Basic Information

Insect: Lepidotrigona ventralis
Gene Symbol: RREB1
Assembly: GCA_002806875.1
Location: NIPQ01092704.1:1439-12099[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.059 7.8 7.7 0.2 1 23 39 61 39 61 0.95

2 16 2.3e-06 0.0003 21.6 3.5 1 23 75 97 75 97 0.98

3 16 1.1e-06 0.00014 22.6 1.2 1 23 103 126 103 126 0.98

4 16 0.081 11 7.3 0.2 2 23 239 262 238 262 0.93

5 16 0.17 22 6.3 2.9 2 23 268 290 268 290 0.94

6 16 1.4 1.9e+02 3.4 0.6 1 19 346 364 346 366 0.89

7 16 0.16 21 6.3 0.1 1 23 478 500 478 500 0.96

8 16 2.3e-05 0.003 18.5 0.3 1 23 509 531 509 531 0.98

9 16 0.00099 0.13 13.3 2.8 1 23 537 560 537 560 0.97

10 16 0.00053 0.07 14.2 2.8 1 23 940 963 940 963 0.96

11 16 0.00039 0.052 14.6 0.1 3 23 1193 1213 1191 1213 0.97

12 16 0.2 26 6.1 6.9 1 23 1219 1242 1219 1242 0.97

13 16 0.0033 0.44 11.7 2.2 1 23 1280 1304 1280 1304 0.97

14 16 2.2 2.8e+02 2.8 4.8 1 23 1387 1410 1387 1410 0.94

15 16 0.009 1.2 10.3 0.4 2 23 1461 1482 1460 1482 0.94

16 16 1.1 1.4e+02 3.8 8.2 1 23 1488 1510 1488 1510 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.059	7.8	7.7	0.2	1	23	39	61	39	61	0.95
2	16	2.3e-06	0.0003	21.6	3.5	1	23	75	97	75	97	0.98
3	16	1.1e-06	0.00014	22.6	1.2	1	23	103	126	103	126	0.98
4	16	0.081	11	7.3	0.2	2	23	239	262	238	262	0.93
5	16	0.17	22	6.3	2.9	2	23	268	290	268	290	0.94
6	16	1.4	1.9e+02	3.4	0.6	1	19	346	364	346	366	0.89
7	16	0.16	21	6.3	0.1	1	23	478	500	478	500	0.96
8	16	2.3e-05	0.003	18.5	0.3	1	23	509	531	509	531	0.98
9	16	0.00099	0.13	13.3	2.8	1	23	537	560	537	560	0.97
10	16	0.00053	0.07	14.2	2.8	1	23	940	963	940	963	0.96
11	16	0.00039	0.052	14.6	0.1	3	23	1193	1213	1191	1213	0.97
12	16	0.2	26	6.1	6.9	1	23	1219	1242	1219	1242	0.97
13	16	0.0033	0.44	11.7	2.2	1	23	1280	1304	1280	1304	0.97
14	16	2.2	2.8e+02	2.8	4.8	1	23	1387	1410	1387	1410	0.94
15	16	0.009	1.2	10.3	0.4	2	23	1461	1482	1460	1482	0.94
16	16	1.1	1.4e+02	3.8	8.2	1	23	1488	1510	1488	1510	0.98

