Pcas015141.2
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- kn
- Assembly
- GCA_038024825.1
- Location
- CP149056.1:10087536-10094814[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-119 4e-115 385.7 0.0 205 387 36 237 29 240 0.96 2 2 2.2e-07 0.0013 17.5 7.4 421 511 247 345 238 416 0.58
Sequence Information
- Coding Sequence
- ATGTACGCACACATGCACACGATGCAAGGAAGTGCATACCTATTGGAAGAATTTCGACCATTTCTACTCCCGAGACATTGGCTCCACCTCCCTAGGGACTCTCCCTTTCGGAGGCTCGTCTGTGTGGTAATATCAACGCAAGTGATGGTCGACGGGCCATTGCTGGCGATATCAGACAACATGTTTGTACACAACAACAGTAAACACGGCCGGCGCGCGAAGCGCCTTGACCCGACTGAAGGTATTGACGCGGCCACAGACAACACTTCGGGTTTATACCCTCCGTTGCCAGTGGCAACCCCGTGTATCAAGGCGATCTCTCCCAGCGAAGGTTGGACGTCGGGAGGCTCTACGGTCATTATAGTAGGAGATAACTTCTTCGATGGTCTGCAAGTCGTGTTTGGGACTATGCTGGTTTGGAGTGAATTAATAACATCTCACGCGATACGAGTGCAGACTCCGCCGCGACACATCCCCGGCGTGGTGGAGGTCACGTTGTCCTACAAGAGCAAACAGTTTTGTAAAGGCGCACCCGGGAGATTCGTATATGTTTCAGCTCTCAACGAGCCGACTATAGATTACGGTTTCCAACGGCTGCAGAAGCTAATACCGAGGCATCCTGGTGACCCTGAGAAATTGCCGAAGGAAATCATCCTTAAGCGGGCTGCAGATCTTGCAGAAGCTCTCTACTCCATGCCTCGTAATAATCAGCTTGGTCTTGGGGCGCCGCGCTCTCCACCTGCTAGTGTTCCCTTCAACTCCTACTCGGGGCAACTGGCTGTCAGTGTCCAGGACACGGCCGCCAGCCAGTGGACTGAAGAAGAGTACGCGCGCAGCGGCGGCGGTGGCTCAGTGTCTCCGCGCTACTGCTCCGCGGCGTCCACGCCCCACGCCGCCGCCTACCCGCATCCACAGCACTACCCTGCGCCCCCAACTTCGCTCTTCAATACCACTAGCCTGTCTCTTGGCCCGTATCACCCGTCCAACCTGAATGGGCAGTTATCATCTGACCATCACCACTATAACGCGTATAACACGAAAGATAGCGGGCATTACACTGAAAGAAACGTGAATTCTAAAAGCGCGGCCGACTGTCCGGCAAACACTCATACAAAATGCACCGGCGACGATATGAAAGGGGAGAGTAAAGAGACTAAGCTAAGGAGCGCTTTTGCGGTCGTCAGGCAGAGTCCGCCGCGCGCTGCCAATTTCCAACATCATCAGAATTGGCAGCATCTCGCAGTTCAGTGTtag
- Protein Sequence
- MYAHMHTMQGSAYLLEEFRPFLLPRHWLHLPRDSPFRRLVCVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAATDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASVPFNSYSGQLAVSVQDTAASQWTEEEYARSGGGGSVSPRYCSAASTPHAAAYPHPQHYPAPPTSLFNTTSLSLGPYHPSNLNGQLSSDHHHYNAYNTKDSGHYTERNVNSKSAADCPANTHTKCTGDDMKGESKETKLRSAFAVVRQSPPRAANFQHHQNWQHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_00871085;
- 80% Identity
- -