Epri062778.1
Basic Information
- Insect
- Euceroptres primus
- Gene Symbol
- RREB1
- Assembly
- GCA_037177015.1
- Location
- JBAGKK010278570.1:1-8827[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.003 1 12.1 0.3 1 23 31 53 31 53 0.97 2 13 0.00043 0.15 14.8 0.2 1 23 67 89 67 89 0.97 3 13 0.013 4.6 10.1 0.5 1 23 171 194 171 195 0.94 4 13 0.0011 0.39 13.4 0.2 1 23 412 434 412 434 0.98 5 13 7.1e-06 0.0024 20.4 0.9 1 23 443 465 443 465 0.98 6 13 0.00028 0.095 15.4 1.4 1 23 471 494 471 494 0.97 7 13 0.00061 0.21 14.3 1.9 1 23 896 919 896 919 0.97 8 13 0.0044 1.5 11.6 0.3 3 23 1189 1209 1187 1209 0.97 9 13 0.5 1.7e+02 5.1 4.8 1 23 1215 1238 1215 1238 0.97 10 13 0.0076 2.6 10.8 1.5 1 23 1279 1303 1279 1303 0.97 11 13 1.3 4.6e+02 3.8 1.8 1 23 1385 1410 1385 1410 0.96 12 13 0.087 30 7.5 0.2 2 23 1456 1477 1455 1477 0.94 13 13 0.089 31 7.5 3.7 3 23 1485 1505 1483 1505 0.98
Sequence Information
- Coding Sequence
- AATCCGAAGATCGGACTGTATCAGACAAACAGCAGCGAGACTCAAACTAATATTGCATCATCGCTATTGATTGATCAATCAGACGTATTGCACTCTTGTCCAGCGTGTCCGAAAATCCTTCCAACACTTCGAGACTTAACGAACCATCTTCGTAATCACAATTCTCCTCGAAGTATCGACTGCAACGTCGACGAAGAATTTAGTTGCAAAGTATGTTACAAAGTACTAAGTTCCGCCAGTTCCTTAGATCGTCACGTTCTTGTACATTCCGCTCACAATCGACTGTCGCCTCACAGTTGTTCTGACTCTGAAGCTAGCAACGACTCAGAAACACCCACCAAAAAATTTGAGGAGTACAATAACAACGAAATCGCCAAAAGAAATTCGCCAGACATCATCGACAAAAGAGAGTCTCTTAACTTTATCAAAAAGAGGAAATCTCCGGACTACACTGAAGATCTTAGccttcagaaaaaattcaaacccAACTTGTCAGAGAGCCAAAACAAGTACAATTGTCCAATCTGTGGAAGACAAGATTTCGCCACCAGTGCTCTCCTCGAAGTTCACCTCGAACATCACCATGCCGATCTGGAGAAGTGTGAACCTGATAATTTGTCTTTTAAATACCACAGGGTTCTCAATCTTCATCGATCTGTAAACAACTTCAACGAAAATTCCCTCAGGAATGCTGCCAGGAACCTGAGACATTCAGTGGAGGGTTTTGGAGATTTGACCTTCGTCGACTTTACCTCGACGAAGTATCCAATGATCGCCAGGGCAAAGTGTGAGGAATTCCTCCACCGACCAGCATCTGGAGAAATGGCAAAATTCCAGTGTTCAAAATGTCTGAGAGCTTTTCCTTGCAAATCAGCTTCGGAATCCCACGAAATAGATTGTGGACTTCCAAATGCTCATTGGAAAGGAAGCGATGTTCAGTCGAGAAGGGATGATTTCTTTGCAGGGTTGAATCTTCAAAATAAGGCTTCCATGACGGAAGCTAAGGAGGGAAAGGACCTGGCTGATATTCAAAGCATCATCAGCATCACCTCTAGTCCGATTCTTCACAGCTTCTCCAGATCCGACGCCAGCACTCCTGACAATTGCAGTAACAAAATTAGCCAGAATGTTGGATCCTCTGGATCATCAGGAACTTTTTCGTCTGAGTATCATGAGGAGGAGACTCAAGATGCCTTTGCTGCTGAATTCAGGAAGATGAAACTCAAGGGCGAGTTTccttgtaaactttgcaatgcTGTCTTTCCTAACTTGAGAGCCCTGAAGGGTCACAATAGGACACACTTGGGAGTTGGACCTGGAATGCCTTATCCTTGTAATATCTGTCCTTACACGAGCACTGACAAGACGACTCTGACGAGGCATTTGAAAACGCACAATGGTGATAGACCTTTCGAGTGTGCTGAATGTGGATATGCTTTTACGACCAAGGCCAACTGCGAGAGGCACGTGAGAAATCGGCATGGGATTCATGATAAAAATGATGTTCAGAAGATGATTATTTATCATCCAACTGAGGACTCGACGAATGAGAGTCTTGATAGAAGTACATCGAAGGGAGTTAAGGATGAAGTTAGGAAGGCCCTTGTTTACCCCAAAGAGGATCTTCTTCATCACAATCATTATACTGTGATGGCTCTGCATTCAGATATCAAGATAAAGGAGGAGAGTAAGGATCAGAACAAGGAGATAAATCCGATAAGTCAGTTGAACCAGTTGAATCAACTAAACCAAATGACTCAGCTGAACCAAATAAACCAGCTTAATCAGATAAACCAAATAAACCAGATCAACCTACAGATGAACCACTATGATCAATCGGAAGTGTTCCCTAGGCCAAATTCGGTCCAACCTTTGGAGTTGACCCTCAGAACTTCCCCCCAGCATCTGGTCGTCAAGTCTGAAAATTCCAGGGTAGAGGAAGATCTCGAGTCGAGGTCGTCGGAGGGTAGCGTATCTCTAGTCAATGAAACCAAACCGGACGTACACCAAAGAATTCAAGCGAGTCCGATGAACTTGAAGAAACTCGCAAACGATTCCTCCAATGTGACCTCGAGCGACGATGGACCCTTGGATCTCTCTATGGATGTTCTCGACCTGAGCAAGAAACCTAAAGAAAAGCCTGAAGTGAAcggcaattttgaaaatcagaacGAAAACCAGAAGGACTTCTACAACACGGCGAATCCTCTTTTGTTGACACAAGCTCTCCTGAAGGCTCGTCAAGTTGGTTCGCCTCCAACATCCTTGGAAGCTTTGTACGCCAACGCTCATGCGAATATGATCTACAATAACTTGGCTCTGGGTTCAGGCGCAGGACTGATAGCTCCTTATTTCTACAATCCACTTTTCGATCAAGGATACGCCATGAAGGAAAGATTACAAAAGGAACTGGTGAGGGGTCTGCAAACCAGTGGAGGTACTTTAGTTGAACAGCCAGTTGAAAGTGCAGGATTTAATTCCAACTATCCTCCAACAAGACATCCTCAGCAGATGGAAGAGCAGATGAACTATTCGAATCTGATGCAGTCAAAAGTATCCAGCAAGGTAATTTCCCCTAGGGAGAGAATCAGCGAATCACCCTCTTCAAATTCGGTCAAGATGGTCATCAAGAATGGTGTCCTCATGCGAAAACAGAAGCAGAGAAGGTACAGGACTGAGAGGCCTTTCACCTGTGAATATTGCTCAGCAAAGTTCACCCTTAAAACTAATATGGAGAGGCACATCAAGCAGCAGCACAATGAGTTGTGGCACCGAAGACCCAGAGGTGGACACTCGACGAGAGGTAGACCTCCAGCGAGACCTCCCACCTTGATGCAGAATATAAGCCAGACTTCTCAATCCTTCTTGCGCACTAAATCACCCTACGACGTTCCATCGTTGCAGAAAGAAGACCAATCTGATTATGGAAAACACTCTATCTCTGATCAAGTCAAGTATGCAATCCTGGCTCAACAGCTAAAGGGGAACAAGACAGAGGAACAAGATACTGATGAGGAGTTGATCATCGATGAAGAACCTGGTGCAGAGTCTCGAGATCAGCCCAAGACAATGAGCTTATTAAGGGGGAAACTGGAAAGCACAGAAGTCAAGGAATATTGGAAAGAAGAAGCAGAGCAGATAAACTCTTCCGAACAACCTTTGGATCTCAAAAACGAGGGACCAGAACCTGACAAGGAGGCTCTAGCGTCTGAGGACGACAATATAGAAAGAAGACTTGTTTCCGAAAGCGAGGGGAATTCCAATGAAACTACTGAATTGGAAGCTCCAGCGAATGAGGGAACTGTGAAGAACGAAGATGGGGCCATGGACCTTGCCAGCGTTCCGAAACTGATTCACAACGCCTCTCAGAATTATCACCAGTTCAAGTCTCAGTATTTAAGCGACGAGGATGGTGTGGTTCATTCCATCAGCGATCACTCTGGAAATCATTCTGGCAGTGATGAAAAGTCCGAGAACTCTGCCAATTCGACAGCCtctaagaagaaaaagaaaaagaagaaaaagaaggctTCTGCCTATTCCATGGCGCCAAACAGAGTGATTTGTAAATACTGTCGCAGAGAATTCCCTTGGGTTTCATCTTTGAGAAGGCATATTCTTACCCACACTGGAGTAAAACCTTATAGGTGCGACTATTGCATGTTGGACTTTACGACTAAGTCTAACTGTGATCGCCACTTGAACAGGAAACACAAAAGCCTAATTCAACGTGCAAATGCCAGAAACGCCAGGAATTCTTCCTCGCCTGATGGTCAGGATATGAGGATGACCAATAATAATACTTTCTCAACGAGGAATGTTCCAGAGAGACCCTATAAGTGCAACCAATGTCCCAGTTCGACTTTCGCGACCTTGGGAAATCTGAAGAAACATAGGTCGACAAAGCATTCGAGAAAGACGAATTCTAGATCTGAGACCTCTTCCAGCGATCCTCAGAATTCTGATCATTGTCAGAAGCAGAATGATCAGAGTGGAGATGATGGTGGATCTTCGAGTTCGGAGAACATGGAGAACTCCTCTGCTATGGTGGAGGTTTCTAAGACGAATCAAAACACTTCTTCCTCGACGAATGAGAATCCAAGGTCGTGTAGGACCTCACCAACATCTTCGCCCGGACCAACCGACACACCTTTCAAGTGTCATATTCCTAATTGTGACAATGGGTTTGCTGATCGTCAGGACTGCCTGGATCATATCAAGATGAATCATCAGCGAGACTTTGAGATCTTGGTTTCCAAAGGTGCTTTGCAGATGGGGATCAATACTGCCGAGGAGCAACAACCTCCACCAACTCAGCACTCAAGCGATGGTCCCAGGTCCCTGGACTACAAAGATAGAAAGGTGGTCTGTGCATTCTGCATGCGACGATTCTGGTCAGCTGAAGATCTTCGACGTCACGTAAGAACTCACACAGGTGAAAAGCCCTTTTGGTGCGATGTCTGTGCCAGGAGATTTACTCTGAAACACAGCATGCTTCGTCACCGAAAGAAGCATTCCCCGTCACCGCGTCCTTACGCTGAAAGCGGTGACCGGTCACCTCTTCCCTATCCTGGAAGCGGTGACGAGGAAATTTCTCCAAATCAGCCTCCTACAATCACTCCCAGAAGTCAGCAGCATTCTCCAGCTCTGATTGCAGCGACCTCAGGCAGTTTAATGATCCAAGAAAGGATGTCCTTGCCAACAGTAGCCACTGTGGCTACCGGAGATGCTGCTCCAAGCAATCTGATGAGGTTCAATCCCTACGAGAAGCTAACTACCTTAACTGGAAAATTAACAAATGTCCAACAAAGCCATCCTGATGCTACCGAAACAGGAAATGATCTGATCTCCAATTTACTGGGAATAAAGGATCCTGGCATTGTTGATAAAATGCTTCTTGCTACCCCTGATGACGCCGCCAAACTTTTGGGTGTTAAGGGTAACAATGAGTAA
