Samb070446.1
Basic Information
- Insect
- Scoparia ambigualis
- Gene Symbol
- kn
- Assembly
- GCA_963921215.1
- Location
- OY992522.1:21120827-21138093[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-119 6e-115 387.1 0.0 209 387 27 222 15 229 0.98 2 2 3.8e-08 0.00088 20.0 4.4 418 469 229 282 223 387 0.78
Sequence Information
- Coding Sequence
- ATGCTCCATGCGTGCTCCATGTCTGGAAATGCGCCCGCGGTCGACAGGTACAGACGCCAGAACTTCAACTTAactcaaaatGTGGTGATATCAACACAAGTAATGGTGGACGGGCCCCTCTTAGCAATATCGGACAACATGTTCGTCCACAACAACAGCAAGCACGGCCGGCGCGCCAAGCGGCTCGACCCGACTGAAGGTATTGACGCGGCGCCAGAGATCTCTTCGGGTCTTTACCCCCCATTACCAGTGGCGACGCCTTGCATCAAGGCGATATCACCGAGCGAGGGTTGGACTTCAGGCGGGTCAACGGTTATCATAGTAGGGGACAACTTTTTCGACGGGCTGCAGGTTGTGTTCGGAACGATGCTAGTTTGGAGTGAGCTGATAACGTCGCACGCGATAAGAGTGCAAACACCGCCGCGGCACATACCCGGCGTGGTGGAAGTGACGCTCTCATACAAAAGCAAACAGTTCTGTAAGGGGGCACCGGGACGATTCGTATATGTTTCTCTCAACGAGCCAACGATAGACTACGGATTCCAAAGGTTGCAAAAACTTATACCAAGGCATCCCGGCGACCCGGAGAAATTACCAAAGGAAATAATCCTCAAACGCGCAGCCGACCTAGCGGAGGCGTTATACTCCATGCCGCGCAACAACCAGCTCGGTTTGAGCGCGCCGCGGTCACCCCCCGCCAGCATGCCATTCAACTCATACACAGGCCAGCTGGCGGTGAGCGTGCAAGATACCGCTGCCTCGCAATGGAATGAAGAGGAGTACGCGCGTAGCGGCGGCTCCGTATCGCCGCGGTACTGCTCCGCCGCGTCGACGCCGCACGCCGCGCCCGCCTCCTACCCCCACCCGCAGCACTACCCCGCGCCGCCGACCTCGCTGTTCAACACTACCTCACTGTCCCTTGGCCCGTATCATCCAGCGAACATGAATGGACATTTATCATCTGACCATCACTATAACGCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAGAGCGGTGACTGTCCGGCAAACACTCATACAAAATGCACCGAGAGCGATATGAAAGGGCCTCATAGTAGAGAGAGTAAACTGAGGAGCGCCTTTGCTGTAGTGAGGCATAGTCCGCCGCGGCCAAATGTTCAGCACCATCAGAATTGGCAGCATCTCGCCGTACAGTGTTAG
- Protein Sequence
- MLHACSMSGNAPAVDRYRRQNFNLTQNVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPEISSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLSAPRSPPASMPFNSYTGQLAVSVQDTAASQWNEEEYARSGGSVSPRYCSAASTPHAAPASYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDHHYNAYNTKDSGHYSERNGNSKSGDCPANTHTKCTESDMKGPHSRESKLRSAFAVVRHSPPRPNVQHHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_00871085;
- 80% Identity
- -