Basic Information

Insect: Tetragonula hockingsi
Gene Symbol: RREB1
Assembly: GCA_010645185.1
Location: WIUV01010391.1:704-6461[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.062 12 7.7 0.2 1 23 40 62 40 62 0.95

2 16 2.4e-06 0.00044 21.6 3.5 1 23 76 98 76 98 0.98

3 16 2.4e-06 0.00045 21.6 1.1 1 23 104 127 104 127 0.98

4 16 0.085 16 7.2 0.2 2 23 237 260 236 260 0.93

5 16 0.17 33 6.3 2.9 2 23 266 288 266 288 0.94

6 16 1.6 2.9e+02 3.3 0.6 1 19 344 362 344 364 0.89

7 16 0.17 31 6.3 0.1 1 23 476 498 476 498 0.96

8 16 2.4e-05 0.0044 18.4 0.3 1 23 507 529 507 529 0.98

9 16 0.001 0.19 13.3 2.8 1 23 535 558 535 558 0.97

10 16 0.00055 0.1 14.1 2.8 1 23 937 960 937 960 0.96

11 16 0.00041 0.077 14.5 0.1 3 23 1232 1252 1230 1252 0.97

12 16 0.21 39 6.0 6.9 1 23 1258 1281 1258 1281 0.97

13 16 0.0035 0.65 11.6 2.2 1 23 1319 1343 1319 1343 0.97

14 16 2.5 4.7e+02 2.6 5.3 1 23 1426 1449 1426 1449 0.95

15 16 0.0094 1.8 10.3 0.4 2 23 1500 1521 1499 1521 0.94

16 16 1.1 2.1e+02 3.7 8.2 1 23 1527 1549 1527 1549 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.062	12	7.7	0.2	1	23	40	62	40	62	0.95
2	16	2.4e-06	0.00044	21.6	3.5	1	23	76	98	76	98	0.98
3	16	2.4e-06	0.00045	21.6	1.1	1	23	104	127	104	127	0.98
4	16	0.085	16	7.2	0.2	2	23	237	260	236	260	0.93
5	16	0.17	33	6.3	2.9	2	23	266	288	266	288	0.94
6	16	1.6	2.9e+02	3.3	0.6	1	19	344	362	344	364	0.89
7	16	0.17	31	6.3	0.1	1	23	476	498	476	498	0.96
8	16	2.4e-05	0.0044	18.4	0.3	1	23	507	529	507	529	0.98
9	16	0.001	0.19	13.3	2.8	1	23	535	558	535	558	0.97
10	16	0.00055	0.1	14.1	2.8	1	23	937	960	937	960	0.96
11	16	0.00041	0.077	14.5	0.1	3	23	1232	1252	1230	1252	0.97
12	16	0.21	39	6.0	6.9	1	23	1258	1281	1258	1281	0.97
13	16	0.0035	0.65	11.6	2.2	1	23	1319	1343	1319	1343	0.97
14	16	2.5	4.7e+02	2.6	5.3	1	23	1426	1449	1426	1449	0.95
15	16	0.0094	1.8	10.3	0.4	2	23	1500	1521	1499	1521	0.94
16	16	1.1	2.1e+02	3.7	8.2	1	23	1527	1549	1527	1549	0.98

