Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041624.1:9266925-9270721[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0011 9.4 7.4 0.1 25 40 43 58 33 62 0.81

2 9 0.15 1.3e+03 0.5 0.0 22 52 231 261 223 263 0.84

3 9 0.0047 40 5.3 0.0 21 45 314 338 297 343 0.80

4 9 0.051 4.3e+02 2.0 0.1 21 43 426 448 419 454 0.85

5 9 0.0014 12 7.1 0.1 21 46 514 539 506 546 0.85

6 9 0.056 4.8e+02 1.9 0.0 21 44 542 565 538 569 0.88

7 9 0.0041 35 5.5 0.0 20 45 569 594 559 605 0.86

8 9 0.27 2.3e+03 -0.3 0.2 22 33 599 610 594 624 0.71

9 9 0.0012 11 7.2 0.1 21 43 626 648 617 652 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0011	9.4	7.4	0.1	25	40	43	58	33	62	0.81
2	9	0.15	1.3e+03	0.5	0.0	22	52	231	261	223	263	0.84
3	9	0.0047	40	5.3	0.0	21	45	314	338	297	343	0.80
4	9	0.051	4.3e+02	2.0	0.1	21	43	426	448	419	454	0.85
5	9	0.0014	12	7.1	0.1	21	46	514	539	506	546	0.85
6	9	0.056	4.8e+02	1.9	0.0	21	44	542	565	538	569	0.88
7	9	0.0041	35	5.5	0.0	20	45	569	594	559	605	0.86
8	9	0.27	2.3e+03	-0.3	0.2	22	33	599	610	594	624	0.71
9	9	0.0012	11	7.2	0.1	21	43	626	648	617	652	0.88

