Basic Information

Insect: Synergus magnus
Gene Symbol: RREB1
Assembly: GCA_032275165.1
Location: JAUESH010000020.1:3334006-3349055[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.024 3.2 9.2 0.1 1 23 55 77 55 77 0.97

2 14 0.0016 0.21 12.9 0.2 1 23 91 113 91 113 0.97

3 14 7.7e-06 0.001 20.2 1.7 1 23 119 142 119 142 0.98

4 14 1.8 2.3e+02 3.3 0.9 1 19 306 324 306 326 0.90

5 14 0.0016 0.21 12.9 0.3 1 23 440 462 440 462 0.98

6 14 6.8e-06 0.00089 20.4 0.9 1 23 471 493 471 493 0.98

7 14 0.00027 0.035 15.3 1.4 1 23 499 522 499 522 0.97

8 14 0.00059 0.077 14.3 1.9 1 23 949 972 949 972 0.97

9 14 0.0007 0.092 14.0 0.2 2 23 1242 1263 1241 1263 0.97

10 14 1.5 2e+02 3.5 6.6 1 23 1269 1292 1269 1292 0.97

11 14 0.0074 0.97 10.8 1.5 1 23 1333 1357 1333 1357 0.97

12 14 1.3 1.7e+02 3.7 1.8 1 23 1439 1464 1439 1464 0.96

13 14 0.084 11 7.5 0.2 2 23 1509 1530 1508 1530 0.94

14 14 0.0037 0.49 11.7 4.1 3 23 1538 1558 1536 1558 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.024	3.2	9.2	0.1	1	23	55	77	55	77	0.97
2	14	0.0016	0.21	12.9	0.2	1	23	91	113	91	113	0.97
3	14	7.7e-06	0.001	20.2	1.7	1	23	119	142	119	142	0.98
4	14	1.8	2.3e+02	3.3	0.9	1	19	306	324	306	326	0.90
5	14	0.0016	0.21	12.9	0.3	1	23	440	462	440	462	0.98
6	14	6.8e-06	0.00089	20.4	0.9	1	23	471	493	471	493	0.98
7	14	0.00027	0.035	15.3	1.4	1	23	499	522	499	522	0.97
8	14	0.00059	0.077	14.3	1.9	1	23	949	972	949	972	0.97
9	14	0.0007	0.092	14.0	0.2	2	23	1242	1263	1241	1263	0.97
10	14	1.5	2e+02	3.5	6.6	1	23	1269	1292	1269	1292	0.97
11	14	0.0074	0.97	10.8	1.5	1	23	1333	1357	1333	1357	0.97
12	14	1.3	1.7e+02	3.7	1.8	1	23	1439	1464	1439	1464	0.96
13	14	0.084	11	7.5	0.2	2	23	1509	1530	1508	1530	0.94
14	14	0.0037	0.49	11.7	4.1	3	23	1538	1558	1536	1558	0.98

