Basic Information

Insect: Tetragonula davenporti
Gene Symbol: Rreb1
Assembly: GCA_010645165.1
Location: WIUW01010322.1:1935-7532[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.059 6.4 7.7 0.2 1 23 41 63 41 63 0.95

2 16 2.3e-06 0.00025 21.6 3.5 1 23 77 99 77 99 0.98

3 16 2.3e-06 0.00025 21.6 1.1 1 23 105 128 105 128 0.98

4 16 0.081 8.9 7.2 0.2 2 23 238 261 237 261 0.93

5 16 0.17 18 6.3 2.9 2 23 267 289 267 289 0.94

6 16 1.5 1.6e+02 3.3 0.6 1 19 345 363 345 365 0.89

7 16 0.16 18 6.3 0.1 1 23 477 499 477 499 0.96

8 16 2.3e-05 0.0025 18.4 0.3 1 23 508 530 508 530 0.98

9 16 0.00098 0.11 13.3 2.8 1 23 536 559 536 559 0.97

10 16 0.00052 0.057 14.1 2.8 1 23 938 961 938 961 0.96

11 16 0.00039 0.043 14.5 0.1 3 23 1236 1256 1234 1256 0.97

12 16 0.2 22 6.0 6.9 1 23 1262 1285 1262 1285 0.97

13 16 0.0033 0.36 11.6 2.2 1 23 1323 1347 1323 1347 0.97

14 16 2.4 2.6e+02 2.6 5.3 1 23 1430 1453 1430 1453 0.95

15 16 0.0089 0.98 10.3 0.4 2 23 1504 1525 1503 1525 0.94

16 16 1.1 1.2e+02 3.7 8.2 1 23 1531 1553 1531 1553 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.059	6.4	7.7	0.2	1	23	41	63	41	63	0.95
2	16	2.3e-06	0.00025	21.6	3.5	1	23	77	99	77	99	0.98
3	16	2.3e-06	0.00025	21.6	1.1	1	23	105	128	105	128	0.98
4	16	0.081	8.9	7.2	0.2	2	23	238	261	237	261	0.93
5	16	0.17	18	6.3	2.9	2	23	267	289	267	289	0.94
6	16	1.5	1.6e+02	3.3	0.6	1	19	345	363	345	365	0.89
7	16	0.16	18	6.3	0.1	1	23	477	499	477	499	0.96
8	16	2.3e-05	0.0025	18.4	0.3	1	23	508	530	508	530	0.98
9	16	0.00098	0.11	13.3	2.8	1	23	536	559	536	559	0.97
10	16	0.00052	0.057	14.1	2.8	1	23	938	961	938	961	0.96
11	16	0.00039	0.043	14.5	0.1	3	23	1236	1256	1234	1256	0.97
12	16	0.2	22	6.0	6.9	1	23	1262	1285	1262	1285	0.97
13	16	0.0033	0.36	11.6	2.2	1	23	1323	1347	1323	1347	0.97
14	16	2.4	2.6e+02	2.6	5.3	1	23	1430	1453	1430	1453	0.95
15	16	0.0089	0.98	10.3	0.4	2	23	1504	1525	1503	1525	0.94
16	16	1.1	1.2e+02	3.7	8.2	1	23	1531	1553	1531	1553	0.98

