Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041624.1:9266925-9270721[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.7e-05 0.0031 18.8 2.7 1 23 202 224 202 224 0.98

2 17 0.0013 0.11 13.9 0.1 3 23 236 256 234 256 0.95

3 17 0.00016 0.014 16.7 5.9 1 23 262 284 262 284 0.99

4 17 1e-06 8.9e-05 23.6 0.3 1 23 290 312 290 312 0.94

5 17 7.7e-05 0.0065 17.7 2.2 1 23 318 340 318 340 0.98

6 17 0.00025 0.021 16.1 2.3 1 23 345 368 345 368 0.95

7 17 5.7e-06 0.00048 21.3 0.6 1 23 374 396 374 396 0.98

8 17 0.0014 0.12 13.8 2.1 1 23 402 424 402 424 0.98

9 17 0.00044 0.037 15.4 1.3 1 23 430 452 430 452 0.97

10 17 9.5e-05 0.0081 17.5 1.1 1 23 458 480 458 480 0.97

11 17 5.9e-06 0.0005 21.3 1.6 2 23 491 512 490 512 0.96

12 17 1.3e-07 1.1e-05 26.5 2.7 1 23 518 540 518 540 0.98

13 17 9.8e-08 8.4e-06 26.8 0.7 1 23 546 568 546 568 0.98

14 17 7.9e-06 0.00068 20.8 0.6 1 23 574 596 574 596 0.98

15 17 2.4e-06 0.0002 22.5 0.2 1 23 602 624 602 624 0.98

16 17 1.9e-06 0.00016 22.8 2.9 1 23 630 652 630 652 0.99

17 17 4.4e-06 0.00037 21.7 0.6 1 20 658 677 658 679 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.7e-05	0.0031	18.8	2.7	1	23	202	224	202	224	0.98
2	17	0.0013	0.11	13.9	0.1	3	23	236	256	234	256	0.95
3	17	0.00016	0.014	16.7	5.9	1	23	262	284	262	284	0.99
4	17	1e-06	8.9e-05	23.6	0.3	1	23	290	312	290	312	0.94
5	17	7.7e-05	0.0065	17.7	2.2	1	23	318	340	318	340	0.98
6	17	0.00025	0.021	16.1	2.3	1	23	345	368	345	368	0.95
7	17	5.7e-06	0.00048	21.3	0.6	1	23	374	396	374	396	0.98
8	17	0.0014	0.12	13.8	2.1	1	23	402	424	402	424	0.98
9	17	0.00044	0.037	15.4	1.3	1	23	430	452	430	452	0.97
10	17	9.5e-05	0.0081	17.5	1.1	1	23	458	480	458	480	0.97
11	17	5.9e-06	0.0005	21.3	1.6	2	23	491	512	490	512	0.96
12	17	1.3e-07	1.1e-05	26.5	2.7	1	23	518	540	518	540	0.98
13	17	9.8e-08	8.4e-06	26.8	0.7	1	23	546	568	546	568	0.98
14	17	7.9e-06	0.00068	20.8	0.6	1	23	574	596	574	596	0.98
15	17	2.4e-06	0.0002	22.5	0.2	1	23	602	624	602	624	0.98
16	17	1.9e-06	0.00016	22.8	2.9	1	23	630	652	630	652	0.99
17	17	4.4e-06	0.00037	21.7	0.6	1	20	658	677	658	679	0.95