Sequence Information

Coding Sequence: ATGGTCAGAGAAGAAGGGGTTCCAGCTCTAGAGTCAGAGCAGCAAGCGCGGGTGCTGGAGGGGAAGCCAGTGAATCCAAAGATCGGACTGTATCAGACACACAGCAGCGAGACTCAAACTCACATTGCATCATCGCTATTGattgACCAATCAGAAAGATCGCATCCTTGTCCAGCGTGTCCAACAGTTCTCCCATCAGTCCGGGACTTAACAAATCATCTGCGAAACCACAATTCGCCACGAAGTGTCGACTCCAGCATCGACGAAGAATTTAGCTGCAGAGTATGTTACAAAGTACTCAGTTCGGCCAGTTCCCTAGACCGACACGTTCTTGTGCATTCCGGTGAGCGGCCCTTCAAATGTAAAAAGTGCGACATGGCTTTCACCACCAACGGAAACATGACCCGACACTCAAAAACAGCTCACAATCATCTCTCGCCGAACAGTTGTTCAGATTCTGAAGCCAGCAATGACTCAGAGTCACCgtcaaaaaaattcgaagagTACAACAACAACGACATTGCCAAACGGAACTCGCCTGATCTCATCGACAAAATAGAGTCTCCCAATTTCATCAAGAAAAGGAAATCGCTCGACTACACCGAGGACCTTAGCCTgcagaagaaattcaaaaccAACTTATCAGAGAACCAGAACTACAACTTCCATTCCGACTTTGAGAAGTGCGAATCCGATAATctatcattcaaaaaccacAGGGTGCTGAATCTTAATCAATCAGAGAACAACTTCAACGAAAACTCCCTTAGAAATGTTGCGAGCAACTTGAGACACTCGGTTGAAGGTTTTAGAGACCTGACTTTCGTTGATTTCACCTCGACGAAATACCCTGTCATCGCGAGGGCAAAGTGTGAGGAGTTCCTCCACCGACCAACATCCGGAGATATAGCGAAGTTCCAGTGTTCAAAATGTCTCCGGGCTTTCCCTTGCAAATCTGCTCTAGATTCACACGAACTGGACTGTGGACTTCCCAATGTTCAGTGGAAAGGTAGTGACGTTCAATCCAGAAGGGATGATTTTTTTGCAGGACTCAATCTACAAAACAAGGCAGCCATGACAGAAGCTAAAGAGGGGAAAGACCTCGCTGATATCCAGAGTATCATCAGTCTCACCTCGAGTCCGATTCTCCACAATTTCTCCAGATCCGATGCCAGCACTCCGGACAATTGCAGTAataaaatcaatcagaatgTTGGATCTTCTGGATCCTCAGGAACACTTTCGTCCGAGTATCATGAGGAGGAAACTCAAGACGCTTTTGCAGCTGAGTTTAGAAAAATGAAGCTCAAGGGTGAGTTTCCTTGTAAGCTCTGCAAGGAAATCTTTCCCAACTTGAGGGCCTTGAAAGGACATAACAGGACCCACTTGGGAGTTGGTCCTGGAATGCCCTATCCGTGTAATATCTGTCCCTATACAAGCACTGATAAGACAACCCTCACGAGGCATCTGAAGACGCACAATGGTGATCGACCCTTCGAGTGTGCTGAATGCGGCTACGCTTTCACTACGAAGGCCAACTGCGAGAGGCACGTGAGGAATCGTCATGGGATTCATGACAAAAATGATGTACAGAAGATGATCATCTATCATCCGACTGAGGACTCGACGAATGAAAGTCTGGACAGGAGCTCATCGAGAAGTGTCAAAGATGATGTCAGGAAGGCTCTTGTTTACCCCAAAGAGGAGCCACTTCCCCCTAATCACTACTCCGTTCTGATGCAAACAGACATTAGGATAAAGGAGGAGAGCAAGGTCATCAAGGAGATGAATCCCATAAGTCAGCTAAACCAAATGAATCAGCTTAACCAACTAAATCAGCTAAAACAAATAAGCCAAATCACTCAACTAAATCAAATAAACCAAATGAATCAGATCAACCTTCAAATGAACCACTACGAAAAATCGGAAGTGTTTCCGAGGCCAAAATCAGTTCAACCTCTCGAGTTGACTTATAGAAGTTCCCCCCAACATCTGATCATGAAGTCTGAAGATTCCAAGGTAGATGAGGATTTCGAGTCGAGGTCGTCGGAGGACAGCGTATCTCTAGTCAATGAAACCAAACCGGACGTACACCAAAGAATTCAAGCTAGTCCGATGAACTTAAAGAAAGTTGCAAATGATTCCCCCaacgtgacttcaagtgacgaTGGACCCCTGGATCTCTCGATGGATGTTCTCGACTTGAGTAAGAAGTCAAAGCATATAGAAGTGAACAAGCAAAAAGAAGTGAACAAGCAAAAAGAAGTGAACAAGCAAAAAGAAGTGAACAAGCAAAAAGAAGTGAAAGAAAATTCCGAAGATCAGAACGAGAACCAAAAGGAACTTTACAACGCCGCGAATCCTCTTTTGCTGACAAGAGCTTTGTTAAAATCACGTCAAGTTGGCTCCCCTCCCACTCCCTTGGAAGCTTTGTATGCCAATGCACATGCGAGCATGATCTACAACAATTTTGCTCTAGGATCAGCTGGCGCTGGATTGATATCAccttattttttcaatccaaTTTTTGATCAAGGTTACGTGATGAAGGAAAGATTACAGAATGAACTGGCTAGGGGTCTTCAAACAAGTGGAGGTACTTTGGTTGAGCAGCCACTTGAAAATGCAGGATTTAATACCAGCTACCCTTCAGCAAGAGAGTCCCAACAACTTGAAGAAGAGATGAACTATTCAAACTTGATGCAGCCAAAAATCTCGAGCAAGGTGATTTCACCCAGAGAGAGAATTAGCGAATCACCTTCATCGAATTCTGTCAAAATGGTCATTAAGAATGGTGTCCTCATGAGGAAGCAGAAGCAGAGGAGGTACAGGACTGAAAGACCTTTCACCTGTGAATATTGTTCAGCAAAGTTCACACTCAAAACGAATATGGAGAGGCACATAAAGCAACAGCACAATGCATTGTGGCATCGAAGACCAAGAGGAGCTCATTCGACGAGAGGTCGACCTCCAGCGAGACCTCAAACGAGACCTCCAACGTTGCTACAAGATGTAGGCCAGGCTTCTCAGGCTTACCTGAACACAAGGTCCCCATATGATGTCCCATTGCAAAAAGACGATCAGTCTGATTATGGAAAACACTCTATTTCTGATCAGGTCAAGTATGCAATCCTTGCTCAACAACTGAAGGGAAACAAGCCAGAGGAAAATGAAACTGACGAGGAGTTAATCATCGATGAAGAACCTGGTGTTGAACCTCGAGATCACACAAAGACGATGAGCTTATTGAGAGGGAAGCTCGAAAGTAATCCAGATACGaaagaaaattacaaagaaGATGATCCGATGAATGATGCTGAACAGCCCTTGGAACCCAAGAGCGACGAACCAGAAGAGAAGGAGGTTCTCTCAGATGATGAGAATCATGAGAGAAAAGCTGCTTCCGAAAGCGAAACGATTTCCAATGAGGCCACTGAATTGGAAACCCCAGCAAATGAAGGAACTGTGAAAAACGAGGATGGGGCTGCGGATCTAGCTAGTGTTCCTAAACTGATTCACAATGCCTCTCAGAATTATCATCAGTTCAAATCTCAGTATTTAAGTGACGAGGATGGTGCCGCTCACTCTATTAGTGATCACTCTGGAAACCGTTCCGGAAGTGATGAGAAATCAGAGAACTCTGCTATTTCGACTTCttccaaaagaaaaaagaagaagaagaaaaagaaggctTCTGCTTACTCCATGGCACCCAACAGAGTGGAGTGTAAATACTGTAAAAGAGCATTTCCCTGGGTTTCTTCACTGAGAAGACATATCCTCACCCACACTGGAGTCAAGCCTTACAGATGTGAGCATTGCATGTTGGATTTTACGACAAAGTCTAACTGTGATCGTCACTTGAATAGGAAACACAAGAGTCTTCTTCAGCGAGCAAATGCTAGAAACACGAGGAATTCTTCCTCCCCGGATGGTCAAGATATGAGAGTAACGAATAACAATACTTTTTCAACGAGGAATGTTCCAGAGAGACCCTACAAGTGTAATCAATGTCCTAGTTCGACTTTTGCAACCTTGGGGAATCTGAAGAAACACAGATCGACTAAACACTCCAGAGAGACGAATTCTAGGTCTGAAACTTCTTCCAGTGACCCTCAGAATTCTGATAACTGTCAGAAACAGAACGATCAAAGTGGAGACGATTGTGGCTCGTCGAGTTCCGAGAATATGGAGAATTCATCTGCTGTGGTGGAGGTTTCCAAGTCGAGTCAAAACACTTCCTCTTCGACGAATGAGAATGCAAGGTCGTGTAGGACCTCACCAACCTCTTCACCTGGACCAACAGACACGCCCTTCAAGTGTCATATTCCGAACTGCGATAATGGGTTCGCTGATCGTCAGGATTGCTTGGATCATATCAAGATGAATCATGAGCGAGACTATGAGATCTTAGTTTCCAAGGGTGCTCTGCAGATGGGGATCCATGCTGCTGAGGAACAACCTCCACCGACTCAGCATTCGAGCGATGGTCCCAGGTCCCTTGACTacaaagatagaaagGTGGTCTGTGCATTCTGCATGCGTCGATTCTGGTCAGCCGAAGATCTCCGTCGACACGTGAGAACTCACACAGGGGAAAAGCCATTCTGGTGTGACATTTGCGACCGGAGATTCACCCTGAAGCATAGTATGCTTCGTCACCGGAAGAAGCACGAATCAGCGGACTCAACAATGTATGTTGGAAGTGGTGATGAGGAAATTTCTCCCAGCCACCCCCCTACAATCACTCCCAGAAGTCAGCAACAATCCCCAGCTCTAATTGCAGCAACCTCAGGAAATTCAATGATCCAAGAGAGATTGTCCTTGCCAACAGTAGCGACTGTAGCGACTGGAGATGCTGCACCTAGTGGACTGATGAGGTTCAACCCCTATGAAAAACTTACAACTTTAACTGGCAAATTATCTCAGCAGAGCAACCCTGACACCAATGAAAGTGGCAATGATCTGATCTCAAATTTACTGGGTATCAAGGATCCAGGGATTGTTGACAAAATGCTTCTTGCAACTCCCGATGATGCCGCAAAGCTTTTAGGAGTCAAAGGCAACAACGAGTGA
Protein Sequence: MVREEGVPALESEQQARVLEGKPVNPKIGLYQTHSSETQTHIASSLLIDQSERSHPCPACPTVLPSVRDLTNHLRNHNSPRSVDSSIDEEFSCRVCYKVLSSASSLDRHVLVHSGERPFKCKKCDMAFTTNGNMTRHSKTAHNHLSPNSCSDSEASNDSESPSKKFEEYNNNDIAKRNSPDLIDKIESPNFIKKRKSLDYTEDLSLQKKFKTNLSENQNYNFHSDFEKCESDNLSFKNHRVLNLNQSENNFNENSLRNVASNLRHSVEGFRDLTFVDFTSTKYPVIARAKCEEFLHRPTSGDIAKFQCSKCLRAFPCKSALDSHELDCGLPNVQWKGSDVQSRRDDFFAGLNLQNKAAMTEAKEGKDLADIQSIISLTSSPILHNFSRSDASTPDNCSNKINQNVGSSGSSGTLSSEYHEEETQDAFAAEFRKMKLKGEFPCKLCKEIFPNLRALKGHNRTHLGVGPGMPYPCNICPYTSTDKTTLTRHLKTHNGDRPFECAECGYAFTTKANCERHVRNRHGIHDKNDVQKMIIYHPTEDSTNESLDRSSSRSVKDDVRKALVYPKEEPLPPNHYSVLMQTDIRIKEESKVIKEMNPISQLNQMNQLNQLNQLKQISQITQLNQINQMNQINLQMNHYEKSEVFPRPKSVQPLELTYRSSPQHLIMKSEDSKVDEDFESRSSEDSVSLVNETKPDVHQRIQASPMNLKKVANDSPNVTSSDDGPLDLSMDVLDLSKKSKHIEVNKQKEVNKQKEVNKQKEVNKQKEVKENSEDQNENQKELYNAANPLLLTRALLKSRQVGSPPTPLEALYANAHASMIYNNFALGSAGAGLISPYFFNPIFDQGYVMKERLQNELARGLQTSGGTLVEQPLENAGFNTSYPSARESQQLEEEMNYSNLMQPKISSKVISPRERISESPSSNSVKMVIKNGVLMRKQKQRRYRTERPFTCEYCSAKFTLKTNMERHIKQQHNALWHRRPRGAHSTRGRPPARPQTRPPTLLQDVGQASQAYLNTRSPYDVPLQKDDQSDYGKHSISDQVKYAILAQQLKGNKPEENETDEELIIDEEPGVEPRDHTKTMSLLRGKLESNPDTKENYKEDDPMNDAEQPLEPKSDEPEEKEVLSDDENHERKAASESETISNEATELETPANEGTVKNEDGAADLASVPKLIHNASQNYHQFKSQYLSDEDGAAHSISDHSGNRSGSDEKSENSAISTSSKRKKKKKKKKASAYSMAPNRVECKYCKRAFPWVSSLRRHILTHTGVKPYRCEHCMLDFTTKSNCDRHLNRKHKSLLQRANARNTRNSSSPDGQDMRVTNNNTFSTRNVPERPYKCNQCPSSTFATLGNLKKHRSTKHSRETNSRSETSSSDPQNSDNCQKQNDQSGDDCGSSSSENMENSSAVVEVSKSSQNTSSSTNENARSCRTSPTSSPGPTDTPFKCHIPNCDNGFADRQDCLDHIKMNHERDYEILVSKGALQMGIHAAEEQPPPTQHSSDGPRSLDYKDRKVVCAFCMRRFWSAEDLRRHVRTHTGEKPFWCDICDRRFTLKHSMLRHRKKHESADSTMYVGSGDEEISPSHPPTITPRSQQQSPALIAATSGNSMIQERLSLPTVATVATGDAAPSGLMRFNPYEKLTTLTGKLSQQSNPDTNESGNDLISNLLGIKDPGIVDKMLLATPDDAAKLLGVKGNNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677055;
90% Identity: iTF_01394618;
80% Identity: -