Basic Information

Insect: Frieseomelitta varia
Gene Symbol: RREB1
Assembly: GCA_011392965.1
Location: WNWW01000894.1:80711-108342[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.049 3 7.7 0.2 1 23 39 61 39 61 0.95

2 16 4.3e-06 0.00027 20.5 4.1 1 23 75 97 75 97 0.98

3 16 8.9e-07 5.5e-05 22.6 1.2 1 23 103 126 103 126 0.98

4 16 0.068 4.2 7.3 0.2 2 23 234 257 233 257 0.93

5 16 0.14 8.6 6.3 2.9 2 23 263 285 263 285 0.94

6 16 1.2 77 3.3 0.6 1 19 341 359 341 361 0.89

7 16 0.13 8.3 6.3 0.1 1 23 473 495 473 495 0.96

8 16 1.9e-05 0.0012 18.4 0.3 1 23 504 526 504 526 0.98

9 16 0.00083 0.051 13.3 2.8 1 23 532 555 532 555 0.97

10 16 0.00044 0.027 14.1 2.8 1 23 932 955 932 955 0.96

11 16 0.00033 0.02 14.5 0.1 3 23 1220 1240 1218 1240 0.97

12 16 0.17 10 6.0 6.9 1 23 1246 1269 1246 1269 0.97

13 16 0.0028 0.17 11.6 2.2 1 23 1307 1331 1307 1331 0.97

14 16 0.31 19 5.2 4.8 1 23 1414 1437 1414 1437 0.96

15 16 0.0075 0.46 10.3 0.4 2 23 1488 1509 1487 1509 0.94

16 16 0.88 55 3.7 8.2 1 23 1515 1537 1515 1537 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.049	3	7.7	0.2	1	23	39	61	39	61	0.95
2	16	4.3e-06	0.00027	20.5	4.1	1	23	75	97	75	97	0.98
3	16	8.9e-07	5.5e-05	22.6	1.2	1	23	103	126	103	126	0.98
4	16	0.068	4.2	7.3	0.2	2	23	234	257	233	257	0.93
5	16	0.14	8.6	6.3	2.9	2	23	263	285	263	285	0.94
6	16	1.2	77	3.3	0.6	1	19	341	359	341	361	0.89
7	16	0.13	8.3	6.3	0.1	1	23	473	495	473	495	0.96
8	16	1.9e-05	0.0012	18.4	0.3	1	23	504	526	504	526	0.98
9	16	0.00083	0.051	13.3	2.8	1	23	532	555	532	555	0.97
10	16	0.00044	0.027	14.1	2.8	1	23	932	955	932	955	0.96
11	16	0.00033	0.02	14.5	0.1	3	23	1220	1240	1218	1240	0.97
12	16	0.17	10	6.0	6.9	1	23	1246	1269	1246	1269	0.97
13	16	0.0028	0.17	11.6	2.2	1	23	1307	1331	1307	1331	0.97
14	16	0.31	19	5.2	4.8	1	23	1414	1437	1414	1437	0.96
15	16	0.0075	0.46	10.3	0.4	2	23	1488	1509	1487	1509	0.94
16	16	0.88	55	3.7	8.2	1	23	1515	1537	1515	1537	0.98

