Basic Information

Gene Symbol
kn
Assembly
GCA_018467065.1
Location
CM031586.1:6347380-6355083[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-114 2.7e-110 370.9 0.0 218 387 2 189 1 194 0.99
2 2 1.1e-08 0.00015 21.8 5.5 420 557 198 346 190 359 0.64

Sequence Information

Coding Sequence
ATGGTGGACGGTCCTCTCCTAGCGATATCAGACAACATGTTCGTGCACAACAACAGCAAGCACGGCCGTCGAGCGAAGCGACTCGACCCCACTGAAGGTATTGACGCCGCTGCCGACCCTACTTCAGGTCTGTACCCGCCTTTGCCCGTAGCCACCCCTTGCATCAAGGCGATATCGCCGAGCGAGGGCTGGACGTCAGGAGGCTCCACTGTCATCATCGTTGGAGACAACTTCTTCGATGGTCTGCAAGTGGTCTTCGGAACCATGCTAGTATGGAGTGAGCTCATAACATCCCACGCGATACGAGTCCAGACGCCGCCGCGACACATTCCAGGCGTGGTGGAGGTCACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAGGGCGCGCCCGGGAGATTTGTCTATGTTTCAGCTCTCAACGAACCGACGATAGACTACGGCTTTCAGAGGCTACAGAAACTAATACCGAGGCATCCGGGCGACCCGGAGAAATTACCAAaggaaataattttaaaaagagcAGCGGACCTAGCCGAAGCCCTATACTCGATGCCTCGGAATAACCAGCTGGGTTTAGGCgccccccgctcccctcccgcGAGCATGCCTTTCAACTCCTACACCGGCCAGCTGGCTGTCAGTGTGCAGGACACCGCTGCCTCACAGTGGACTGAAGAGGAGTACGCCCGCAGCGGCGGGTCGGTATCACCGAGGTATTGCTCCGCTGCGTCCACTCCTCACGCCGCCGCCTCCTACCCACATCCTCAGCACTACCCCGCGCCGCCGACTTCACTGTTCAACACTACTTCCCTGTCTCTCGGACCGTACCACCCTGCGAACTTGAATGGACACTTACCCTCTGACCATCACTATAACGCGTATAATACGAAAGATAGCGGGCATTACACTCAAAGAAATGGCAGCTCAAAAGAGGCTGACTGCCCAGCAAACAGTCATACAAAATGCAATGACAGTGATATGAAAGAGACAAAAGATGGCAAACTGAGAAGCGCCTTTGCCGCGGTGAGACACACCCAGCACCAGAGAATGGGTGGGCTGGTCTCCTCTCCGTTCTCCATGAACCCCTTCTCACTACCAACCTGCAGCGCTCAACAGTACGCGCAGACCGCACCACTAGCATCCAAATAG
Protein Sequence
MVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAADPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAASYPHPQHYPAPPTSLFNTTSLSLGPYHPANLNGHLPSDHHYNAYNTKDSGHYTQRNGSSKEADCPANSHTKCNDSDMKETKDGKLRSAFAAVRHTQHQRMGGLVSSPFSMNPFSLPTCSAQQYAQTAPLASK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00871085;
90% Identity
iTF_00176893;
80% Identity
-