Hrub053759.1
Basic Information
- Insect
- Harpalus rubripes
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963082715.1
- Location
- OY720458.1:49220513-49224064[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.12 6e+02 2.9 0.1 14 43 160 207 157 210 0.66 2 2 3.5e-13 1.8e-09 39.8 0.1 3 42 600 639 598 643 0.93
Sequence Information
- Coding Sequence
- ATGATAGCGTTTGGTCCAAAAAAGGATGGCAGCCCAAATGCAAAATTCTTCGAATCTTCAGAAACTATTACATTATTTGATGGAATACGGCAATGGTtactaaaaaattgtaaaaagtATGTGCAAGCAGATCCTCCAACAAATAAAAGTTTGGCTACACTTGTAGTACAGTTACTTCAATTCCAAGAAGATAACTTTAGCAAAAATGCAACTAAACCGGCATTAACTAGAATTCCTatGAAATGTTTTATGGATTTTAAAGTAAATGGTGGTTTATGTCATATTTTAGCAACAGCATACAGATATAAAAGTGAGCAAGCATGGAGGCGGTTCGATTTACAGaGCCCTTCTCGATTAGATCGCAATATAGAAATGTTTATTGCAATTGAACGTGTATTGGTACAAAACAAATGTCTTACAATACCAGTTGTTTATGTTAGACCGGAAGTAGATAAAGCAACTGCAAGCAAAGCAAAGGAAGTTTTGAAACGACATCAAGGAAACTGGAGTGAAATCGAAGATGAAGCAACGCATGTATTATATCCACACTGTGATCCGCTAGAAGAAGAATATGCAAGACCGATAATGCGGCGTGATAAAAATGTTATGTTACATTGGTATTACTTTCCAGATTCATATGATACATGGGTAAATACTGAAGTGAATTTGGATGTGCCAGAAAACCCCATACAGCACACAGGTCAGTGGCGTGTAAGTATCTCATGGCTGTTGGAAAGCGATCAGTACAATGAATGGATGACTGAAGAAGACTACGAAGTCGACGAATCGGGTCGGAAGAAGGTTCACAAATTACGGATGTCCGTAGAGGACTTGATGAATCCCACGGGCGCGGGAGACCTAGACCGCagtaaaaagaaacaaaaacgAAAACGTTCTCCATCGCCGCCTTTGCCTTTGAAACAGGGCAAGAGGAAAAGTGGACGCAGTCCAGCTGTAGGCAATAAGAAACATAGATTCGGTGATGATATTGAAACAGAAGATTTAACTAAAGACATGGACGACCCAGTTCCCGAGCCTAATGTTGTTGAAGTGCAAGTATCAAAACCGACTAATCCGACTAATGTTACAAACAAAAAAGACCACGAATTGCAACCGCTAAAGGGGGGATCTATGACCGATTTGGACGAGACAGAAGACAAAGGCGAAGACTCCCAGATGGGTAAAACTAGCGACACAAATACACAAGAATTCATGAGTAAAGATGATGCTCAAGAGGATAATGTTACTGAACAAACTCATCATATCGTAGTGCCCTCATATTCTGCGTGGTTTGATTATAATTCAATTCATGTTATTGAAAAAAGAGCGCTGCCAGAATTTTTCAATgggaaaaataaatcaaaaacgcCAGAAATCTATTTGGCATATAGAAATTTTATGATCGACACTTACCGGTTAAATCCAACCGAATATATAACAAGTACAGCTTGCAGACGCAATCTTGCGGGTGACGTATGTGCCATAATGAGAGTACATGCGTTTTTGGAGCAGTGGGGTTTAATAAACTATCAAGTTGATACTGAATCGCGACCAACAGCAATGGGACCACCGCCCACCTCACATTTCCATGTGTTGTCTGATACCCCATCTGGCTTACAGCCTGTCAATCCACCTAAAACACCGCAGCCAAGCGCTGCCAAGTCTTTACTTGACCTCGACAAAAACGATGTGAAGAAGTCGGACTCTGAACAGCCAATGCACTTTGGTTTGAAGCTGGACCAGTACGTCCGGAAACCAGCTGCTATGCGCAACAAAACTGCTGCCTCCTTAACTAGGGATTGGACGGAACAGGAGACATTGCTTTTATTAGAGGGTCTCGAAATGTACAAGGATGATTGGAACAAAGTGTGTGAACATGTGGGCACGCGGACTCAAGATGAGTGTATTTTGAACTTTCTTCGGTTACCGATTGAAGACCCGTATCTGGAAGATCATGAAGCTGGTGGTGCTTTAGGACCTCTTGCATATCAACCTGTACCGTTTAGCAAGTCTGGCAATCCAATAATGTCAACAGTTGCGTTCTTAGCTTCAATTGTTGATCCTCGAGTTGCGGCTGCTGCAGCCAAGTCGGCTATGGAAGAatttgcgaatataaaagatgAGGTGCCAGCCGCCTTATTAGATgcacatttaaaaaatgtcgagGCTTCTACTACAGATGGAAAATATGATCCCGCTGCTGGTTTAGCTAGCAGTGGCATCGCAGGTACATTACCTGAAAAAGACGAAGAAGACAAGCTAAAGAAAGACTCGGAACTAAAAGAGGAAGAATGCGAAAAGCCTGTTAGTGAGTGTAGTGACCAAAAGAAAAATGGAATCGAACGATCTGAACCTATGGAAATTGATAAAATTGAAGATAAAGTGAAACTGGAATCAAATGTAACAGTGAAAGAAGAGACTCGTTCCGAAAGCGGTAGCAGAGATAGAGATCAATCTAGTAGTAAAGATTCGGAAGAAGGTACTTGTACAACAACTACGACAACAACAACAACTCAAATCGAAAGTGCCGCAAAAACAATAAAAGATGCACAAATGCAAATGGCTGCGGCAGCTGCTTTGTCCGCTGCTGCCGTAAAAGCGAAACACTTGGCTGCTGTAGAAGAGAGAAAAATCAAATCATTAGTAGCATTGCTAGTGGAAACACAGATGaagaaattagaaataaaattacgGCATTTCGAAGAGCTAGAAACAACAATGGAGAGAGAACGAGAGGGTCTGGAGTATCAACGGCAGCAGCTTATTACAGAACGGCAGCAGTTTCACTTGGAGCAATTGAAGGCTGCTGAGTTCCGTGCCCGTCAGCAAGCTCATCAGCGTTTGCAGGCAGAGCAAGGAGGCGGAGGCCAGTGGCACCAGCCCGTGCTGCATCCCCCCGGGGCTGCGACTGCTCCAACCACTTCGACGCCCAACTCAGGTAGCATAGTGTCGTATGCCGGTTACTACGCAGGTAGCGGAGGTTCTCAACTGACAAACATGCCTCAGTCGAATGATACAAATCCATCGTCAACGCCCACACCACCTTCGCCCCAAGCTGCAGTTGTTTCCAATCCGCCCGTTCCTCATCAAGCCACAATGTGA
- Protein Sequence
- MIAFGPKKDGSPNAKFFESSETITLFDGIRQWLLKNCKKYVQADPPTNKSLATLVVQLLQFQEDNFSKNATKPALTRIPMKCFMDFKVNGGLCHILATAYRYKSEQAWRRFDLQSPSRLDRNIEMFIAIERVLVQNKCLTIPVVYVRPEVDKATASKAKEVLKRHQGNWSEIEDEATHVLYPHCDPLEEEYARPIMRRDKNVMLHWYYFPDSYDTWVNTEVNLDVPENPIQHTGQWRVSISWLLESDQYNEWMTEEDYEVDESGRKKVHKLRMSVEDLMNPTGAGDLDRSKKKQKRKRSPSPPLPLKQGKRKSGRSPAVGNKKHRFGDDIETEDLTKDMDDPVPEPNVVEVQVSKPTNPTNVTNKKDHELQPLKGGSMTDLDETEDKGEDSQMGKTSDTNTQEFMSKDDAQEDNVTEQTHHIVVPSYSAWFDYNSIHVIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESRPTAMGPPPTSHFHVLSDTPSGLQPVNPPKTPQPSAAKSLLDLDKNDVKKSDSEQPMHFGLKLDQYVRKPAAMRNKTAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILNFLRLPIEDPYLEDHEAGGALGPLAYQPVPFSKSGNPIMSTVAFLASIVDPRVAAAAAKSAMEEFANIKDEVPAALLDAHLKNVEASTTDGKYDPAAGLASSGIAGTLPEKDEEDKLKKDSELKEEECEKPVSECSDQKKNGIERSEPMEIDKIEDKVKLESNVTVKEETRSESGSRDRDQSSSKDSEEGTCTTTTTTTTTQIESAAKTIKDAQMQMAAAAALSAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGGGGQWHQPVLHPPGAATAPTTSTPNSGSIVSYAGYYAGSGGSQLTNMPQSNDTNPSSTPTPPSPQAAVVSNPPVPHQATM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00768182;
- 90% Identity
- iTF_00768182;
- 80% Identity
- -