCCGAGTGCAGACGCCGCCGCGGCATATTCCCGGTGTGGTGGAGGTCACGCTCTCCTACAAAAGCAAGCAGTTCTGCAAAGGCGCGCCTGGAAGATTCGTCTATGTTTCAGCTCTGAACGAGCCCACGATAGATTACGGGTTTCAGAGGCTGCAGAAGCTCATACCAAGGCATCCTGGTGACCCGGAGAAGTTACCTAAGGAAATAATCCTAAAACGAGCCGCAGACCTAGCAGAAGCGTTATACTCCATGCCGCGGAACAACCAGCTCGGTTTGGGTGCACCCCGCTCCCCGCCAGCCAGCATGCCTTTCAACTCCTACACTGGTCAGCTGGCAGTCAGCGTGCAGGATACAGCGGCCTCGCAGTGGACTGAAGAGGAGTACGCGCGGAGCGGCGGGTCGGTGTCCCCGAGGTACTGCTCGGCTGCATCCACCCCCCACGCCGCCTCCTACCCCCACCCGCAGCACTACCCTGCGCCGCCGACGTCACTTTTCAACACTACCTCGATGTCGCTGGGCCCATATCATCCGGCGAACCTGAATGGACATTTATCATCTGACCATCACCACTATAACGCGTATAACACGAAAGATAGCGGGCATTACAGTGAAAGAAACGAGAATTCAAAAAGCTCGGCTGACTGTCCGGCAAACACTCATACAAAATGCACCGCGAGCGATATGAAAGGGCAGGAGAGTAAAGAGACTAAGCTAAGGAGCGCCTTTGCAGTCGTGAGGCAGAGTCCGCCGCGCGCCGCCAATTTCCAACATCATCAGAACTGGCAACATCTCGCTGTTCAGTGTtag
- Protein Sequence
- MKYKYLTAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAASYPHPQHYPAPPTSLFNTTSMSLGPYHPANLNGHLSSDHHHYNAYNTKDSGHYSERNENSKSSADCPANTHTKCTASDMKGQESKETKLRSAFAVVRQSPPRAANFQHHQNWQHLAVQC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00871085;
- 90% Identity
- iTF_00871085;
- 80% Identity
- -