Sequence Information

Coding Sequence: ATGAAgcagatttttcttctttcagttACTGTCAAAAATGGCGCCGAGCAAAGATCTGAGAGCGAAGCACAAGCCGATGCTGCGTCGTCTCCATCCAGTGTTGAATTGCCAGAAAGCGCGCACTCGTGCCCGGCCTGTTCGGCCGTGTTGCCCACCTCCGGGGACTTGACGAACCACATACACGGCCACAACTCGTCCCGCAGCACCGACTGCAGCGGCGAGGATGAGTACTGCTGCAACATGTGCAACAGGGTGTTCAGCTCTTCCAGTTCTCTCAACAGGCACTTGTCGATGCACACAGGTGCCCGGCCGTACAAGTGCAAGTACTGTGAAATGGCGTTCACCACGAACGGGAACATGAACAGGCACCTGAAATCGGCTCATAGGGGCGCGTCGCCTCACAGCTGCACAGATTCGGAGGCTAGTACCAGCGGCAGTAACAGCAGCGACTCGGAGAAATCCAAGAGGCGACATCTCGAGGAGTACAACAACAACGAAATCACGAAAAGGAACTCGCCGGACTACGTCGAGGGGCAAGTGATGGCGGTTGatgtggaggaggaggaggaggaggagaccCCCTTGTCTTTACCCGCGAAGCGAAAGTGCACGTACTCGAGCGACAACGAGACGCAGAAGAGGCACAAGATCCTTCTGAACAGCTCGAGAACGGAAATGAAGCCGAGACCGGACGACAGTCAGAACATCTGCACTTGTCCGGTGTGCGGCAGACAGGACTTTGGCAGTAGCGCCCTCTTGGAAGCGCATTTGGAACGAAATCACCCGGAGTTCCCCGCGAAATGCGACAGTTGCAACCTGTCGTTCAAAAACCACCGGGTGTTGAATCTGCATCGGTTCATGATACACTTCGCGGAACACCCGGTGGGGAATACGACGAGGAACCTGCGAAACTCCGTGGTCGGTTTCAATGATTTGACGTTCGTCGACTTCTCGTCGGGCAAGTTCCCAGCGATAGCAAGAGCCGTCTGCGAGCAGTCTCTTCACCGGCCGGCCTCCGGCGAAGTTGCTAAGTTCCAATGCTCCAAGTGTCTGCGAGCGTTCCCTTGCAGATCGGCGTTGGACGCCCACGAGACCGACTGCGGCACCACAAACTCTCGGAGCAGAACGAACGACGGCCAGTCGAGGAGGGACGACTTCTTCGCCGGTCTGGACCTGCAGAACAAGGCCGCTCTGACGGAGgcgaaagaagggaaagacCTAGCCGACATACAGAGCATCATATCCGTCACTTCCGGCCCGATATTACAGAATTTCCCACGATCGGACGCGAGCACGCCCGAGAACGTCAAGTTCAATCCGGGCGCGAGTTCTTCTGGCTCGTCCGGCACGTACTCCTCGGAGTACCACGAGGAAGAGGCGCAGGATGCGTTCGCCGCGGAGTTCAGAAGGATGAAATTGAAGGGGGAGTTCCCTTGCAGGCTCTGTTCCGCGATATTCCCGAACCTGAGGGCTTTGAAGGGCCACAACAGAGCGCACATGGGCGTGGGGCCAGGTATGCCTTACCCGTGCAACATGTGCCCCTACACCAGCACCGACAAGGCAACGCTGGTAAGGCACCTGAGGTCACACAACGGCGACAGACCGTACGAATGCTCGCTTTGCAACTACGCGTTCACGACCAAGGCGAATTGCGAACGCCACGTGCGCAACCGCCACGGGAAATTGACCCGCGAGGATATCAAGAGCGTGCTCATATATCACCCGAACGAGGACTCGACGAACGAGAACGTGGGACGAACCTCGCCGAGAGTCGTGAAGGACGAAGTGAGGAAAAGCTTGGTTTTCTCAACCGAACGAAGCGAGCTTCATCACCAGGCGCAGGTGCACTATCCTCCCCCAGTCAGGGGAGAAATCAGGATAATAGAGGAAGCGAAGCTGCACAACGCTACGATCGGGGCACACCATGGTGCGAACCACTGCGACAAGAGCGAGGCATTCTCGAGGCTCGGCCCGCCCGTGGCCGAGATGATCCATCGCGGCGACGATGGAAAGCCCGGCCATGATGCAAAGTCGGATTACTCGACGAAGCTAGACGACGACCTAGAATCGAGATCGTCCGAAGGTAGCGTGTCTCTAGTCACCGAAACAAAGTCAGAACCGCACCAAAGAGTACAATCTAGTCcaatgaatttgaagaaaattctgaACATGTCTGAGACCTCCGGCGAGGACGGGCCGCTGGACCTGTCCATGGACGTGTTGGATCTCAGCAAGAAGTCGAGGAACAAAAACGAGAACGACTTCGCTGCGTCCCACGAGCAGCAATACGGTAAAAACCAGAAGGAACTGTACAACGCTGCCAGCCACTTGTTGCTGACGGAGGCCTTCTTGAAGGCTGGCCACAGCAGCTCTCAACCGACCTCGCTCGAAGCTCTGTACGCCAACGCCATTTACAGAAACTTCGGCACGTATCCAGCCGGCGTTGGCGCTGGCATTTTGCCGCCGTACATGTTCAACCCTCACATATTCGGCCAGGACTTTGCCATGAAGGACAGGTTGGAGAAAGACTTGGTCAGAGGTCTGCAATTGACCAGCGGAGGCACTTTGGTGGAACCGTCGACCAGCAGCGCAGGATTCAGCGCATACTCCCAAAACAGAGACATGAATCCTCAGTCAGCCGACGCTCAGAGCGAGTACGCGAAGCTGATATCTTCCAAGATGGTAACGAGTAAGGGCGTAACGAGTCGCGACAAGCCGGACATGTCGTCGTCCAACTCGGTGAAAATGGTGATCAAGAACGGGGTGCTGATGCCTAAGCAGAAGCAACGAAGGTACAGGACCGAGAGGCCTTTCTCGTGCGAGCATTGCTCGGCGAGGTTCACGTTGAGGAGCAACATGGAGAGACACATCAAACAGCAGCACCCTCAACATTGGAGCCAAAGACCCAGGGGCGGTCACTCCACGAGAGGAAGACCTCCTACCAATCACCCTACGTTGCTGCAGAACCTTGGACAGTCGACTCCTCAGGTTCCCCAATCGTACGCCAACATTTTGCCCAAAAGCGAAGAGTCGGCAGAATTAACGAGACATTCCATTTCCGACCAGGTAAAATACGCGATCCTGACGCAAAAGCTCAGGGCGAACAAGATCGAGGACAACGATTCCGAGGAAGAGTTAGTGATAGACGAAGGCCCCCAAGAGAAAGAGTATCAAGAATCTCAGGAACAGAAGGAGAAGAGCTTGTTGAGGGGGCAGTTGGAGGGAGGAGAATCCGCGAAGGACGCTGCGGCGAAGGAGTCGTCGAGAACCGACTCGAACGAGACTGAGCCCAAGAAGGAACCGGACACGAAGGAAGAGACGATGAAGGTGGAGGGCCCTGCTGAACCCGACGAAAGATCAGCTGACAAGAATCCTGGCAAAGCGTGCAAAACGAGTCCGGTCGAGGTGAAGAGCGAAAAAACGGAAGACGAAAACACTGACCTGGCTAGCGTCTCGGAATTATTGGACAACGCGTGCCAGCAGTATCCGGAGTTTCAGCCGCAATATTTGAGCGACGAGGAAGGTCTAGTGGCGTCGAACAGCGAATGCCACAATTCGGGCAGCGACGAGAAGTCCGACTCGGTGAACTCGGTGAACTCGGTGAACTCGGCGAACTCGGCGAACTCGACGACCGCctcgtcgaagaaaaaaaaaaaaaaaaagaaaaagaaatccgcGTATTCGATGGCGCCGAACAAAGTGATCTGCCCGTACTGTCAACGACCGTTTCCCTGGACGTCGTCCCTGAGGAGACACATTCTCACCCACACGGGACAAAAGCCCTACCAGTGCACTCATTGCTCGCTTCTGTTCACAACCAAGTCGAACTGCGACCGTCACCTCCTGAGGAAGCACAAGACAAACCCTAACACGGTTCACAGAGCGAGAAACTCCTCTTCTCCGGATTCCCAGCCGACGGTCAATAGCAACAACTCGTTCTCCACGAGGAACGTGCCGGAAAGACCTTACAAGTGCAATCAGTGTCCCAGCTCGACGTTCTCCACGTTGGGCAACCTGAAGAAACACCGTTCGACGAAGCACGCTCGGAAATTGAAGTCGCGGTCGGACACACCGTCCAGCGAACCTCAGAACAGTCCACCGGAATGTCCGAAGCAGAACAACGAGCAAACGGACTACGACAGCCAGTCTTCGAGCGTGTCCGAGGGTGTAGAGCCATCCTCCGTAACGGCGATCCCCAAGTCGAACTCCAACACCTCCTCGACCAACGACACAGCCAGGTCGAGAAGATCCTCGCCGCGAACGTCGCCCGGACCTAGCGACGTGCCGTTCAAATGCCACCTGTGCGACTGCGGCTTCGCGGAGCGCCAAGATTGCCTGGAACACATCAAGATGAATCACAAAAGGTCGTACGAGATGCTAGTGGCGAAAGGAGCGTTGGACATGGACATCGACGCGATGGAAGAGCAACAACAGCCACCGCCGCAACACCAGACCAGCGACGgggaagagaaacgaggaCGTTTCCCGGACTACAGCAACAGGAAGGTGGTCTGCGCTTTCTGCATGAGGCGGTTCTGGTCCGCGGAGGATCTCCGACGTCACATGAGGACGCACACCGGCGAACGGCCGTTCTCCTGCGACATTTGCTGCAGGAGATTCACCCTGAAGCACAGCATGCTGCGGCACAGGAAGAAGCACGAGTCCATTGACTCGACGATGTACGTCGGCACGAGTGGCGACGAGGAGAACTCACCGTCGCAACCATCCACCATGGTTGCAACGCACGGCCAGCAACAACAGATGCTGCTAACGACGAACAACGGAAATCCTCACATTCAGGATAGAATCGCGACTCACTTGCCGACCGTCGCACCAATCGCAGCCAGCGACGCGGCACCGAGCGGATTAATCAGGTTCAATCCATACGAGAAACTGACAACGCTATCCGGGAAACTGGCCAGTATCCCGCAAAATGTGAACTCGGAGGTGGAGAGCACGGACAACGACTTGATTTCAAACTTACTGGGCATAGGAGACAAGAGTTTCATCGACAAAGTACTGCAGGCATCGCCCGACGATGCTGCCAAATTGTTGGGAGTAAATCACAGCCACGAGTGA
Protein Sequence: MKQIFLLSVTVKNGAEQRSESEAQADAASSPSSVELPESAHSCPACSAVLPTSGDLTNHIHGHNSSRSTDCSGEDEYCCNMCNRVFSSSSSLNRHLSMHTGARPYKCKYCEMAFTTNGNMNRHLKSAHRGASPHSCTDSEASTSGSNSSDSEKSKRRHLEEYNNNEITKRNSPDYVEGQVMAVDVEEEEEEETPLSLPAKRKCTYSSDNETQKRHKILLNSSRTEMKPRPDDSQNICTCPVCGRQDFGSSALLEAHLERNHPEFPAKCDSCNLSFKNHRVLNLHRFMIHFAEHPVGNTTRNLRNSVVGFNDLTFVDFSSGKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRSALDAHETDCGTTNSRSRTNDGQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPENVKFNPGASSSGSSGTYSSEYHEEEAQDAFAAEFRRMKLKGEFPCRLCSAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNENVGRTSPRVVKDEVRKSLVFSTERSELHHQAQVHYPPPVRGEIRIIEEAKLHNATIGAHHGANHCDKSEAFSRLGPPVAEMIHRGDDGKPGHDAKSDYSTKLDDDLESRSSEGSVSLVTETKSEPHQRVQSSPMNLKKILNMSETSGEDGPLDLSMDVLDLSKKSRNKNENDFAASHEQQYGKNQKELYNAASHLLLTEAFLKAGHSSSQPTSLEALYANAIYRNFGTYPAGVGAGILPPYMFNPHIFGQDFAMKDRLEKDLVRGLQLTSGGTLVEPSTSSAGFSAYSQNRDMNPQSADAQSEYAKLISSKMVTSKGVTSRDKPDMSSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNHPTLLQNLGQSTPQVPQSYANILPKSEESAELTRHSISDQVKYAILTQKLRANKIEDNDSEEELVIDEGPQEKEYQESQEQKEKSLLRGQLEGGESAKDAAAKESSRTDSNETEPKKEPDTKEETMKVEGPAEPDERSADKNPGKACKTSPVEVKSEKTEDENTDLASVSELLDNACQQYPEFQPQYLSDEEGLVASNSECHNSGSDEKSDSVNSVNSVNSANSANSTTASSKKKKKKKKKKSAYSMAPNKVICPYCQRPFPWTSSLRRHILTHTGQKPYQCTHCSLLFTTKSNCDRHLLRKHKTNPNTVHRARNSSSPDSQPTVNSNNSFSTRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKLKSRSDTPSSEPQNSPPECPKQNNEQTDYDSQSSSVSEGVEPSSVTAIPKSNSNTSSTNDTARSRRSSPRTSPGPSDVPFKCHLCDCGFAERQDCLEHIKMNHKRSYEMLVAKGALDMDIDAMEEQQQPPPQHQTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPSQPSTMVATHGQQQQMLLTTNNGNPHIQDRIATHLPTVAPIAASDAAPSGLIRFNPYEKLTTLSGKLASIPQNVNSEVESTDNDLISNLLGIGDKSFIDKVLQASPDDAAKLLGVNHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00734122;
90% Identity: iTF_01418535; iTF_01421102; iTF_01420463; iTF_01419172; iTF_00734122; iTF_01417907; iTF_00983157; iTF_00982486; iTF_00873982;
80% Identity: -