Basic Information

Insect: Synergus itoensis
Gene Symbol: RREB1
Assembly: GCA_904066005.1
Location: CAJFCP010000086.1:861336-868573[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.017 2.3 9.6 0.1 1 23 107 129 107 129 0.97

2 14 0.0015 0.21 12.9 0.2 1 23 143 165 143 165 0.97

3 14 7.5e-06 0.001 20.2 1.7 1 23 171 194 171 194 0.98

4 14 1.8 2.4e+02 3.3 0.9 1 19 358 376 358 378 0.90

5 14 0.0016 0.21 12.9 0.3 1 23 492 514 492 514 0.98

6 14 6.7e-06 0.00091 20.3 0.9 1 23 523 545 523 545 0.98

7 14 0.00026 0.035 15.3 1.4 1 23 551 574 551 574 0.97

8 14 0.00058 0.079 14.2 1.9 1 23 985 1008 985 1008 0.97

9 14 0.00075 0.1 13.9 0.3 2 23 1278 1299 1277 1299 0.97

10 14 1.5 2e+02 3.5 6.6 1 23 1305 1328 1305 1328 0.97

11 14 0.0072 0.98 10.8 1.5 1 23 1369 1393 1369 1393 0.97

12 14 1.3 1.7e+02 3.7 1.8 1 23 1475 1500 1475 1500 0.96

13 14 0.082 11 7.5 0.2 2 23 1545 1566 1544 1566 0.94

14 14 0.0036 0.49 11.7 4.1 3 23 1574 1594 1572 1594 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.017	2.3	9.6	0.1	1	23	107	129	107	129	0.97
2	14	0.0015	0.21	12.9	0.2	1	23	143	165	143	165	0.97
3	14	7.5e-06	0.001	20.2	1.7	1	23	171	194	171	194	0.98
4	14	1.8	2.4e+02	3.3	0.9	1	19	358	376	358	378	0.90
5	14	0.0016	0.21	12.9	0.3	1	23	492	514	492	514	0.98
6	14	6.7e-06	0.00091	20.3	0.9	1	23	523	545	523	545	0.98
7	14	0.00026	0.035	15.3	1.4	1	23	551	574	551	574	0.97
8	14	0.00058	0.079	14.2	1.9	1	23	985	1008	985	1008	0.97
9	14	0.00075	0.1	13.9	0.3	2	23	1278	1299	1277	1299	0.97
10	14	1.5	2e+02	3.5	6.6	1	23	1305	1328	1305	1328	0.97
11	14	0.0072	0.98	10.8	1.5	1	23	1369	1393	1369	1393	0.97
12	14	1.3	1.7e+02	3.7	1.8	1	23	1475	1500	1475	1500	0.96
13	14	0.082	11	7.5	0.2	2	23	1545	1566	1544	1566	0.94
14	14	0.0036	0.49	11.7	4.1	3	23	1574	1594	1572	1594	0.98