Sequence Information

Coding Sequence: atgtatataCACTTGATACgcattACTGTCAAAAATGGCGCCGAGCAAAGATCCGAGAGCGAAGCACAAGCCGATGCTGCGTCGTCTCCATCCAGTGTTGAATTGCCAGAAAGCGCGCACTCGTGCCCGGCCTGTTCGGCCGTGTTGCCCACCTCCGGGGACTTGACGAACCACATACACGGCCACAACTCGTCCCGCAGCACCGACTGCAGCGGCGAGGATGAGTACTGCTGCAACATGTGCAACAGGGTGTTCAGCTCTTCCAGTTCTCTCAACAGGCACTTGTCGATGCACACAGGTGCCCGGCCTTACAAGTGCAAGTACTGTGAAATGGCGTTCACCACGAACGGGAACATGAACAGGCACCTGAAATCGGCTCATAGGGGCGCGTCGCCTCACAGCTGCACAGATTCGGAGGCTAGTACCAGCGGCAGTAACAGCAGCGACTCGGAGAAATCCAAGAGGCGACATCTCGAGGAGTACAACAACAACGAAATCACGAAAAGGAACTCGCCGGACTACGTCGAGGGGCAAGTGATGGCGGTTgatgaggaggaggaggaggaggaggagaccCCCTTGTCTTTACCCGCGAAGCGAAAGTGCACGTACTCGAGCGACAACGAGACGCAGAAGAGGCACAAGATCCTTCTGAACAGCTCGAGAACGGAAATGAAGCCGAGACCGGACGACAGTCAGAACATCTGCACTTGTCCGGTGTGCGGCAGACAGGACTTTGGCAGTAGCGCCCTCTTGGAAGCGCATTTGGAACGAAATCACCCGGAGTTCCCCGCGAAATGCGACAGTTGCAACCTGTCGTTCAAAAACCACCGGGTGTTGAATCTGCATCGGTTCATGATACACTTCGCGGAACACCCGGTGGGGAATACGACGAGGAACCTGCGAAACTCCGTGGTCGGTTTCAATGATTTGACGTTCGTCGACTTCTCGTCGGGCAAGTTCCCAGCGATAGCAAGAGCCGTCTGCGAGCAGTCTCTTCACCGGCCGGCCTCCGGCGAAGTTGCTAAGTTCCAATGCTCCAAGTGTCTGCGAGCGTTCCCTTGCAGATCGGCGTTGGACGCCCACGAGACCGACTGCGGCACCACAAACTCTCGGAGCAGAACGAACGACGGCCAGTCGAGGAGGGACGACTTCTTCGCCGGTCTGGACCTGCAGAACAAGGCCGCTCTGACGGAGgcgaaagaagggaaagacCTAGCCGACATACAGAGCATCATATCCGTCACTTCCGGCCCGATATTACAGAATTTCCCACGATCGGACGCGAGCACGCCCGAGAACGTCAAGTTCAATCCGGGCGCGAGTTCTTCTGGCTCGTCCGGCACGTACTCCTCGGAGTACCACGAGGAAGAGGCGCAGGATGCGTTCGCCGCGGAGTTCAGAAGGATGAAATTGAAGGGGGAGTTCCCTTGCAGGCTCTGTTCCGCGATATTCCCGAACCTGAGGGCTTTGAAGGGCCACAACAGAGCGCACATGGGCGTGGGGCCAGGCATGCCTTACCCGTGCAACATGTGCCCCTACACCAGCACCGACAAGGCAACGCTGGTAAGGCACCTGAGGTCACACAACGGCGACAGACCGTACGAATGCTCGCTTTGCAACTACGCGTTCACGACCAAGGCGAATTGCGAACGCCACGTGCGCAACCGCCACGGGAAATTGACCCGCGAGGATATCAAGAGCGTGCTCATATACCACCCGAACGAGGACTCGACGAACGAGAACGTGGGACGAACCTCGCCGAGAGTCGTGAAGGACGAAGTGAGGAAAAGCTTGGTTTTCTCAACCGAACGAAGCGAGCTTCATCACCAGGCGCAGGTGCACTATCCTCCCCCAGTCAGGGGAGAAATCAGGATAATAGAGGAAGCGAAACTGCACAACGCTACGATCGGGGCACACCATGGTGCGAACCACTGCGACAAGAGCGAGGCATTCTCGAGGCTCGGCCCGCCCGTGGCCGAGATGATCCATCGCGGCGACGATGGAAAGCCCGGCCATGATGCAAAGTCGGACTACTCGACGAAGCTAGACGACGACCTAGAATCGAGATCGTCCGAAGGTAGCGTGTCTCTAGTCACCGAAACAAAGTCAGAACCGCACCAAAGAGTACAATCTAGTCcaatgaatttgaagaaaattctgaACATGTCTGAGACCTCCGGCGAGGACGGGCCGCTGGACCTGTCCATGGACGTGTTGGATCTCAGCAAGAAGTCGAGGAACAAAAACGAGAACGACTTCGCTGCGTCCCACGAGCAGCAATACGGTAAAAACCAGAAGGAACTGTACAACGCTGCCAGCCACTTGTTGCTGACGGAGGCCTTCTTGAAGGCTGGCCACAGCAGCTCTCAACCGACCTCGCTCGAAGCTCTGTACGCCAACGCCATTTACAGAAACTTCGGCACGTATCCAGCCGGCGTTGGCGCTGGCATTTTGCCGCCGTACATGTTCAACCCTCACATATTCGGCCAGGACTTTGCCATGAAGGACAGGTTGGAGAAAGACTTGGTCAGAGGTCTGCAATTGACCAGCGGAGGCACTTTGGTGGAACCGTCGACCAGCAGCGCAGGATTCAGCGCATACTCCCAAAACAGAGACATGAATCCTCAGTCAGCCGACGCTCAGAGCGAGTACGCGAAGCTGATATCTTCCAAGATGGTAACGAGTAAGGGCGTAACGAGTCGCGACAAGCCGGACATGTCGTCGTCCAACTCGGTGAAAATGGTGATCAAGAACGGGGTGCTGATGCCTAAGCAGAAGCAACGAAGGTACAGGACCGAGAGGCCTTTCTCGTGCGAGCATTGCTCGGCGAGGTTCACGTTGAGGAGCAACATGGAGAGACACATCAAACAGCAGCACCCTCAACATTGGAGCCAAAGACCCAGGGGCGGTCACTCCACGAGAGGAAGACCTCCTACCAATCACCCTACGTTGCTGCAGAACCTTGGACAGTCGACTCCTCAGGTTCCCCAATCGTACGCCAACATTTTGCCCAAAAGCGAAGAGTCGGCAGAATTAACGAGACATTCCATTTCCGACCAGGTAAAATACGCGATCCTGACGCAAAAGCTCAGGGCGAACAAGATCGAGGACAACGATTCCGAGGAAGAGTTAGTGATAGACGAAGGCCCCCAAGAGAAAGAGTGTCAAGAATCTCAGGAACAGAAGGAGAAGAGCCTGTTGAGGGGGCAGTTGGAGGGAGGAGAATCCGCGAAGGACGCTGCGGCGAAGGAGTCGTCGAGAACCGATTCGAACGAGACTGAGCCCAAGAAGGAACCGGACACGAAGGAAGAGACGATGAACGTGGAGGGCCCTGCTGAACCCGACGAAAGATCAGCTGACAAGAATCCTGGCAAAGCGTGCAAAACGAGTCCGGTCGAGGTGAAGAGCGAAAAAACGGAAGACGAAAACACTGACCTGGCTAGCGTCTCGGAATTATTGGACAACGCGTGCCAGCAGTATCCGGAGTTTCAGCCGCAATATCTGAGCGACGAGGAAGGTCTAGTGGCGTCGAACAGCGAATGCCACAATTCGGGCAGCGACGAGAAGTCCGACTCGGTGAACTCGGTGAACTCGGCGAACTCGGCGAACTCGACGACCGCctcgtcgaagaaaaaaaaaaaaaaaaagaaaaagaaatccgcGTATTCGATGGCGCCGAACAAAGTGATCTGCCCGTACTGTCAACGACCGTTTCCCTGGACGTCGTCCCTGAGGAGACACATTCTCACCCACACGGGACAAAAGCCCTACCAGTGCACTCATTGCTCGCTTCTGTTCACAACCAAGTCGAACTGCGACCGTCACCTGCTGAGGAAGCACAAGACAAACCCTAACACGGTTCACAGAGCGAGAAACTCCTCTTCTCCGGATTCCCAGCCGACGGTCAATAGCAACAACTCGTTCTCCACGAGGAACGTGCCGGAAAGACCGTACAAGTGCAATCAGTGTCCCAGCTCGACGTTCTCCACGTTGGGCAACCTGAAGAAACACCGTTCGACGAAGCACGCTCGGAAATTGAAGTCGCGGTCGGACACACCGTCCAGCGAACCTCAGAACAGTCCGCCGGAATGTCCGAAGCAGAACAACGAGCAAACGGACTACGACAGCCAGTCTTCGAGCGTGTCCGAGGGTGTAGAGCCATCCTCCGTAACGGCGATCCCCAAGTCGAACTCCAACACCTCCTCGACCAACGACACAGCCAGGTCGAGAAGATCCTCGCCGCGAACGTCGCCCGGACCTAGCGACGTGCCGTTCAAATGCCACCTGTGCGACTGCGGCTTCGCGGAGCGCCAAGATTGCCTGGAACACATCAAGATGAATCACAAAAGGTCGTACGAGATGCTAGTGGCGAAAGGAGCGTTGGACATGGACATCGACGCGATGGAAGAGCAACAACAGCCACCGCCGCAACACCAGACCAGCGACGGGGAAGAGAAACGAGGACGTTTCCCGGACTACAGCAACAGGAAGGTGGTCTGCGCTTTCTGCATGAGGCGGTTCTGGTCCGCGGAGGATCTCCGACGTCACATGAGGACGCACACCGGCGAACGGCCGTTCTCCTGCGACATTTGCTGCAGGAGATTCACCCTGAAGCACAGCATGCTGCGGCACAGGAAGAAGCACGAGTCCATTGACTCGACGATGTACGTCGGCACGAGTGGCGACGAGGAGAACTCACCGTCGCAACCATCCACCATGGTTGCAACGCACGGCCAGCAACAACAGATGCTGCTAACGACGAACAACGGAAATCCTCACATTCAGGATAGAATCGCGACTCACTTGCCGACCGTCGCACCAATCGCAGCCAGCGACGCGGCACCGAGCGGATTAATCAGGTTCAATCCATACGAGAAACTGACAACGCTATCCGGGAAACTGGCCAGTATCCCGCAAAATGTGAACTCGGAGGTGGAGAGCACGGACAACGACTTGATTTCAAACTTACTGGGCATAGGAGACAAGAGTTTCATCGACAAAGTACTGCAGGCATCGCCCGACGATGCTGCCAAATTGTTGGGAGTAAATCACAGCCACGAGTGA
Protein Sequence: MYIHLIRITVKNGAEQRSESEAQADAASSPSSVELPESAHSCPACSAVLPTSGDLTNHIHGHNSSRSTDCSGEDEYCCNMCNRVFSSSSSLNRHLSMHTGARPYKCKYCEMAFTTNGNMNRHLKSAHRGASPHSCTDSEASTSGSNSSDSEKSKRRHLEEYNNNEITKRNSPDYVEGQVMAVDEEEEEEEETPLSLPAKRKCTYSSDNETQKRHKILLNSSRTEMKPRPDDSQNICTCPVCGRQDFGSSALLEAHLERNHPEFPAKCDSCNLSFKNHRVLNLHRFMIHFAEHPVGNTTRNLRNSVVGFNDLTFVDFSSGKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRSALDAHETDCGTTNSRSRTNDGQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPENVKFNPGASSSGSSGTYSSEYHEEEAQDAFAAEFRRMKLKGEFPCRLCSAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNENVGRTSPRVVKDEVRKSLVFSTERSELHHQAQVHYPPPVRGEIRIIEEAKLHNATIGAHHGANHCDKSEAFSRLGPPVAEMIHRGDDGKPGHDAKSDYSTKLDDDLESRSSEGSVSLVTETKSEPHQRVQSSPMNLKKILNMSETSGEDGPLDLSMDVLDLSKKSRNKNENDFAASHEQQYGKNQKELYNAASHLLLTEAFLKAGHSSSQPTSLEALYANAIYRNFGTYPAGVGAGILPPYMFNPHIFGQDFAMKDRLEKDLVRGLQLTSGGTLVEPSTSSAGFSAYSQNRDMNPQSADAQSEYAKLISSKMVTSKGVTSRDKPDMSSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNHPTLLQNLGQSTPQVPQSYANILPKSEESAELTRHSISDQVKYAILTQKLRANKIEDNDSEEELVIDEGPQEKECQESQEQKEKSLLRGQLEGGESAKDAAAKESSRTDSNETEPKKEPDTKEETMNVEGPAEPDERSADKNPGKACKTSPVEVKSEKTEDENTDLASVSELLDNACQQYPEFQPQYLSDEEGLVASNSECHNSGSDEKSDSVNSVNSANSANSTTASSKKKKKKKKKKSAYSMAPNKVICPYCQRPFPWTSSLRRHILTHTGQKPYQCTHCSLLFTTKSNCDRHLLRKHKTNPNTVHRARNSSSPDSQPTVNSNNSFSTRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKLKSRSDTPSSEPQNSPPECPKQNNEQTDYDSQSSSVSEGVEPSSVTAIPKSNSNTSSTNDTARSRRSSPRTSPGPSDVPFKCHLCDCGFAERQDCLEHIKMNHKRSYEMLVAKGALDMDIDAMEEQQQPPPQHQTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPSQPSTMVATHGQQQQMLLTTNNGNPHIQDRIATHLPTVAPIAASDAAPSGLIRFNPYEKLTTLSGKLASIPQNVNSEVESTDNDLISNLLGIGDKSFIDKVLQASPDDAAKLLGVNHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00734122;
90% Identity: iTF_01419818;
80% Identity: -