Basic Information

Gene Symbol
kn
Assembly
GCA_949629135.1
Location
OX451394.1:7946585-7959056[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.1e-143 3.9e-139 465.7 0.0 172 387 19 251 7 255 0.97
2 2 1.2e-07 0.00092 18.7 5.3 420 469 260 311 252 423 0.68

Sequence Information

Coding Sequence
ATGTTGCCGACGTTTGATTTATGTGTCCGCTTCATTTGCAGCATAATATCTGTTCACACGCCCGCCGATATTTTACGGTCCCAGTTTTTCTTGAAGTTCTTCCTGAAATGCAACCAGAATTGTTTGAAAAACGCCGGGAACCCTAGAGATATGAGAAGGTTTCagGTGGTAATATCAACTCAAGTGATGGTCGACGGTCCTCTCCTAGCGATATCAGACAATATGTTTGTCCACAACAACAGCAAGCATGGCCGGAGGGCGAAGCGGCTAGACCCTAGCGAAGGTACAGATGGCGCGACAGACAATACTTCAGGTTTATATCCTCCCCTGCCAGTAGCCACACCATGCATCAAGGCGATATCACCGAGCGAAGGCTGGACGTCGGGAGGGTCGACAGTGATCATAGTAGGGGACAATTTCTTCGATGGACTACAAGTTGTGTTTGGAACCATGCTGGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTCCAGACCCCACCGCGACACATACCGGGCGTTGTGGAGGTGACGCTTTCGTATAAGAGTAAGCAGTTCTGTAAGGGAGCGCCAGGGAGATTTGTTTATGTTTCAGCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCAAGACATCCCGGGGACCCGGAAAAATTACCTAAGGAAATAATCCTAAAACGAGCGGCGGACTTGGCGGAGGCACTATACTCGATGCCTCGCAACAACCAACTAGGGCTGGGCGCGCCGAGATCACCCCCTGCCAGCATGCCTTTCAACTCGTACACAGGACAACTAGCTGTCAGCGTGCAGGATACTGCGGCCTCGCAGTGGACTGAAGAGGAGTACGCGCGCAGTGGCGGCTCGGTATCGCCGCGGTATTGTTCTGCCGCGTCGACGCCGCATGCCGCGCCCGCTGCCTACCCGCACCCACAACACTATCCCGCTCCGCCGACCTCACTCTTCAATACCACGTCTCTGTCTCTAGGACCATACCATCCGGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCCAGGCCGACTGTCCGGTAAACATTCATACAAAATGCACCGGCAGTGATATGAATGGGGCTCAGAATAAAGAGACTAAGCTGAGAAGCGCTTTTGCCGTTGTGAGGCAGAGTCCGCCACGGGTAGCCAATGAGCATCATCAGAATTGGCACCACCTCGCCGTTCAGTGTTag
Protein Sequence
MLPTFDLCVRFICSIISVHTPADILRSQFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDGATDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSQADCPVNIHTKCTGSDMNGAQNKETKLRSAFAVVRQSPPRVANEHHQNWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00871085;
90% Identity
iTF_00176893;
80% Identity
-