Pcup013584.1
Basic Information
- Insect
- Poecilus cupreus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963942605.1
- Location
- OZ012715.1:27236877-27239673[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.5 1.7e+04 -2.4 0.1 3 10 46 53 44 54 0.83 2 3 0.91 2.3e+03 0.4 0.0 33 44 75 86 70 88 0.86 3 3 3.7e-13 9.3e-10 40.0 0.1 3 42 473 512 471 516 0.93
Sequence Information
- Coding Sequence
- ATGGAAATGTTTGTGTCTATAGAACGAGCTTTGGTACAAAACAAATGTCATACGATACCTATTGTATGTGCTAGACCGGAAGTAGACAAAACAACTGCCGGCAAAGCAAAAGAATTAATAAAACGTCACCAAGGAATATGGACTGAAGTGGAAGATGATGCGACTCATATATTATACCCGCAGTGTGATCCCTTAGAAGAAGAATATGCAAGACCTACAATGCGAAGAGACAAAAATGTTATGCTGCATTGGTATTACTTTCCAGATTCATATGATACGTGGGTAAATACGGAATTAAGTTTAGACGTACCAGAAAATCCTGTGCAGCATACAGGCCAGTGGCGTGTAAGCATATCCTGGTTGATAGAAAGCGACCAGTACAACGAGTGGATGACCGAAGAGGATTACGAAGTGGATGAAGCAGGGAGAAAGAAAGTTCATAAACTGCGAATGTCTGTAGAGGACCTGATGAATCCAGCAGGAGATCTCGATCGCAGTAAAAAGAAGCAGAAACGAAAACGGTCACCATCGCCACCACTGAAACAAGGGAAGAGAAAAAGCGGTCGCAGTCCCGCTGTTGGTAACAAAAAACACAGATTCGGTGATGACATTGAAACAGAAGATCTTACGAAAGACATGGATGATCCCGTTCCTGAGCCCAATGTTGTAGAAGTAGCAGTAGCGAAACCATGCCCAACAAGTGTGACAAACAAGAAGGATCACGAATTACAGCCTCTCAAAGGTGGTTCAATGACGGATTTAGATGAGGCAGAGGACAAAGGCGATGACTCGCAGATGGGTAAGACAAGTGATACAAATACACAGGAGTTCATGAGTAAAGACGATGGACAAGAGGATAATGTTACTGAACAGACACATCATATCGTAGTACCATCATACTCTGCTTGGTTTGATTATAATTCTATTCATGTCATTGAGAAGAGAGCTTTGCCAGAGTTTTTCAATGGGAAGAATAAGTCAAAGACGCCCGAGATCTACTTGGCATACAGGAATTTCATGATCGATACATATCGCCTTAACCCGACTGAGTACATCACCAGTACGGCATGTAGGCGGAACTTAGCAGGTGATGTGTGTGCAATCATGCGGGTACATGCTTTTCTGGAACAGTGGGGTTTGATTAATTACCAGGTTGACACGGAATCCCGACCAACAGCAATGGGACCTCCGCCCACATCACACTTCCATGTACTGTCTGATACGCCGTCTGGTTTACAGCCTGTTAATCCGCCGAAGACTCCGCAGCCAAGTGCAGCTAAATCTCTGCTTGATTTGGACAAAAACGACATTAAGAAAATAGACACTGAGCAGCCAATGCAATTTGGCTTGAAACTGGATCAGTATGTCCGTAAGCCCGCCGCCATGCGCAACAAGACTGCAGCGTCGCTTACCAGGGATTGGACCGAACAAGAAACATTACTTTTACTTGAAGGTTTAGAGATGTATAAAGATGACTGGAACAAAGTTTGCGAACACGTGGGTACACGAACACAAGATGAATGCATACTGAATTTCCTCCGCCTACCCATTGAGGATCCGTACCTTGAAGATCACGAGGCCGGCGGAGCTTTAGGGCCTTTAGCTTATCAGCCTGTACCATTCAGTAAATCAGGTAACCCAATTATGTCCACAGTAGCATTCCTGGCTTCAATTGTCGATCCTCGAGTGGCGGCAGCTGCAGCTAAGTCGGCCATGGAGGAGTTTGCAAACATCAAAGATGAAGTACCAGCCGCCTTGCTCGATGCACACTTAAAAAATGTGGAGGCTTCATCAACAGACGGAAAATATGATCCAGCTGCAGGATTAGCTAGCAGTGGCATTGCTGGAACTCTGCCGGAAAAGGAGGAGGAAGATAAATTAAAGAAGGACACAGAATTGAAGGAAGAAGAATGCGAGAAGCCAGCTAGTAATGCTAGTGAATGCAGTGATCAGAAAAAGAACGGAATTGAACGTCAAGAACCAATGGAGATTGACAAAATAGAAGATAAAGTAAAATTGGAGTCCACGGTCACCGTTAAAGAAGAAGCGCGTTCAGAAAGCAGTAGCAGAGATCAGTCGAGCACAAAAGATTCGGAAGAGGGTACGTCTACAGGTGGTCAGGGCGAGCCGACACAAAAAACCGTAAAAGATGCACAAATGCAAATGGCTGCTGCAGCAGCGTTGTCGGCTGCGGCAGTAAAGGCAAAACACCTAGCCGCTGTAGAGGAAAGGAAGATCAAATCATTAGTAGCGTTATTGGTAGAGACACAGAtgaaaaaattggaaataaagTTACGACATTTTGAGGAACTGGAAACGACGATGGAACGAGAACGGGAAGGATTGGAATACCAGCGGCAGCAGCTAATAACGGAGCGTCAACAGTTCCACCTGGAGCAGTTGAAGGCTGCAGAGTTTCGAGCACGTCAACAAGCCCATCAGCGAATGCAAGCAGAACAAGGCGGCCAGTGGCATCAGCCCGTTCTGCACCCACCCGGCTCTGCAGCCGGTCCTGGCCCTGGCCCTGGCCCTGGCTCCGCAACTTCAACACCAAACTCAGATGTAAGTACAAGTACAATCTATAGCATAGTGTCCTATGCCGGTTACTACGCAGGTAGCGGCGGTACTCAGTTAACCAATATGCCTCAATCCAATGATGCAAATCAGACGTCAACTCCCACTCCACCTTCGCCTCAAGCCGCTGTCGTCACCAATCCGCCCGTTCCTCATCAAGCATCGATGTAG
- Protein Sequence
- MEMFVSIERALVQNKCHTIPIVCARPEVDKTTAGKAKELIKRHQGIWTEVEDDATHILYPQCDPLEEEYARPTMRRDKNVMLHWYYFPDSYDTWVNTELSLDVPENPVQHTGQWRVSISWLIESDQYNEWMTEEDYEVDEAGRKKVHKLRMSVEDLMNPAGDLDRSKKKQKRKRSPSPPLKQGKRKSGRSPAVGNKKHRFGDDIETEDLTKDMDDPVPEPNVVEVAVAKPCPTSVTNKKDHELQPLKGGSMTDLDEAEDKGDDSQMGKTSDTNTQEFMSKDDGQEDNVTEQTHHIVVPSYSAWFDYNSIHVIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESRPTAMGPPPTSHFHVLSDTPSGLQPVNPPKTPQPSAAKSLLDLDKNDIKKIDTEQPMQFGLKLDQYVRKPAAMRNKTAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILNFLRLPIEDPYLEDHEAGGALGPLAYQPVPFSKSGNPIMSTVAFLASIVDPRVAAAAAKSAMEEFANIKDEVPAALLDAHLKNVEASSTDGKYDPAAGLASSGIAGTLPEKEEEDKLKKDTELKEEECEKPASNASECSDQKKNGIERQEPMEIDKIEDKVKLESTVTVKEEARSESSSRDQSSTKDSEEGTSTGGQGEPTQKTVKDAQMQMAAAAALSAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRMQAEQGGQWHQPVLHPPGSAAGPGPGPGPGSATSTPNSDVSTSTIYSIVSYAGYYAGSGGTQLTNMPQSNDANQTSTPTPPSPQAAVVTNPPVPHQASM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00768182;
- 90% Identity
- iTF_01275211;
- 80% Identity
- -