Sequence Information

Coding Sequence: ATGTCTGTTTGCAGAATGTGTTTACTCGGAAATGTTACACTGAAACCCATTCATAATGCACAACTACGAGAATTGTTTGAATTGCTTTCAAACAACAAGTTGAAGACAGAAGATCCGAGACCAGAATCATTATGCTACATTTGCTATGCTCTGCTGAGGAGAAGCTATAAGTTGATGATTGTCTCCCGAAAGGCTGAACAGATACTTACACAACTCTACTGCAATGGCTTGACGGTGACTCCAGCAGCAGTTACATTACTAAACGGAGGTTTTCCTCTCATCACCGAAGCGGCTACCATACAACCCATTACAATACACCAATATCCTGATGATGCTGAGGATAATAGTCAGGTCAAATGGGAGCCAGATGATGATGCCGATGATGTTGAATGGTTCCTTGAGGAAGTTAAAAATGATTTTGATGAAGacCCTGCAACTACGATTAAAGATGAAAACAAAGAAACTCATGAAGAAAACCAAATATTCATTGAACCTTACAACGTGAAACAGGAGGCTAACAACccaccaaataaaaaaatcaagacaAAAGCCGCTGTGAAGACTAAactgaagaaaataaatattcaccATGGAGAAAAATCGTTTAAATGTAGTGTTTGTGGAGAAACTTTCAGCcaaatgtatctcttcaaatcACATAAACGGCAACATTTACGTAAAACAAGAGTTCGCCACCCACTGGCCTGCACTTTCTGTGATAAAATCGTTGTGGATAAGTATGAACTGGAAAAACATGTCTTATTGCATGAAGGAAAGAAACCGTATTCCTGTACATTATGCAGCAAGACGTATTCTAGCAAATATGTTTTAAAACGACATCACAAAACTCATTCAGGACAACGCCCTTATCTTTGCGGCGCGTGCGGAAAATCTTTCACAGAGAAAGGCGACCTTAAAAAACACATGAGAATCCACTCCGGAGAAAAACCTTTCACCTGCAAAATATGTCTGAAACAGTTCACAGaaaactataaattaaaatcacaTATGAGCATCCATGAGGGCAAGGAGTTCATATGCAAATTGTGTGATAAAACCTTCCCCGAGAGGCATCAATGGAAGCGGCATGTTAGTAGAATGCATGAAAACAATAAACGATATGCCTGTGAATATTGCGACAagaaattttatgaaaacaacCAACTGCAGATTCATATAAAGATTCACACCGGAGATAAACCTTATTCCTGTGACGCATGCAAAAAAACCTTTAACGACAAACGCCGTTTAATCGTACATTTCAGATATCACAGCGGCGAAAGGCCGTACAGCTGTAAAATCTGCGATAAAAAATTTGTCTCCAGCACTATCTTAAGAAATCACAATCTAACACACGCAGATGGTAAGCTTTTCGCTTGCGATAGTTGTGAAAAAACCTTTACCGTTCTAAGCTAtttaaaaagtcacttaaagaATCATACAGAGAGAAGAAAAGAAGGATCGGCGTGCGCTTGCGACCGATGCGGGAAGACCTTTTACGACGCGAGCGTTCTAAAAAAACACATGAAAATTCACACCGGAGAAAGACCTTACGCCTGTGATTTGTGCCATAAAACCTTCATTGAAAAGAGCAACTTAAAACGTCATATCCGAACTCACACGGAAGAGAAACCATTCCGTTGCGATTTATGTGACAAGTCATTTGCTGATAGCGGGAATTTGAAGACTCACAGACGGGTACACACAGGAGAAAAACCATTTTCTTGCGATGCCTGTGGAAAAGGCTTCGCGCAGTCGACGTCCTTAAAAAAACATCTGACAACGCACACTGGCGAGCGTCAATTTTCCTGTCCCATATGCGACAAAGCTTTCTCAGCTAAGAACAGCGTGAAAATACATATGAGAATCCACAGTGGAGAGAAACCGTACACTTGCAATATTTGTAGTAAATCGTTCTACGAGAGTAGCTCGCTGAGTAGGCATAAGAGAACGCATGGAGGAGAAACCCCATATATGTGTCTATTGTGTGACAAAACATTTAGTAGGAAATCTTATTTGCAACAACATATTGCGTTTTGTAAACGTTAG
Protein Sequence: MSVCRMCLLGNVTLKPIHNAQLRELFELLSNNKLKTEDPRPESLCYICYALLRRSYKLMIVSRKAEQILTQLYCNGLTVTPAAVTLLNGGFPLITEAATIQPITIHQYPDDAEDNSQVKWEPDDDADDVEWFLEEVKNDFDEDPATTIKDENKETHEENQIFIEPYNVKQEANNPPNKKIKTKAAVKTKLKKINIHHGEKSFKCSVCGETFSQMYLFKSHKRQHLRKTRVRHPLACTFCDKIVVDKYELEKHVLLHEGKKPYSCTLCSKTYSSKYVLKRHHKTHSGQRPYLCGACGKSFTEKGDLKKHMRIHSGEKPFTCKICLKQFTENYKLKSHMSIHEGKEFICKLCDKTFPERHQWKRHVSRMHENNKRYACEYCDKKFYENNQLQIHIKIHTGDKPYSCDACKKTFNDKRRLIVHFRYHSGERPYSCKICDKKFVSSTILRNHNLTHADGKLFACDSCEKTFTVLSYLKSHLKNHTERRKEGSACACDRCGKTFYDASVLKKHMKIHTGERPYACDLCHKTFIEKSNLKRHIRTHTEEKPFRCDLCDKSFADSGNLKTHRRVHTGEKPFSCDACGKGFAQSTSLKKHLTTHTGERQFSCPICDKAFSAKNSVKIHMRIHSGEKPYTCNICSKSFYESSSLSRHKRTHGGETPYMCLLCDKTFSRKSYLQQHIAFCKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00700663;
90% Identity: iTF_00704607;
80% Identity: iTF_00705648;