Basic Information

Insect: Eupithecia insigniata
Gene Symbol: -
Assembly: GCA_947859395.1
Location: OX402018.1:1346337-1351697[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0023 18 5.9 0.0 26 40 44 58 35 63 0.85

2 10 0.034 2.7e+02 2.2 0.0 23 52 233 262 226 264 0.87

3 10 0.18 1.4e+03 -0.1 0.1 22 44 260 282 256 290 0.82

4 10 0.0039 32 5.2 0.0 21 45 315 339 301 345 0.79

5 10 0.063 5e+02 1.3 0.2 21 43 427 449 422 454 0.87

6 10 0.0017 14 6.3 0.0 21 46 515 540 507 546 0.85

7 10 0.025 2e+02 2.6 0.0 21 46 543 568 539 574 0.84

8 10 0.0033 27 5.4 0.0 20 45 570 595 558 601 0.86

9 10 0.1 8e+02 0.7 0.2 22 44 600 622 595 630 0.70

10 10 0.05 4e+02 1.6 0.2 21 37 627 643 618 657 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0023	18	5.9	0.0	26	40	44	58	35	63	0.85
2	10	0.034	2.7e+02	2.2	0.0	23	52	233	262	226	264	0.87
3	10	0.18	1.4e+03	-0.1	0.1	22	44	260	282	256	290	0.82
4	10	0.0039	32	5.2	0.0	21	45	315	339	301	345	0.79
5	10	0.063	5e+02	1.3	0.2	21	43	427	449	422	454	0.87
6	10	0.0017	14	6.3	0.0	21	46	515	540	507	546	0.85
7	10	0.025	2e+02	2.6	0.0	21	46	543	568	539	574	0.84
8	10	0.0033	27	5.4	0.0	20	45	570	595	558	601	0.86
9	10	0.1	8e+02	0.7	0.2	22	44	600	622	595	630	0.70
10	10	0.05	4e+02	1.6	0.2	21	37	627	643	618	657	0.76

