Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010001537.1:157250-170304[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.2e-05 0.0033 18.5 2.3 1 23 155 177 155 177 0.98

2 17 0.0011 0.091 14.0 0.1 3 23 189 209 187 209 0.95

3 17 1.7e-05 0.0013 19.8 3.6 1 23 215 237 215 237 0.99

4 17 2.4e-06 0.00019 22.5 0.2 1 23 243 265 243 265 0.94

5 17 5.6e-05 0.0044 18.2 1.9 1 23 271 293 271 293 0.98

6 17 4.9e-05 0.0039 18.4 1.7 1 23 298 321 298 321 0.96

7 17 1.2e-05 0.00092 20.3 0.7 1 23 327 349 327 349 0.98

8 17 0.0027 0.21 12.9 2.4 1 23 355 377 355 377 0.98

9 17 0.00048 0.038 15.2 1.9 1 23 383 405 383 405 0.98

10 17 0.00034 0.026 15.7 1.6 1 23 411 433 411 433 0.97

11 17 1.3e-05 0.0011 20.1 2.6 2 23 444 465 443 465 0.96

12 17 1.7e-07 1.3e-05 26.1 2.9 1 23 471 493 471 493 0.97

13 17 1.2e-06 9.5e-05 23.4 0.4 3 23 501 521 499 521 0.98

14 17 7.3e-06 0.00057 21.0 0.6 1 23 527 549 527 549 0.98

15 17 3.3e-06 0.00026 22.0 0.2 1 23 555 577 555 577 0.98

16 17 4.3e-06 0.00034 21.7 2.7 1 23 583 605 583 605 0.99

17 17 5.7e-06 0.00045 21.3 0.4 1 20 611 630 611 631 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.2e-05	0.0033	18.5	2.3	1	23	155	177	155	177	0.98
2	17	0.0011	0.091	14.0	0.1	3	23	189	209	187	209	0.95
3	17	1.7e-05	0.0013	19.8	3.6	1	23	215	237	215	237	0.99
4	17	2.4e-06	0.00019	22.5	0.2	1	23	243	265	243	265	0.94
5	17	5.6e-05	0.0044	18.2	1.9	1	23	271	293	271	293	0.98
6	17	4.9e-05	0.0039	18.4	1.7	1	23	298	321	298	321	0.96
7	17	1.2e-05	0.00092	20.3	0.7	1	23	327	349	327	349	0.98
8	17	0.0027	0.21	12.9	2.4	1	23	355	377	355	377	0.98
9	17	0.00048	0.038	15.2	1.9	1	23	383	405	383	405	0.98
10	17	0.00034	0.026	15.7	1.6	1	23	411	433	411	433	0.97
11	17	1.3e-05	0.0011	20.1	2.6	2	23	444	465	443	465	0.96
12	17	1.7e-07	1.3e-05	26.1	2.9	1	23	471	493	471	493	0.97
13	17	1.2e-06	9.5e-05	23.4	0.4	3	23	501	521	499	521	0.98
14	17	7.3e-06	0.00057	21.0	0.6	1	23	527	549	527	549	0.98
15	17	3.3e-06	0.00026	22.0	0.2	1	23	555	577	555	577	0.98
16	17	4.3e-06	0.00034	21.7	2.7	1	23	583	605	583	605	0.99
17	17	5.7e-06	0.00045	21.3	0.4	1	20	611	630	611	631	0.95

