Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010001537.1:157250-170304[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.054 5.7e+02 1.5 0.0 19 52 181 214 175 216 0.85

2 9 0.29 3e+03 -0.8 0.0 22 44 212 234 203 242 0.83

3 9 0.003 31 5.6 0.0 21 45 267 291 253 296 0.80

4 9 0.031 3.3e+02 2.3 0.2 21 43 379 401 372 406 0.86

5 9 0.001 11 7.0 0.0 21 46 467 492 459 498 0.85

6 9 0.038 4e+02 2.0 0.0 21 43 495 517 491 521 0.88

7 9 0.0027 28 5.7 0.0 20 45 522 547 511 558 0.85

8 9 0.089 9.3e+02 0.8 0.2 22 45 552 575 548 583 0.70

9 9 0.019 1.9e+02 3.0 0.1 21 43 579 601 571 606 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.054	5.7e+02	1.5	0.0	19	52	181	214	175	216	0.85
2	9	0.29	3e+03	-0.8	0.0	22	44	212	234	203	242	0.83
3	9	0.003	31	5.6	0.0	21	45	267	291	253	296	0.80
4	9	0.031	3.3e+02	2.3	0.2	21	43	379	401	372	406	0.86
5	9	0.001	11	7.0	0.0	21	46	467	492	459	498	0.85
6	9	0.038	4e+02	2.0	0.0	21	43	495	517	491	521	0.88
7	9	0.0027	28	5.7	0.0	20	45	522	547	511	558	0.85
8	9	0.089	9.3e+02	0.8	0.2	22	45	552	575	548	583	0.70
9	9	0.019	1.9e+02	3.0	0.1	21	43	579	601	571	606	0.88

Sequence Information

Coding Sequence: ATGACTGTTTGTAGAATATGTTTACTTGAAAATGTCACACTGAGACCCATTCTGAACTCACAACTACAAGAGTTGTTTGAGTTGCTATCAAACAACAAGGTCACTCCAGCTGCAGTATCATTATTAAACGGTGGTCTTCCACTCTTCACCACATCGGCTACCATTCAACCTGTTACAATCCACCAATACCCTGATGATACTGAAGACTGTCAGGTGAAACGGGAGCCAGATGATGATAGCAATGATGTTGATGTGTTTCTTGAGGAAGTCAAAAATGATTTCGATAAAGACCTAACTGAGATTAAAGACGAACATACAAGAACCCATGAAGAAAACCAAATATTTATTGAACCTTACAATGTTAAACACGAGGAAACCAATCCACTAATTAAAAACATCAAGACAAAAGTCCCTGTGAAAACTAAATTGAAGAAAATTAATATTCACCATGGAGAAAAGTCATACAAATGCAGTATATGTGGAGAAACATTCAACCAAATGTATCTCTTCAAATTACACAAAAGGCAACATTTACGTAAATCCAGAGTACCTCACCCTTTGGCTTGCACATTCTGTGATAAAATAGTAGTGGATAAGTATGAGCTGGAAAAACATGTCTTATTGCATAAGGGAAAGAAGCCATATTCCTGCACAGTATGCAGCAAGACATATTCTAGCAAATACGTCCTAAAACGACATTACAAAACTCATTCAGGACAAAGGCCTTACCTTTGCGGCGCCTGCGGGAAATCTTTCGCAGAGAAAGGCGACCTAAAAAAACACATGAGAATACACTCTGGAGAAAAGCCATTTACTTGCAATATATGTCTGAAACAGTTCACCGAAAACTATAAACTAAAATCACACATGAGCATCCATGAGGGAAAGGAATTTATATGCAAATTATGTGATAAACCCTTTCCTGAGAGGCATCAATTGAAACGGCATGTGAGTAGGATGCATGCAAACAATAAGCGATATGCATGCGAGTATTGTGATAAGACATTTTATGAGAACAACCAACTGCTAAGCCATTTAAAAATTCACACAGGACATAAACCTTATTCCTGTGACGCATGTAAAAAAACGTTCTACGACAAACGTCGATTAATCGTACATTTCAGATATCACAGCGGTGAAAGGCCGTATAGCTGTAAAATTTGCAATAAAAGATTTGTATCAAGCACAATACTAAGAAATCACAATCAAACACACACAGATGGGAAGCTCTATGCTTGTGATACTTGTGAGAAGACTTTCACTCTTCTACGTTATTTAAAAAGTCATCTAAGCAAACATACAGAGAGAAGAAAAGACGGCTCAGCGTGCGCTTGCGACCGTTGCGGGAAAACGTTTTTCGACTCGAGcgttttaaaaaaacacatgaAAATTCACACCGGAGAAAGGCCATTCGCCTGTGATTTGTGCCATAAAACTTTCATTGAGAAGAGTAACTTAAAACGCCATATTCGAACGCATACGGAAGAGAAACCTTTCGGCTGTGATCTGTGTGACAAGTCATTTGCTGATAGTGGGAATTTGAAGACTCACAGACGAGTTCACACAGGAGAAAAACCATTTTCTTGCGACGCGTGTGGTAAAGGCTTTGCACAGTCAACTTCATTGAAGAAACATTTAACAACACATACTGGAGAACGTCAGTTTTCCTGTCCCATATGCAACAAAGCTTTTTCAGCAAAGAACAGTGTGAAAATACATATGAGGATTCACAGCGGGGAAAAGCCATACAGTTGCAATGTTTGCAGTAAATCTTTTTATGAGAGTAGCTCGCTAAGCCGGCATAAGAGAACGCATGGCGGAGAAACTCCGTACATGTGTCTAATGTGTGACAAAACGTTTAGTAGGAAATCTTATTTGCAGCAGCATGTTGCGTTTTGTAAACGTTAG
Protein Sequence: MTVCRICLLENVTLRPILNSQLQELFELLSNNKVTPAAVSLLNGGLPLFTTSATIQPVTIHQYPDDTEDCQVKREPDDDSNDVDVFLEEVKNDFDKDLTEIKDEHTRTHEENQIFIEPYNVKHEETNPLIKNIKTKVPVKTKLKKINIHHGEKSYKCSICGETFNQMYLFKLHKRQHLRKSRVPHPLACTFCDKIVVDKYELEKHVLLHKGKKPYSCTVCSKTYSSKYVLKRHYKTHSGQRPYLCGACGKSFAEKGDLKKHMRIHSGEKPFTCNICLKQFTENYKLKSHMSIHEGKEFICKLCDKPFPERHQLKRHVSRMHANNKRYACEYCDKTFYENNQLLSHLKIHTGHKPYSCDACKKTFYDKRRLIVHFRYHSGERPYSCKICNKRFVSSTILRNHNQTHTDGKLYACDTCEKTFTLLRYLKSHLSKHTERRKDGSACACDRCGKTFFDSSVLKKHMKIHTGERPFACDLCHKTFIEKSNLKRHIRTHTEEKPFGCDLCDKSFADSGNLKTHRRVHTGEKPFSCDACGKGFAQSTSLKKHLTTHTGERQFSCPICNKAFSAKNSVKIHMRIHSGEKPYSCNVCSKSFYESSSLSRHKRTHGGETPYMCLMCDKTFSRKSYLQQHVAFCKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00700663;
90% Identity: iTF_00697571;
80% Identity: iTF_00697571;