Hruf047456.1
Basic Information
- Insect
- Harpalus rufipes
- Gene Symbol
- SMARCC2
- Assembly
- GCA_951394225.1
- Location
- OX596286.1:6888625-6891447[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.4 2.7e+04 -2.8 0.1 2 10 167 175 166 176 0.78 2 4 0.86 2.8e+03 0.4 0.0 33 44 197 208 190 210 0.86 3 4 4.7e-13 1.5e-09 39.6 0.2 3 40 586 623 584 628 0.93 4 4 7.6 2.5e+04 -2.6 0.0 5 18 856 869 856 870 0.85
Sequence Information
- Coding Sequence
- ATGATAGCGTTTGGTCCAAAAAAGGATGGCAGCCCAAATGCAAAGTTTTTCGAATCTTCCGAAACTATTACTTTATTTGATGGAATACGACAatggttattaaaaaattgtaaaacgtATGTGCAAGCGGATCCACcaacaaataaaagtttagcTGCACTTGTAGTACAGTTACTTCAATTCCAAGAAGATAACTTTAGCAAAAATGCAAGTAAACCGGCATTAACTAGAATTCCTATGAAATGTTTTATGGATTTTAAAGTAAATGGTggtttatatcatattttagcAACAGCATACAGATATAAAAGTGAGCAAGCATGGAGAAGGTTCGATTTACAGAGCCCTTCTCGATTAGATCGCAATATAGAAATGTTTATTGCAATTGAACGTGTATTGGTACAAAACAAATGTCTTACAATACCTATTGTTTATATTAGACCGGAAGTAGATAAAGCAACTGCAAGCAAAGCAAAGGAAGTTTTGAAACGACGTCAAGGAAAATGGAGTGAAATTGAACATGAAGCAACTCACGTATTATACCCACACTGTGATCCGTCAGAAGAAGAATATGCAAGACCGACAATGCGGCGTGATAAAAATGTTATGTTACATTGGTATTACTTTCCAGATTCATATGATACATGGGTAAATACTGAATTGAATTTGGATGTGCCAGAAAACGCTATACAGCAGACAGGTCAATGGCGCGTAAGCATCTCATGGCTGTTGGAAAGCGATCAGTACAATGAGTGGATGACGGAAGAAGACTATGAAGTTGACGAATCGGGCCGGAAGAAGGTTCACAAGTTACGGATGTCCGTAGAGGACTTGATGAATCCTGCGGGAGACTTAGACCGCAGCAAAAAGAAACGAAAACGTTCTCCATCGCCGCCTTTGCCTTTGAAACAGGGCAAGAGGAAAAGTGGCCGCAGTCCAGCTGTAGGTAACAAGAAACATAGATTCGGAGATGATATTGAAACTGAAGATTTAACTAAAGACATGGACGACCCAGTTCCCGAGCCTAATGTTGTAGAAGTGCTAGTCTCGAAACATTGCCCGACTAACGTTACAAACAAAAAAGACCACGAATTGCAACCGCTAAAAGGTGGATCTATGACCGATTTGGACGAGACAGAGGACAAGGGCGATGACTCGCAAATGAGTAAAACTAGTGATACAAACACACAAGAGGATAGTGTTACCGAACAAACTCATCATATCGTAGTGCCCTCATATTCTACTTGGTTTGATTATAATTCAAttcatattattgaaaaaagagCGCTTCCGGAATTTTtcaatggaaaaaataaatcaaaaacaccAGAACTCTATTTAGCCTACAGAAATTTTATGATTGACACTTACCGTTTAAATCCAACGGAATATATAACTAGTACAGCATGTAGACGCAATCTAGCGGGTGACGTATGCGCTATAATGAGAGTCCATGCCTTTCTGGAGCAGTGGGGTTTAATAAACTATCAAGTTGATACTGAATCGCGACCAACAGCAATGGGCCCACCACCCACCTCACACTTCCATGTGTTgtctgatactccatctggctTACAGCCTGTCAATCCATCTAAAACACCCCAGCCAAGTCCTGCCAAGTCTTTACTCGACCTCGACAAAAATGATGTGAAGAAGTCGGACGTCGAACTGCCAATACACTTTGGTTTGAAGCTTGACCAATACATCCGTAAACCAGCTGTTATGCGTAACAAAACTGCTGCTTCCTTAACTAGAGATTGGACAGAACAGGAGACACTGCTTTTGTTAGAGGGTCTCGAAATGTACAAGGATGATTGGAACAAAGTGTGTGAACATGTCGGTACGCGGACTCAAGATGAGTGTATATTGAACTTTCTTCGGTTTCCGATTGAAGATCCGTATTTGGAAGATCACGAAGCCGGTGGCGCATTAGGACCTCTTGCATATCAACCTGTACCGTTCAGTAAATCTGGCAATCCAATAATGTCAACAGTTGCGTTCTTGGCTTCAATTGTTGATCCTCGAGTTGCGGCTGCCGCAGCAAAATCAGCCATGGAAGAATTTGCGAAAATAAAAGATGAAGTGCCAGCCGCTTTATTAGATGCACAATTAAAAAATGTCGAGGCTTCTACTACAGATGGAAAATATGATCCTGTTGCTGGTTTAGCTAGCAGTGGCATCGCAGGCACGTTAcctgaaaaagaagaagatgacaaGCTAAAGAAAGACTCCGAACTAAAAGAGGAAGAATGCGAAAAGCCTGTTAGTGAGTGTAGTGACCAAAAGAAAAATGGAATTGAACGATCTGAACCTATGGAAATTGATAAAATTGAAGATAAAGTGAAATTGGAATCAAATGTAACAGTAAACGAAGAGACCCGTTCCGAAAGTGGTAGCAGAGATAGAGATCAATCCAGTAGTAAGGCTTCGGAAGAAGGTACGTgtacaacaacaataacaacaacaactCAAATAGAAACTACCGCAAAAACAATAAAAGATGCTCAAATGCAAATGGCTGCGGCAGCTGCTTTATCCACAGCGGCTGTAAAAGCGAAACACTTATCTGCTGTAGAAGAGaggaaaataaaatcattagtaGCATTGTTAGTGGAAACACAGATGAAGAAACTGGAAATAAAATTACGCCATTTCGAAGAGCTAGAAACAACAATGGAGAGAGAACGGGAGGGACTGGAGCATCAACGGCAGCAGCTTATTACAGAACGACAGCAGTTCCACTTGGAGCAATTGACAGCTGCTGAGTTCCGCGCCCGTCAACAAGCTCATCAGCGTTTGCAGGCAGAGGAAGGAGGCCAGTGA
- Protein Sequence
- MIAFGPKKDGSPNAKFFESSETITLFDGIRQWLLKNCKTYVQADPPTNKSLAALVVQLLQFQEDNFSKNASKPALTRIPMKCFMDFKVNGGLYHILATAYRYKSEQAWRRFDLQSPSRLDRNIEMFIAIERVLVQNKCLTIPIVYIRPEVDKATASKAKEVLKRRQGKWSEIEHEATHVLYPHCDPSEEEYARPTMRRDKNVMLHWYYFPDSYDTWVNTELNLDVPENAIQQTGQWRVSISWLLESDQYNEWMTEEDYEVDESGRKKVHKLRMSVEDLMNPAGDLDRSKKKRKRSPSPPLPLKQGKRKSGRSPAVGNKKHRFGDDIETEDLTKDMDDPVPEPNVVEVLVSKHCPTNVTNKKDHELQPLKGGSMTDLDETEDKGDDSQMSKTSDTNTQEDSVTEQTHHIVVPSYSTWFDYNSIHIIEKRALPEFFNGKNKSKTPELYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESRPTAMGPPPTSHFHVLSDTPSGLQPVNPSKTPQPSPAKSLLDLDKNDVKKSDVELPIHFGLKLDQYIRKPAVMRNKTAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILNFLRFPIEDPYLEDHEAGGALGPLAYQPVPFSKSGNPIMSTVAFLASIVDPRVAAAAAKSAMEEFAKIKDEVPAALLDAQLKNVEASTTDGKYDPVAGLASSGIAGTLPEKEEDDKLKKDSELKEEECEKPVSECSDQKKNGIERSEPMEIDKIEDKVKLESNVTVNEETRSESGSRDRDQSSSKASEEGTCTTTITTTTQIETTAKTIKDAQMQMAAAAALSTAAVKAKHLSAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEHQRQQLITERQQFHLEQLTAAEFRARQQAHQRLQAEEGGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01229665; iTF_00903078; iTF_01104262; iTF_01225604; iTF_00028683; iTF_01040802; iTF_01040053; iTF_01039164; iTF_01275211; iTF_00469567; iTF_00766447; iTF_00768181;
- 90% Identity
- iTF_01104262; iTF_00766447; iTF_00768181;
- 80% Identity
- -