Sequence Information

Coding Sequence: ATGACTGTTTGTAGAATATGTTTACTTGAAAATGTCACACTGAGACCCATTCTGAACTCACAACTACAAGAGTTGTTTGAGTTGCTATCAAACAACAAGGTCACTCCAGCTGCAGTATCATTATTAAACGGTGGTCTTCCACTCTTCACCACATCGGCTACCATTCAACCTGTTACAATCCACCAATACCCTGATGATACTGAAGACTGTCAGGTGAAACGGGAGCCAGATGATGATAGCAATGATGTTGATGTGTTTCTTGAGGAAGTCAAAAATGATTTCGATAAAGACCTAACTGAGATTAAAGACGAACATACAAGAACCCATGAAGAAAACCAAATATTTATTGAACCTTACAATGTTAAACACGAGGAAACCAATCCACTAATTAAAAACATCAAGACAAAAGTCCCTGTGAAAACTAAATTGAAGAAAATTAATATTCACCATGGAGAAAAGTCATACAAATGCAGTATATGTGGAGAAACATTCAACCAAATGTATCTCTTCAAATTACACAAAAGGCAACATTTACGTAAATCCAGAGTACCTCACCCTTTGGCTTGCACATTCTGTGATAAAATAGTAGTGGATAAGTATGAGCTGGAAAAACATGTCTTATTGCATAAGGGAAAGAAGCCATATTCCTGCACAGTATGCAGCAAGACATATTCTAGCAAATACGTCCTAAAACGACATTACAAAACTCATTCAGGACAAAGGCCTTACCTTTGCGGCGCCTGCGGGAAATCTTTCGCAGAGAAAGGCGACCTAAAAAAACACATGAGAATACACTCTGGAGAAAAGCCATTTACTTGCAATATATGTCTGAAACAGTTCACCGAAAACTATAAACTAAAATCACACATGAGCATCCATGAGGGAAAGGAATTTATATGCAAATTATGTGATAAACCCTTTCCTGAGAGGCATCAATTGAAACGGCATGTGAGTAGGATGCATGCAAACAATAAGCGATATGCATGCGAGTATTGTGATAAGACATTTTATGAGAACAACCAACTGCTAAGCCATTTAAAAATTCACACAGGACATAAACCTTATTCCTGTGACGCATGTAAAAAAACGTTCTACGACAAACGTCGATTAATCGTACATTTCAGATATCACAGCGGTGAAAGGCCGTATAGCTGTAAAATTTGCAATAAAAGATTTGTATCAAGCACAATACTAAGAAATCACAATCAAACACACACAGATGGGAAGCTCTATGCTTGTGATACTTGTGAGAAGACTTTCACTCTTCTACGTTATTTAAAAAGTCATCTAAGCAAACATACAGAGAGAAGAAAAGACGGCTCAGCGTGCGCTTGCGACCGTTGCGGGAAAACGTTTTTCGACTCGAGcgttttaaaaaaacacatgaAAATTCACACCGGAGAAAGGCCATTCGCCTGTGATTTGTGCCATAAAACTTTCATTGAGAAGAGTAACTTAAAACGCCATATTCGAACGCATACGGAAGAGAAACCTTTCGGCTGTGATCTGTGTGACAAGTCATTTGCTGATAGTGGGAATTTGAAGACTCACAGACGAGTTCACACAGGAGAAAAACCATTTTCTTGCGACGCGTGTGGTAAAGGCTTTGCACAGTCAACTTCATTGAAGAAACATTTAACAACACATACTGGAGAACGTCAGTTTTCCTGTCCCATATGCAACAAAGCTTTTTCAGCAAAGAACAGTGTGAAAATACATATGAGGATTCACAGCGGGGAAAAGCCATACAGTTGCAATGTTTGCAGTAAATCTTTTTATGAGAGTAGCTCGCTAAGCCGGCATAAGAGAACGCATGGCGGAGAAACTCCGTACATGTGTCTAATGTGTGACAAAACGTTTAGTAGGAAATCTTATTTGCAGCAGCATGTTGCGTTTTGTAAACGTTAG
Protein Sequence: MTVCRICLLENVTLRPILNSQLQELFELLSNNKVTPAAVSLLNGGLPLFTTSATIQPVTIHQYPDDTEDCQVKREPDDDSNDVDVFLEEVKNDFDKDLTEIKDEHTRTHEENQIFIEPYNVKHEETNPLIKNIKTKVPVKTKLKKINIHHGEKSYKCSICGETFNQMYLFKLHKRQHLRKSRVPHPLACTFCDKIVVDKYELEKHVLLHKGKKPYSCTVCSKTYSSKYVLKRHYKTHSGQRPYLCGACGKSFAEKGDLKKHMRIHSGEKPFTCNICLKQFTENYKLKSHMSIHEGKEFICKLCDKPFPERHQLKRHVSRMHANNKRYACEYCDKTFYENNQLLSHLKIHTGHKPYSCDACKKTFYDKRRLIVHFRYHSGERPYSCKICNKRFVSSTILRNHNQTHTDGKLYACDTCEKTFTLLRYLKSHLSKHTERRKDGSACACDRCGKTFFDSSVLKKHMKIHTGERPFACDLCHKTFIEKSNLKRHIRTHTEEKPFGCDLCDKSFADSGNLKTHRRVHTGEKPFSCDACGKGFAQSTSLKKHLTTHTGERQFSCPICNKAFSAKNSVKIHMRIHSGEKPYSCNVCSKSFYESSSLSRHKRTHGGETPYMCLMCDKTFSRKSYLQQHVAFCKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00700663;
90% Identity: iTF_00697572; iTF_00697928; iTF_00697929;
80% Identity: iTF_00697928;