Sequence Information

Coding Sequence: ATGTCTGTTTGCAGAATGTGTTTACTTGACAATGTTACACTGAAACCTTTACTGAACTTACAATTACAAGAGTTTTTTGAATTGCTTTCAAACAACAAGTTGAACACAGAAGATCAACGACCTGAATCACTATGCTACATTTGCTATGCTCTGCTGAAGAAAAGCCACAAATTGATGGTGGTCTCCCGAAAGGCTGAGCAAATACTCACTAAACTGTACTGTAATGGCTTAACGGTCACTCCAGCAGCAGTAACATTACTAAATGGAGGCCATCCCCTCATCACCGCAGTGGCTACCATACAACCTGTTACAATTCACCAATATCCTGATGAAACTCAGGAAAACTGTCATATCAAACAGGAGCCAGATGATGATGACAGCAATGATGTTGAAGTGTTCCTTGAGGAAGTTAAAAATGATGATGATGAAGACACTGCAAATGTGATTAAAGATGAACAAACAGGAACCCATGAAGAAAACCAAATATTCATTGAACCTTACAATGTGAAACAGGAGACAACCACCCCGTCCATTAAGAACATCAAGACAAAAGCTCCTGTGAAACCTAAGGTTAAGAAAATAAATATTCACCATGGAGAAAAGTCGTATAAATGTAGTATTTGTGGAGAAACTTTCAGTCAAGTGCATTTCTTCAAATTACATAAACGGCAACACTTACGTAAAACTAGAGTACCTCACCCGCTGGCCTGCACATTCTGTGATAAAATCGTAGTGGATAACTATGAACtggaaaaacatctcttattgcatgaggggaagaaaccatattcctgcacaatatgcagcaagacttattccagcaaatatgtcctaaagcgacatcacaaaactcattcaggacaacgcccttatctttgcggcgcctgtggcaaatctttcgcagagaaaggcgaccttaaaaaacacatgagaatccattccggagaaaaaccattcacttgcaatatatgtctgaaacagtttactgaaaaatataaattaaaatcacacatgagcatccatgagggaaaggaatttgtttgtaaattgtgtgataaaccctttcctgaaaggcatcaattgaaacggcatgttagtagaatgcatgcaaataataagcgatacgcgtgtgaatattgtcataagaagttttttgaaaacacacaactgctgagtcatataaaaattcacacgggagatagaccttattcctgtgacgcatgtaaaaaaaccttcaacgacaaacgccggttaatcgtacatttcagatatcacactggtgaacggccgtatagctgcaaaatttgcgataaaagatttgtctccagcactatactaagaaatcacaatcaaacacacacggatgggaagcttttcgcttgtgatagttgtgagaagactttcaccgttctaggctatttaaaaagtcacttaaaaaaacatacagagagaagaaaagaaggatctgcttgcgcttgcgaccgttgtgggaaaacattttttgacggaagtgttttgaaaaaacatatgaaaatacatacaggagaaaggccttacgcctgtgatttgtgccataaggctttcattgagaagggtaacttaaaacgtcacatccgaacgcacacggaagagaaacctttccattgtgatttgtgtgacaagtcatttgctgatagtgggaatttgaagacccatagacgggttcacactggagaaaagccattttcttgcgatgcctgtggaaaaggcttcgcgcagtcgacgtctctgaagaaacatctaacaacgcacactggagaacgtcaattttcctgccccatatgcaacaaagctttctcagcaaagaacagcgtgaaaatacatatgagaatacacagtggggaaaagccatacacttgcaatgtttgcagtaaatctttctatgagagtagctcgctaaGCTTGCTAAGCAGGCATAAGAGAACACGTGGAGGAGAAACCCCGTACTTGTGTCTAATGTGTGACAAAACGTTTAGTAGGAAATCTTATTTGCAGCAGCAGCAGCAGCATGTTGCAATTTGTAACCGTTAG
Protein Sequence: MSVCRMCLLDNVTLKPLLNLQLQEFFELLSNNKLNTEDQRPESLCYICYALLKKSHKLMVVSRKAEQILTKLYCNGLTVTPAAVTLLNGGHPLITAVATIQPVTIHQYPDETQENCHIKQEPDDDDSNDVEVFLEEVKNDDDEDTANVIKDEQTGTHEENQIFIEPYNVKQETTTPSIKNIKTKAPVKPKVKKINIHHGEKSYKCSICGETFSQVHFFKLHKRQHLRKTRVPHPLACTFCDKIVVDNYELEKHLLLHEGKKPYSCTICSKTYSSKYVLKRHHKTHSGQRPYLCGACGKSFAEKGDLKKHMRIHSGEKPFTCNICLKQFTEKYKLKSHMSIHEGKEFVCKLCDKPFPERHQLKRHVSRMHANNKRYACEYCHKKFFENTQLLSHIKIHTGDRPYSCDACKKTFNDKRRLIVHFRYHTGERPYSCKICDKRFVSSTILRNHNQTHTDGKLFACDSCEKTFTVLGYLKSHLKKHTERRKEGSACACDRCGKTFFDGSVLKKHMKIHTGERPYACDLCHKAFIEKGNLKRHIRTHTEEKPFHCDLCDKSFADSGNLKTHRRVHTGEKPFSCDACGKGFAQSTSLKKHLTTHTGERQFSCPICNKAFSAKNSVKIHMRIHSGEKPYTCNVCSKSFYESSSLSLLSRHKRTRGGETPYLCLMCDKTFSRKSYLQQQQQHVAICNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00701633; iTF_00700315; iTF_00701279; iTF_00697571; iTF_00697572; iTF_00697928; iTF_00697929; iTF_00705648; iTF_00705281; iTF_00702197; iTF_00704245; iTF_00699433; iTF_00704607;
90% Identity: iTF_00700315;
80% Identity: iTF_00700315;