- Protein Sequence
- NPKIGLYQTNSSETQTNIASSLLIDQSDVLHSCPACPKILPTLRDLTNHLRNHNSPRSIDCNVDEEFSCKVCYKVLSSASSLDRHVLVHSAHNRLSPHSCSDSEASNDSETPTKKFEEYNNNEIAKRNSPDIIDKRESLNFIKKRKSPDYTEDLSLQKKFKPNLSESQNKYNCPICGRQDFATSALLEVHLEHHHADLEKCEPDNLSFKYHRVLNLHRSVNNFNENSLRNAARNLRHSVEGFGDLTFVDFTSTKYPMIARAKCEEFLHRPASGEMAKFQCSKCLRAFPCKSASESHEIDCGLPNAHWKGSDVQSRRDDFFAGLNLQNKASMTEAKEGKDLADIQSIISITSSPILHSFSRSDASTPDNCSNKISQNVGSSGSSGTFSSEYHEEETQDAFAAEFRKMKLKGEFPCKLCNAVFPNLRALKGHNRTHLGVGPGMPYPCNICPYTSTDKTTLTRHLKTHNGDRPFECAECGYAFTTKANCERHVRNRHGIHDKNDVQKMIIYHPTEDSTNESLDRSTSKGVKDEVRKALVYPKEDLLHHNHYTVMALHSDIKIKEESKDQNKEINPISQLNQLNQLNQMTQLNQINQLNQINQINQINLQMNHYDQSEVFPRPNSVQPLELTLRTSPQHLVVKSENSRVEEDLESRSSEGSVSLVNETKPDVHQRIQASPMNLKKLANDSSNVTSSDDGPLDLSMDVLDLSKKPKEKPEVNGNFENQNENQKDFYNTANPLLLTQALLKARQVGSPPTSLEALYANAHANMIYNNLALGSGAGLIAPYFYNPLFDQGYAMKERLQKELVRGLQTSGGTLVEQPVESAGFNSNYPPTRHPQQMEEQMNYSNLMQSKVSSKVISPRERISESPSSNSVKMVIKNGVLMRKQKQRRYRTERPFTCEYCSAKFTLKTNMERHIKQQHNELWHRRPRGGHSTRGRPPARPPTLMQNISQTSQSFLRTKSPYDVPSLQKEDQSDYGKHSISDQVKYAILAQQLKGNKTEEQDTDEELIIDEEPGAESRDQPKTMSLLRGKLESTEVKEYWKEEAEQINSSEQPLDLKNEGPEPDKEALASEDDNIERRLVSESEGNSNETTELEAPANEGTVKNEDGAMDLASVPKLIHNASQNYHQFKSQYLSDEDGVVHSISDHSGNHSGSDEKSENSANSTASKKKKKKKKKKASAYSMAPNRVICKYCRREFPWVSSLRRHILTHTGVKPYRCDYCMLDFTTKSNCDRHLNRKHKSLIQRANARNARNSSSPDGQDMRMTNNNTFSTRNVPERPYKCNQCPSSTFATLGNLKKHRSTKHSRKTNSRSETSSSDPQNSDHCQKQNDQSGDDGGSSSSENMENSSAMVEVSKTNQNTSSSTNENPRSCRTSPTSSPGPTDTPFKCHIPNCDNGFADRQDCLDHIKMNHQRDFEILVSKGALQMGINTAEEQQPPPTQHSSDGPRSLDYKDRKVVCAFCMRRFWSAEDLRRHVRTHTGEKPFWCDVCARRFTLKHSMLRHRKKHSPSPRPYAESGDRSPLPYPGSGDEEISPNQPPTITPRSQQHSPALIAATSGSLMIQERMSLPTVATVATGDAAPSNLMRFNPYEKLTTLTGKLTNVQQSHPDATETGNDLISNLLGIKDPGIVDKMLLATPDDAAKLLGVKGNNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00461077; iTF_01390584; iTF_01392265; iTF_01394618; iTF_01393018; iTF_00064718; iTF_01389714; iTF_00201048; iTF_00089881; iTF_00011429; iTF_01393786; iTF_01391455;
- 90% Identity
- -
- 80% Identity
- -