Tvir015989.3
Basic Information
- Insect
- Tortrix viridana
- Gene Symbol
- kn
- Assembly
- GCA_963241965.1
- Location
- OY725184.1:9578864-9586087[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-118 2.4e-114 383.4 0.0 209 387 38 234 28 237 0.98 2 2 2.8e-08 0.0002 20.5 9.6 421 527 244 352 235 415 0.60
Sequence Information
- Coding Sequence
- ATGCACGCGGTGCAAGGAAGTGCATATCTATTGGAAGAGTTTCGTCCATTTTGGCTCCGAGACATTGGCTCCTCCTCCCAAGGGACTCTCCCTTTCAGCCGTGCATCTGTGTGTGTGGTAATATCCACACAAGTGATGGTCGATGGCCCCTTGCTGGCGATATCGGACAATATGTTTGTCCACAACAACAGCAAGCACGGCCGCCGCGCCAAGCGGCTCGACCCGACTGAAGGTATTGACGCCGCGACTGAAAACACTTCGGGTCTGTACCCCCCCCTGCCGGTGGCGACGCCGTGCATTAAAGCGATCTCGCCCAGTGAAGGATGGACGTCAGGAGGCTCGACAGTCATCATCGTGGGAGACAACTTCTTCGACGGGCTTCAAGTCGTCTTTGGGACTATGCTAGTTTGGAGTGAGCTAATAACATCGCACGCGATAAGAGTGCAGACGCCTCCTCGGCATATTCCTGGCGTGGTGGAAGTCACGTTGTCATACAAAAGCAAGCAGTTCTGCAAAGGCGCGCCCGGACGATTCGTCTATGTTTCAGCGCTTAACGAGCCCACGATAGATTACGGGTTCCAGAGGCTGCAGAAGCTGATACCTAGGCATCCTGGAGATCCTGAGAAGTTACCAAAGGAAATAATCCTCAAAAGAGCAGCAGACCTGGCCGAAGCCCTGTACTCTATGCCCAGGAACAACCAGCTAGGGCTTGGGGCGCCGCGGTCGCCTCCCTCCAGCATGCCTTTCAACTCCTACTCGGGTCAGCTGGCCGTGAGCGTCCAGGACACCGCGGCCTCCCAGTGGACTGAAGAGGAGTACGCGCGAAGCGGCGGGTCCGTGTCGCCCCGGTACTGCTCGGCGGCCTCCACCCCCCACGCCTCGTACCCCCACCCGCAGCACTACCCCGCGCCCCCCACCTCGCTCTTCAACACCACCTCGATGTCCCTGGGCCCGTATCATCCGGCGAACCTGAATGGGCATTTATCATCTGACCATCACCACTATAACGCGTATAACACGAAAGATAGCGGGCATTACAGTGAAAGAAACGCGAATTCAAAAAGCTCGGCTGACTGTCCGGCAAACACTCATACAAAATGCACCGCGAGCGATATGAAAGGGCAGGAGAGTAAAGAGACTAAGCTAAGGAGCGCCTTTGCTGTCGTCAGGCAGAGAATGGGAGGCCTGGTGTCGTCACCTTTTAGCGTTAATCCGTTCTCCCTTCCTACGTGTAGCGCGCAACAGTACGCGCAACAGGCGCAACTCGCTTCCAAGTAA
- Protein Sequence
- MHAVQGSAYLLEEFRPFWLRDIGSSSQGTLPFSRASVCVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAATENTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPSSMPFNSYSGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHASYPHPQHYPAPPTSLFNTTSMSLGPYHPANLNGHLSSDHHHYNAYNTKDSGHYSERNANSKSSADCPANTHTKCTASDMKGQESKETKLRSAFAVVRQRMGGLVSSPFSVNPFSLPTCSAQQYAQQAQLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00871085;
- 90% Identity
- iTF_00871085;
- 80% Identity
- -