Sequence Information

Coding Sequence: ATGGATTACTCGACGAAAGttACTGTTAAAAGCGGCTCCGAGCAAAGATCTGAGAACGAAGCACAAGCCGATGCTGCGTCGTCTCCATCAAGTGTTGAATTGCCAGAAAGCGCGCACTCGTGCCCAGCCTGTTCGGCCGTGTTGCCCACCTCTGGGGACTTGACGAACCACATACATGGCCACAACTCGTCCCGCAGCACCGATTGCAGCGGCGAGGATGAGTACTGTTGCAACATGTGCAACAGGGTGTTCAGCTCTTCCAGTTCCCTCAACAGGCACTTGTCGATGCACACAGGTGCCCGGCCGTACAAGTGCAAGTACTGCGAAATGGCGTTCACCACGAACGGGAACATGAACAGGCACCTGAAAACGGCGCACAGGGGCGCGTCGCCTCACAGCTGCACAGATTCGGAGGCTAGTACCAGCGGCAGTAACAGCAGCGACTCGGAGAAATCCAAGAGGCGACATCTCGAGGAGTACAACAACAACGAGATCACGAAAAGGAACTCGCCGGACTACGTTGAGGGGCAAGTGATGGCGGTagcggaagaagaagaagaagaggaggaggaggaggaggggccCTTGTCTTTACCCGCGAAGCGAAAGTGTACGTACTCGAGCGACAACGAGACGCAGAAGAGGCACAAGATCCTTCTGAACAGCTCGAGGACGGAAATGAAGCCGAGACCGGATGACAGTCAGAACATCTGCACTTGCCCGGTGTGCGGCAGACAGGACTTTGGCAGTAGCGCCCTCTTGGAAGCGCATCTGGAACGAAACCATCCGGAGTTCCCCGCGAAATGCGACAGTTGCAACCTGTCGTTCAAAAACCACCGGGTGTTGAATCTGCATCGATTCATGATACACTTCGCGGAACACCCGGTAGGGAACACGACGAGGAACCTGCGAAACTCCGTGGTGGGTTTCAATGATTTGACGTTCGTCGACTTCTCGTCGGGCAAGTTCCCAGCGATAGCCAGAGCCGTCTGCGAGCAGTCGCTTCACCGGCCGGCTTCCGGCGAGGTGGCCAAATTCCAATGCTCCAAGTGTCTGCGAGCGTTCCCTTGTAGATCGGCGTTGGACGCCCACGAGAGTGACTGCGGCACCACGAACCCTCGGAGCAGAACGAACGACGGCCAGTCGAGAAGGGACGACTTCTTCGCCGGCCTGGACCTGCAGAACAAGGCCGCTCTGACGGAGGCCAAAGAAGGGAAAGACCTCGCCGACATACAGAGCATCATATCCGTCACTTCTGGCCcgatattgcaaaatttcccACGGTCAGACGCAAGCACGCCCGAGAACGTGAAGTTCAATCAGGGCGCGAGTTCTTCTGGCTCGTCCGGCACATACTCGTCGGAGTACCACGAGGAAGAGGCGCAGGATGCGTTCGCCGCGGAATTCAGAAGGATGAAATTGAAGGGGGAGTTCCCTTGCAGACTCTGTTCCGCGATATTCCCGAACCTGAGGGCTTTGAAGGGCCACAACAGAGCGCACATGGGCGTAGGACCAGGTATGCCTTACCCGTGCAACATGTGCCCTTACACCAGCACCGACAAGGCAACGTTGGTGAGGCACCTGAGGTCGCACAACGGCGACAGACCGTACGAATGCTCCCTTTGCAACTATGCATTCACGACCAAGGCGAATTGCGAACGCCACGTGCGCAACCGTCACGGGAAATTGACCCGCGAGGACATCAAGAGCGTCCTCATATACCACCCAAACGAGGACTCGACGAACGAGAACGTGGGACGAACCTCGCCGAGAGTCATGAAGGACGAAGTGAGGAAAAGCTTGGTTTTCTCAGCCGAACGAAGCGAGCTTCATCACCAAGCGCAGGTGCATTATCCTCCTCCAGTCAGGGGAGAAATCAGGATAATAGAAGAAGCGAAACTGCACAACGCTACGATCGGTGCACACCATAGTGCGAACCACTGCGACAAGAGCGAGGCATTCTCGAGGCTCTGCCCGCCTGTCGCCGAGATGGTCCATCGCGGCGACGAAGGAAAGTCCGGCCAGGATGCCAAGTCGGACTACTCCATGAAGCTAGATGACGACCTAGAATCGAGATCGTCCGAAGGTAGCGTGTCTCTAGTCACCGAAACGAAGTCAGAACCGCACCAAAGAGTACAATCTAGTCcaatgaatttgaagaaaattctgaACCTGTCTGAGACCTCCGGCGAGGACGGGCCGCTGGACCTGTCCATGGACGTGCTGGATCTCAGCAAGAAGTCGAGGAACAAGAACGAGAACGACGCTGCTGCGTCGCACGAACAGCAGTACGGTAAAAACCAGAAGGAACTGTACAACGCTGCCAGCCAGTTGTTCCTGACGGAGGCGTTCTTGAAGGCTGGCCACAGTAGCTCTCAGCCGACCTCCCTCGAAGCCCTGTACGCCAACGCCATTTACAGAAACTTCGGCACATATCCAACCGGCGTTGGCGCTGGCATTTTGCCGCCGTATATGTTCAATCCTCACATATTCGGCCAGGACTTCGCCATGAAGAACAGGTTGGAGAAAGACTTGGTCAGAGGTCTGCAACTGACCAGCGGAGGCACTTTGGTGGAACCGTCGACCAGCAGCGCAGGGTTCAGCGCATACTCCCAAAACAGAGACATGAATCCTCAGTCAGCTGACGCTCAGAGCGACTACGCGAAGCTGATATCTTCCAAAATGGTAACGAGTAAGGGCGTGACGAGTCGCGACAAGCCGGACAACATGTCGTCGTCCAACTCGGTGAAAATGGTGATCAAGAACGGGGTGCTGATGCCTAAGCAGAAGCAACGAAGGTACAGGACCGAGAGGCCTTTCTCTTGCGAGCATTGCTCGGCGAGGTTCACGTTGAGGAGCAACATGGAGAGACATATCAAACAGCAGCATCCTCAACATTGGAGCCAAAGACCGAGGGGCGGTCATTCAACGAGAGGAAGACCTCCTACCAATCACCCTACGTTGCTGCAGAACCTTGGACAGCCGGCACCTCAGGTTCCTCAATCATACGCGAACATTCTGCCAAAAAGCGAAGAACCGGCAGAATTAACAAGACACTCAATTTCAGACCAGGTAAAATACGCGATCCTGACGCAGAAGCTCAGGGCGAACAAGATCGAGGACAACGACTCCGAGGAAGAGTTAGTGATAGACGAAGGGCCACAAGAGAAGGAGTGTCAAGAATCTCAGGACCAGAAGGAGAAGAGCCTGTTGAGGGGGCAGTTGGAGGGAGGAGAATCCTCGAAGGACGCTGCGGCGAAGGAGTCGTCGAGGACCGACTCGAACGGGACTGAGCCCGAGAAAGAAGCGGACACGAAGAAAGAGACGATGAAGGTGGAGGGCCCTGCTGAACCCGGCGAAAGATCAGCTGACAATAATCCTGGCAAAGCGTACAAACCGGGGCCGGTCGAGGTGAAGAGCGAGAAAACGGAAGACGAGAACACCGACCTGGCTAGCGTCTCGGAATTATTGGACAACGCGTGCCAGCAGTATCCGGAGTTTCAGTCGCAATATCTGAGCGACGAGGAAGGGCTGaaaaagaaatccgCGTATTCGATGGCGCCGAACAAAGTGATCTGCCCGTACTGTCAACGACCGTTTCCCTGGACGTCGTCTCTGAGGAGACATATTCTCACCCACACGGGACAGAAGCCCTACCAATGCACACATTGCTCGCTTCTGTTCACGACCAAGTCGAACTGCGACCGTCACCTGCTGAGGAAGCACAAGACAAACCCTAACAAAGTTCACAGGGCGAGAAACTCCTCTTCTCCGGATTCCCAGCCGATGGTCAATAGCAACAACTCGTTCTCCACGAGGAACGTGCCGGAAAGACCATACAAGTGCAATCAGTGTCCCAGCTCGACGTTCTCGACGTTGGGCAACCTGAAGAAACACCGTTCGACCAAGCATGCTCGGAAATTGAAGTCGCGGTCGGACACACCGTCCAGCGAACCTCAGAACAGTCCTCCGGAATGTCCGAAGCAGAACAACGAGCAAACGGACTACGACAGCCAGTCTTCGAGCGTGTCCGAGGGCGTAGAGCCATCCTCCGTAACGGCGATTCCCAAGTCGAACTCCAACACGTCCTCGACCAACGACACGGCCAGGTCGAGAAGATCGTCGCCGCGAACGTCGCCCGGACCTAGCGACGTGCCGTTCAAATGCCACCTATGCGACTGCGGCTTCGCGGAGCGCCAAGATTGCCTGGAACACATTAAAGTGAATCACAAAAGGTCGTACGAGATGTTAGTGGCGAAAGGAGCGTTGGACATGGACATCGACGCGATGGAAGAGCAACAACAGCCACCGCCGCAACACCAGGCCAGCGACGGTGAAGAGAAACGAGGACGTTTCCCGGACTACAGCAACAGGAAGGTGGTCTGCGCTTTCTGCATGAGGCGGTTCTGGTCCGCGGAGGATCTCCGACGTCACATGAGGACGCACACCGGCGAACGGCCGTTCTCCTGCGACATTTGCTGTAGGAGATTCACACTGAAGCACAGCATGTTGCGACACAGGAAGAAGCACGAGTCCATTGACTCGACAATGTACGTCGGCACGAGTGGCGACGAGGAGAACTCACCGTCGCAACCATCCACCATGGTCGCAACGCATGGTCAGCAACAACAGATGCTGCTAACGACGAACAACGGAAATCCTCACATTCAGGATAGAATCGCGACTCACTTGCCGACCGCCGCTCCAATCGCAGCCAGCGACGCGGCACCGAGCGGATTAATCAGGTTCAATCCATACGAGAAATTGACGACGCTATCCGGGAAACTGGCCAGTATCCCGCAAAATGTGAACTCGGAGGTGGAGAGCACGGACAACGACTTGATTTCAAACTTACTGGGGATAGGAGACAAGAGTTTCATCGACAAAGTACTGCAGGCATCGCCCGACGATGCTGCCAAATTGTTGGGAGTAAATCACAGCCACGAGTGA
Protein Sequence: MDYSTKVTVKSGSEQRSENEAQADAASSPSSVELPESAHSCPACSAVLPTSGDLTNHIHGHNSSRSTDCSGEDEYCCNMCNRVFSSSSSLNRHLSMHTGARPYKCKYCEMAFTTNGNMNRHLKTAHRGASPHSCTDSEASTSGSNSSDSEKSKRRHLEEYNNNEITKRNSPDYVEGQVMAVAEEEEEEEEEEEGPLSLPAKRKCTYSSDNETQKRHKILLNSSRTEMKPRPDDSQNICTCPVCGRQDFGSSALLEAHLERNHPEFPAKCDSCNLSFKNHRVLNLHRFMIHFAEHPVGNTTRNLRNSVVGFNDLTFVDFSSGKFPAIARAVCEQSLHRPASGEVAKFQCSKCLRAFPCRSALDAHESDCGTTNPRSRTNDGQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPENVKFNQGASSSGSSGTYSSEYHEEEAQDAFAAEFRRMKLKGEFPCRLCSAIFPNLRALKGHNRAHMGVGPGMPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNENVGRTSPRVMKDEVRKSLVFSAERSELHHQAQVHYPPPVRGEIRIIEEAKLHNATIGAHHSANHCDKSEAFSRLCPPVAEMVHRGDEGKSGQDAKSDYSMKLDDDLESRSSEGSVSLVTETKSEPHQRVQSSPMNLKKILNLSETSGEDGPLDLSMDVLDLSKKSRNKNENDAAASHEQQYGKNQKELYNAASQLFLTEAFLKAGHSSSQPTSLEALYANAIYRNFGTYPTGVGAGILPPYMFNPHIFGQDFAMKNRLEKDLVRGLQLTSGGTLVEPSTSSAGFSAYSQNRDMNPQSADAQSDYAKLISSKMVTSKGVTSRDKPDNMSSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNHPTLLQNLGQPAPQVPQSYANILPKSEEPAELTRHSISDQVKYAILTQKLRANKIEDNDSEEELVIDEGPQEKECQESQDQKEKSLLRGQLEGGESSKDAAAKESSRTDSNGTEPEKEADTKKETMKVEGPAEPGERSADNNPGKAYKPGPVEVKSEKTEDENTDLASVSELLDNACQQYPEFQSQYLSDEEGLKKKSAYSMAPNKVICPYCQRPFPWTSSLRRHILTHTGQKPYQCTHCSLLFTTKSNCDRHLLRKHKTNPNKVHRARNSSSPDSQPMVNSNNSFSTRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARKLKSRSDTPSSEPQNSPPECPKQNNEQTDYDSQSSSVSEGVEPSSVTAIPKSNSNTSSTNDTARSRRSSPRTSPGPSDVPFKCHLCDCGFAERQDCLEHIKVNHKRSYEMLVAKGALDMDIDAMEEQQQPPPQHQASDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEENSPSQPSTMVATHGQQQQMLLTTNNGNPHIQDRIATHLPTAAPIAASDAAPSGLIRFNPYEKLTTLSGKLASIPQNVNSEVESTDNDLISNLLGIGDKSFIDKVLQASPDDAAKLLGVNHSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00734122;
90% Identity: iTF_01419818;
80% Identity: -