Sequence Information

Coding Sequence: atggattacTCGACGAAAGTTACTGTCAAAAGTGGCTCCGAGCAAAGATCTGAGAGTGAAGCGCAAGCCGATGCTGCCTCGTCCCCATCCAGTGTTGAATTACCGGAGAGCGCGCACTCGTGCCCGGCCTGTTCGGCCGTGTTGCCCACCTCCGGCGACCTGACGAACCATATACACGGCCACAACTCGTCCCGCAGCACGGACTGCAGCGGCGAGGACGAGTACTGCTGCAACATGTGCAACAGGATGTTCAGCTCTTCCAGTTCCCTCAACAGGCACTTGTCGATGCACGCAGGTGCCCGGCCGTACAAGTGCAAGTACTGCGAGATGGCGTTCACCACGAACGGGAACATGAACAGGCACCTGAAAACAGCGCACAGAGGCGTGTCGCCGCACAGCTGCACGGATTCCGAGGCAAGTACCAGCGGCAGTAACAGCAGCGACTCGGAGAAATCCAAGAGGCGACATCTCGAGGAGTACAACAACAACGAGATCACCAAGAGGAACTCGCCGGACTACGTCGATCGGCGAGATGAGGAGGAGATGGAtcaggaggaggaggaggaagagctGTCGTTGTCGTTGCCAGCGAAGAGGAAGTACTCGGGCGACAACGAGACGCACAAGAGGCACAAGATCCTTCTGAACAGCTCGAGGACGGAAATGAAGCCAAGGCCGGACGACGGCCAGAACATCTGCACCTGTCCGGTGTGCGGCCGACAGGACTTTGGCAGTAGCGCACTCTTGGAGGCGCATCTGGAACGAAACCATCCGGAGTTCCCCGCGAAATGCGACAGTTGCAACCTGTCGTTCAAAAACCACCGGGTGCTGAATCTCCATCGGTTCATGATACACTTCGCGGAACACCCGGTGGGGAACACGGCGAGGAATCTGCGAAACTCCGTGGTCGGTTTCAACGATTTGACGTTCGTCGACTTCTCGTCGGGCAAATTTCCAGCGATCGCCAGGGCCGTGTGCGAGCAGTCTCTTCATCGGCCGGCCTCCGGCGAGGTGGCCAAGTTCCAGTGCTCCAAGTGTCTGCGAGCGTTCCCCTGTAGATCGGCGTTGGACGCTCACGAGACCGACTGCGGCATCACCAACTCTCAGAGCCGAACGAACGACGGCCAGTCGAGGAGGGACGACTTCTTCGCTGGCCTGGACTTGCAGAACAAGGCAGCGCTGACGGAGgcgaaagaagggaaagatCTGGCCGACATACAGAGCATCATTAGCGTCACGTCTGGCCCGATACTGCAGAATTTCCCACGATCGGACGCGAGCACACCCGAGAATGTCAAGTTCAATCCAGGCGCCAGCTCATCGGGCTCGTCCGGCACGTACTCCTCGGAGTATCACGAGGAAGAGGCGCAGGATGCGTTCGCCGCTGAATTCCGAAGGATGAAACTGAAGGGGGAGTTCCCTTGCAGGCTATGCTCCGCGATATTCCCAAACCTGAGGGCGTTGAAGGGTCACAACAGAGCTCACATGGGCGTTGGACCAGGCATGCCATACCCGTGCAACATGTGTCCCTACACCAGCACCGACAAGGCAACGCTGGTGAGACACCTGAGATCCCACAACGGCGACAGACCGTACGAATGCTCCCTCTGCAACTACGCATTCACCACCAAGGCGAACTGCGAACGCCACGTGCGCAACCGCCACGGGAAACTGACCAGAGAGGACATCAAGAGCGTCCTCATCTACCACCCGAACGAGGACTCGACGAACGAGAACGTGGAACGAACCTCGCCGAGAGTGACGAAGGACGAGGTGAGGAAGAGCTTGGTTTTCCCGACCGAGCGAGGCGATCACCTTCATCACCAGGCGCAGGTGCACTATCCTCCACCGATCAGAGGAGAAATTAGGATAATAGAAGAAGCGAAACTGCACAACGCCGCGATGGGGGCGGCACACCACGGTGTGATGAACCACTGCGACAAGAGCGAGGCGTTCACGAGGCTCGGCCAGCCCATGGCGATGATCCAAGCGCGCGGCAACGACGGAAAGCCCGGCCAGGATGCCAAGTCGGACTATTCGAAGCTGGACGACGACCTGGAATCGAGATCGTCCGAAGGTAGCGTGTCTCTAGTCACCGAAACGAAGTCAGAACCGCACCAAAGAGTACAATCTAGTCCAATAAACTTGAAGAAAGTTCTGAACCTGTCCGAGACGTCCGGCGAGGACGGGCCGCTCGACCTGTCGATGGACGTGCTGGATCTCAGCAAGAAGTCGAGGAACAAGGACGAGAACAACTCTGCCGTGTCCCACGAGCAATACGGTAAAAGCCAGAAGGATCTGTACAACCACTTGTTCCTCACGGAGGCATTCCTGAAGGCTGGCCACAGCAGCTCTCAGCCGACCTCGCTCGAAACTCTGTACGCCAACGCCATTTACAGAAACTTAAGCCAAACGTACCAGACCGGCGTCGGCGCTGGAATTCTGCCGCCGTACATGTTCAATCCCCACATATTCGGCCAGGACTTCGCTGTGAAGGACAGGTTGGAGAAAGACTTGGTCAGAGGTCTGCAACTGACCAGCGGTGGCACTTTGGTGGAGCCGTCGACCAGCAGCGCTGGCTTCAGCGCATACACACAGAACAGAGACATGAATCCTCAGTCAGCCGAGCAGAGCGAATACGCGAAGCTGATATCTTCCAAGATGGTGAACAAGGGAGTGACGAGCCGCGACAAGCCGGACAGCATGTCGTCGTCGAACTCGGTGAAAATGGTGATCAAGAACGGGGTGCTGATGCCTAAGCAGAAGCAACGAAGATACAGGACCGAGAGGCCTTTCTCTTGCGAGCATTGCTCGGCGAGGTTCACGCTGAGAAGCAACATGGAGAGACACATCAAGCAACAACATCCGCAACACTGGAGCCAAAGACCCAGGGGTGGCCACTCCACGAGAGGAAGACCTCCTGCCAGTCACCCCACGTTGCTGCAAAATCTTGGACAGCCGGCTCCTCAGGTTCCCCAATCGTACGCCAACATTCTGCCGAAGAGCGAAGAGTCGGCAGAATTCGCGAGGCACTCCATCTCCGACCAGGTGAAATACGCGATCCTGACGCAGAAGCTGAGGGCGAACAAGATCGAGGACAACGACTCCGAGGAAGAGTTGGTGATAGACGAAGGCCCGCAAGAGAAGGATTGTCAAGAGTCTCAGGATCAGAAGGAGAAAAGTCTGTTGAGGGGGCAGTTGGAAGGTGGAGAGTCCGCGAAAGAGACTCCGGCGAGGGATTCGTCGAGAACCGACTCGAACGAGGCTGACGGTAAAGAAGCGAACGTGAAAGTAGAGACGAAGGAGGAGAGCCCTGCCGAGGCAGATCACGACAGATCGGCCGACAAGAGTCCTAGCAAAGCGTACAGGACGAGACCGGTGGCGGTGAAgagcgagaaaaaggaagacgaaAACACTGACCTGGCTAGCGTTTCAGAGTTATTGGACAACGCGTGCCAACAGTATCCGGAGTTTCAGTCGCAATACCTGAGCGACGAGGAAGGCCTGGTGGCGTCCAACAGCGAGTGCCACAATTCAGGCAGCGACGAAAAGTCTGACTCGGTGAACTCAGTCAGCTCCGTGACCGCgccgtcgaaaaaaaaaaaaaaaaaaaagaaaaagaaatcggcaTACTCGATGGCGCCGAACAAAGTGATCTGCCCGTACTGTCAGCGCCCGTTTCCCTGGACGTCGTCTCTTAGGAGACACATTCTCACCCATACAGGACAAAAGCCCTACCAGTGCACTCATTGCTCGCTTCTGTTCACCACAAAGTCGAACTGCGACCGTCACCTGCTGAGGAAGCACAAGACAAACCCAAACAAAGTGCACAGAGCGAGAAACTCCTCTTCCCCGGACTCCCAACCGGTCGTCAATAGCAACAACTCGTTCTCCACGAGGAACGTACCGGAAAGACCGTACAAGTGCAATCAGTGTCCCAGCTCGACATTCTCGACGCTGGGCAACCTGAAGAAACATCGTTCTACGAAGCACGGTCGGAAGTTGAAGTCGCGATCGGACACACCGTCCAGCGAGCCACAGAACAGCCCGCCGGAGTGCCCGAAGCAGAACAACGAGCAAACCGACTACGACAGCCAATCATCGAGCGTATCCGAGGGCATAGAGCCTTCATCCGTGGCAACGCTTCCCAAGACCAACTCCAACACCTCGTCGACAAACGACACGGCCAGGTCGAGGAGATCCTCGCCGCGAACCTCGCCCGGACCTAGCGACGTGCCGTTCAAATGCCACCTGTGTGACTGTGGCTTCGCCGACCGCCAAGATTGCCTGGAACACATCAAGGTGAATCACAAAAGATCGTACGAGATGCTGGTGGCGAAAGGAGCGTTGGACATGGACATTGACGCGATGGAAGAGCAGCAACAGCCACCGCCGCAACACCAGACCAGCGACGGTGAAGAGAAACGAGGACGTTTCCCAGACTACAGCAACAGGAAGGTGGTCTGCGCTTTCTGCATGAGGCGGTTCTGGTCCGCGGAGGATCTCCGACGTCACATGAGGACGCACACCGGCGAACGGCCGTTCTCCTGCGACATTTGCTGCAGGAGATTCACTTTGAAGCACAGCATGCTGCGGCACAGGAAGAAGCACGAGTCCATCGACTCGACAATGTACGTCGGCACGAGCGGCGACGAGGAGAACTCGCCGTCGCAGCCGTCCGGCCAACAACAGCAAATGTTGCTAACGACGACGAACAACGGGAATCCCCACATTCAGGACAGGATCGCGACACACTTGCCGACCGCCGCTCCGATCGCAGCCAGCGACGCGGCTGCACCGAGCGGATTAATCAGATTCAATCCGTACGAGAAACTGACGACGCTCTCCGGGAAGCTGGCCAGCATCCCGCAGAATGTGAACCCGGACGCGGAGAGCACGGACAACGACTTGATTTCAAATCTACTGGGGATAGGAGACAAGAGTTTCATCGACAAGGTGCTGCAGGCATCGCCCGACGATGCTGCCAAATTGTTGGGAGTAAACCACAGCCACGAGTGA
Protein Sequence: MDYSTKVTVKSGSEQRSESEAQADAASSPSSVELPESAHSCPACSAVLPTSGDLTNHIHGHNSSRSTDCSGEDEYCCNMCNRMFSSSSSLNRHLSMHAGARPYKCKYCEMAFTTNGNMNRHLKTAHRGVSPHSCTDSEASTSGSNSSDSEKSKRRHLEEYNNNEITKRNSPDYVDRRDEEEMDQEEEEEELSLSLPAKRKYSGDNETHKRHKILLNSSRTEMKPRPDDGQNICTCPVCGRQDFGSSALLEAHLERNHPEFPAKCDSCNLSFKNHRVLNLHRFMIHFAEHPVGNTARNLRNSVVGFNDLTFVDFSSGKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRSALDAHETDCGITNSQSRTNDGQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPENVKFNPGASSSGSSGTYSSEYHEEEAQDAFAAEFRRMKLKGEFPCRLCSAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNENVERTSPRVTKDEVRKSLVFPTERGDHLHHQAQVHYPPPIRGEIRIIEEAKLHNAAMGAAHHGVMNHCDKSEAFTRLGQPMAMIQARGNDGKPGQDAKSDYSKLDDDLESRSSEGSVSLVTETKSEPHQRVQSSPINLKKVLNLSETSGEDGPLDLSMDVLDLSKKSRNKDENNSAVSHEQYGKSQKDLYNHLFLTEAFLKAGHSSSQPTSLETLYANAIYRNLSQTYQTGVGAGILPPYMFNPHIFGQDFAVKDRLEKDLVRGLQLTSGGTLVEPSTSSAGFSAYTQNRDMNPQSAEQSEYAKLISSKMVNKGVTSRDKPDSMSSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPASHPTLLQNLGQPAPQVPQSYANILPKSEESAEFARHSISDQVKYAILTQKLRANKIEDNDSEEELVIDEGPQEKDCQESQDQKEKSLLRGQLEGGESAKETPARDSSRTDSNEADGKEANVKVETKEESPAEADHDRSADKSPSKAYRTRPVAVKSEKKEDENTDLASVSELLDNACQQYPEFQSQYLSDEEGLVASNSECHNSGSDEKSDSVNSVSSVTAPSKKKKKKKKKKSAYSMAPNKVICPYCQRPFPWTSSLRRHILTHTGQKPYQCTHCSLLFTTKSNCDRHLLRKHKTNPNKVHRARNSSSPDSQPVVNSNNSFSTRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHGRKLKSRSDTPSSEPQNSPPECPKQNNEQTDYDSQSSSVSEGIEPSSVATLPKTNSNTSSTNDTARSRRSSPRTSPGPSDVPFKCHLCDCGFADRQDCLEHIKVNHKRSYEMLVAKGALDMDIDAMEEQQQPPPQHQTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPSQPSGQQQQMLLTTTNNGNPHIQDRIATHLPTAAPIAASDAAAPSGLIRFNPYEKLTTLSGKLASIPQNVNPDAESTDNDLISNLLGIGDKSFIDKVLQASPDDAAKLLGVNHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01419172; iTF_01419818; iTF_01421102; iTF_01418535; iTF_01420463; iTF_00873982; iTF_00983755; iTF_01417907; iTF_00982486; iTF_00983157;
90% Identity: iTF_01419818;
80% Identity: -