Sequence Information

Coding Sequence: ATGTCTGTTTGCAGAATGTGTTTACTCGGAAATGTTACACTGAAACCCATTCATAATGCACAACTACGAGAATTGTTTGAATTGCTTTCAAACAACAAGTTGAAGACAGAAGATCCGAGACCAGAATCATTATGCTACATTTGCTATGCTCTGCTGAGGAGAAGCTATAAGTTGATGATTGTCTCCCGAAAGGCTGAACAGATACTTACACAACTCTACTGCAATGGCTTGACGGTGACTCCAGCAGCAGTTACATTACTAAACGGAGGTTTTCCTCTCATCACCGAAGCGGCTACCATACAACCCATTACAATACACCAATATCCTGATGATGCTGAGGATAATAGTCAGGTCAAATGGGAGCCAGATGATGATGCCGATGATGTTGAATGGTTCCTTGAGGAAGTTAAAAATGATTTTGATGAAGacCCTGCAACTACGATTAAAGATGAAAACAAAGAAACTCATGAAGAAAACCAAATATTCATTGAACCTTACAACGTGAAACAGGAGGCTAACAACccaccaaataaaaaaatcaagacaAAAGCCGCTGTGAAGACTAAactgaagaaaataaatattcaccATGGAGAAAAATCGTTTAAATGTAGTGTTTGTGGAGAAACTTTCAGCcaaatgtatctcttcaaatcACATAAACGGCAACATTTACGTAAAACAAGAGTTCGCCACCCACTGGCCTGCACTTTCTGTGATAAAATCGTTGTGGATAAGTATGAACTGGAAAAACATGTCTTATTGCATGAAGGAAAGAAACCGTATTCCTGTACATTATGCAGCAAGACGTATTCTAGCAAATATGTTTTAAAACGACATCACAAAACTCATTCAGGACAACGCCCTTATCTTTGCGGCGCGTGCGGAAAATCTTTCACAGAGAAAGGCGACCTTAAAAAACACATGAGAATCCACTCCGGAGAAAAACCTTTCACCTGCAAAATATGTCTGAAACAGTTCACAGaaaactataaattaaaatcacaTATGAGCATCCATGAGGGCAAGGAGTTCATATGCAAATTGTGTGATAAAACCTTCCCCGAGAGGCATCAATGGAAGCGGCATGTTAGTAGAATGCATGAAAACAATAAACGATATGCCTGTGAATATTGCGACAagaaattttatgaaaacaacCAACTGCAGATTCATATAAAGATTCACACCGGAGATAAACCTTATTCCTGTGACGCATGCAAAAAAACCTTTAACGACAAACGCCGTTTAATCGTACATTTCAGATATCACAGCGGCGAAAGGCCGTACAGCTGTAAAATCTGCGATAAAAAATTTGTCTCCAGCACTATCTTAAGAAATCACAATCTAACACACGCAGATGGTAAGCTTTTCGCTTGCGATAGTTGTGAAAAAACCTTTACCGTTCTAAGCTAtttaaaaagtcacttaaagaATCATACAGAGAGAAGAAAAGAAGGATCGGCGTGCGCTTGCGACCGATGCGGGAAGACCTTTTACGACGCGAGCGTTCTAAAAAAACACATGAAAATTCACACCGGAGAAAGACCTTACGCCTGTGATTTGTGCCATAAAACCTTCATTGAAAAGAGCAACTTAAAACGTCATATCCGAACTCACACGGAAGAGAAACCATTCCGTTGCGATTTATGTGACAAGTCATTTGCTGATAGCGGGAATTTGAAGACTCACAGACGGGTACACACAGGAGAAAAACCATTTTCTTGCGATGCCTGTGGAAAAGGCTTCGCGCAGTCGACGTCCTTAAAAAAACATCTGACAACGCACACTGGCGAGCGTCAATTTTCCTGTCCCATATGCGACAAAGCTTTCTCAGCTAAGAACAGCGTGAAAATACATATGAGAATCCACAGTGGAGAGAAACCGTACACTTGCAATATTTGTAGTAAATCGTTCTACGAGAGTAGCTCGCTGAGTAGGCATAAGAGAACGCATGGAGGAGAAACCCCATATATGTGTCTATTGTGTGACAAAACATTTAGTAGGAAATCTTATTTGCAACAACATATTGCGTTTTGTAAACGTTAG
Protein Sequence: MSVCRMCLLGNVTLKPIHNAQLRELFELLSNNKLKTEDPRPESLCYICYALLRRSYKLMIVSRKAEQILTQLYCNGLTVTPAAVTLLNGGFPLITEAATIQPITIHQYPDDAEDNSQVKWEPDDDADDVEWFLEEVKNDFDEDPATTIKDENKETHEENQIFIEPYNVKQEANNPPNKKIKTKAAVKTKLKKINIHHGEKSFKCSVCGETFSQMYLFKSHKRQHLRKTRVRHPLACTFCDKIVVDKYELEKHVLLHEGKKPYSCTLCSKTYSSKYVLKRHHKTHSGQRPYLCGACGKSFTEKGDLKKHMRIHSGEKPFTCKICLKQFTENYKLKSHMSIHEGKEFICKLCDKTFPERHQWKRHVSRMHENNKRYACEYCDKKFYENNQLQIHIKIHTGDKPYSCDACKKTFNDKRRLIVHFRYHSGERPYSCKICDKKFVSSTILRNHNLTHADGKLFACDSCEKTFTVLSYLKSHLKNHTERRKEGSACACDRCGKTFYDASVLKKHMKIHTGERPYACDLCHKTFIEKSNLKRHIRTHTEEKPFRCDLCDKSFADSGNLKTHRRVHTGEKPFSCDACGKGFAQSTSLKKHLTTHTGERQFSCPICDKAFSAKNSVKIHMRIHSGEKPYTCNICSKSFYESSSLSRHKRTHGGETPYMCLLCDKTFSRKSYLQQHIAFCKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00700663;
90% Identity: iTF_00704607;
80% Identity: iTF_00705281;