Sequence Information

Coding Sequence: ATGCACGAGTATGAGCTTATCCCGTACTCAGGCTTCCAAGACGTGATATATAGTCCTCTTTTTCTATCTTTATCACCGATCAATGCCGATAAGCTCAATGTTATCAGCGTCACTGATCGATCGTTCGACGTTTCTCAGCATGAATCCGCTCTCGTTCCTCCGTGTCCAACTCACATTCAATTGCATCATTTCATGTGCTTAATTAACTTCTTCTTTCTGATTTCAGTGAATCCAAAGATCGGCCTGTATCAGACACACAGCAGCGAGACTCAAACTCACATTGCATCATCGCTATTGATTGACCAATCAGAAAGATCGCATCCTTGTCCAGCGTGTCCAACAGTTCTCCCAACAGTTCGGGACTTAACAAATCATCTGCGAAATCACAATTCGCCACGAAGTATCGACTCCAGCATCGACGAAGAATTTAGCTGCAGAGTATGTTACAAAGTACTCAGTTCGGCCAGTTCCCTAGACCGTCACGTTCTTGTGCATTCCGGTGAGCGGCCCTTCAAATGTAAAAAGTGCGACATGGCTTTCACCACCAATGGAAACATGACCCGACACTCAAAAACAGCTCACAATCATCTCTCACCGAACAGTTGTTCAGATTCTGAAGCCAGCAATGACTCAGAGTCACCCTCAAAAAAATTCGAAGAGTATAACAACAACGACATCGCTAAACGGAACTCGCCTGACCTCATCGACAAAATAGAGTCTCCCAATTTCATCAAAAAAAGGAAATCGCTCGACTACACCGAGGACCTCAGCCTTCAGAAGAGATTTAAAACCAACTTATCAGAGAACCAGAATTACAACTGCCATTCCGACTTTGAAAAGTGCGAACCTGATAATCTATCATTCAAAAACCACAGGGTGCTGAATCTTAATCGATCAGAGAACAACTTCAACGAAAACTCTCTTCGAAATGTTGCGAGGAACTTGAGACACTCGGTTGAAGGTTTTACAGACCTGACTTTTGTTGATTTCACCTCGAAGAAATACCCTGTCATCGCGAGGGCAAAATGTGAGGAGTTCCTCCACCGACCAACATCAGGAGATATTGCCAAGTTCCAGTGTTCGAAATGTCTCCGGGCTTTCCCTTGCAAATCTGCTCTAGACTCACATGAACTGGACTGTGGACTTTCCAATGTTCAGTGGAAAGGTAGTGACGTTCAATCCAGAAGGGATGATTTTTTTGCGGGACTGAATCTACAAAACAAGGCAGCCATGACAGAAGCTAAAGAGGGGAAAGACCTCGCTGATATCCAGAGTATCATCAGTCTCACCTCGAGTCCGATTCTCCATAATTTCTCCAGATCCGATGCCAGCACTCCTGACAATTGCAGCAATAGAATCAATCAGAATGTTGGATCTTCTGGATCTTCAGGAACACTTTCGTCTGAGTATCATGAAGAGGAAACTCAAGACGCTTTTGCAGCTGAATTTAGAAAAATGAAGCTCAAGGGTGAGTTTCCTTGCAAGCTCTGCAAGGAAATCTTTCCTAACTTGAGGGCCTTGAAAGGACATAACAGGACCCATTTGGGAGTTGGACCTGGAATGCCCTATCCGTGTAATATCTGTCCCTACACAAGCACTGATAAGACAACCCTCACGAGGCATCTGAAGACGCATAATGGTGATCGACCCTTCGAGTGTGCTGAGTGCGGCTATGCTTTCACTACCAAGGCCAACTGTGAGAGACACGTGAGGAATCGTCATGGGATTCATGACAAAAATGATGTTCAGAAGATGATCATTTATCATCCAACTGAGGACTCGACGAATGAAAGTCTGGATAGAAGCTCATCGAGAAGTGTCAAAGATGATGTTAGGAAGGCTCTTGTTTACCCCAAAGAGGAGCTAGTTCCCCCTAATCACTACTCCGTTCTGATGCAAACAGATATTAGGATAAAGGACGAGAGCAAGGTCATCAAGGAGATGAATCCCATAAGCCAGCTAAACCAAATGAATCAGCTGAGTCAACTAAATCAGCTGAAACAAATGAGCCAAATAACTCGTCTAAATCAATTAAACCAAATAAATCAGATCAACGTTCAAATGACTCACTACGAAAAATCGGAAGTGTTTCCGAGGCCAAAATCAGTTCAACCTCTCGAGTTGACTTATGGAAGTTCCCCCCAGAATCTGATCACGAAATCTGAAGATTCCAAGATAGATGAGGATTTTGAGTCGAGGTCATCGGAGGACAGCGTATCTCTAGTCAATGATACCAAACCGGACGTACACCAAAGAATTCAAGCTAGTCCGATGAACTTGAAGAAAGTTGCAAATGATTCCCCCAACGAGACTTCGAGTGACGATGGACCCCTGGATCTCTCGATGGATGTTCTCGACCTGAGTAAGAAGTCAAAGAATATAGAAGTTAATCATCAAAAAGAAGTGAATGAAAATTCCGAGGATCAGAACGAGAACCAAAAGGAACTTTACAACGCCGCGAATCCTCTTTTGCTGACAAGAGCTTTGTTAAAATCAAGTCAAGTTGGCCCCCCTTCCAATCCCTTCGATGCTTTGTATGCCAATGCGCAGGCGCAGGCGAGCATGATCTACAATAATTTTGCTCTAGGATCAGCTGGCGCTGGGTTGATACCACCTTATTTTTTCAATTCAATTTTTGATCAAGGTTACGTGATGAAGGAAAGATATCAGAAGGAACTAGCTAGAGGTCTTCAAACAAGTGGAGGTACTTTGGTTGAGCAATCACTTGAAAATGCAGGATTCAATACCAGTTATCCTTCAGTAAGAAACTCCCAACAACTTGAAGAAGAAATGAGCTATACAAACTTGATGCAGTCAAAAATCTCGAGCAAGGTGATCTCACCCAGAGAGAGAATTAGCGAATCACCTTCATCGAATTCTGTCAAAATGGTCATTAAGAATGGTGTCCTCATGAGGAAGCAGAAGCAGAGGAGGTACAGGACTGAAAGACCTTTCACCTGTGAATATTGCTCAGCAAAGTTCACACTCAAAACGAATATGGAGAGGCACATAAAACAACAGCACAATGCATTGTGGCATCGAAGACCTAGAGGAGCTCATTCGACAAGAGGTCGACCTCCAGCGAGACCTCAAACGAGACCTCCAACGTTGCTGCAAGATGTAGGCCAGGCTTCTCAGGCTTACTTGAACACAAGGTCCCCGTATGATGTCCCGTTGCAAAAAGACGATCAGTCTGATTACGGAAAACACTCTATTTCTGATCAGGTCAAGTATGCAATCCTTGCTCAACAACTGAAGGGAAACAAGCCAGAGGAAAATGAAACTGACGAGGAGTTAATCATCGACGAAGAACCTGGTGCGGAACCTCGAGATCATACAAAGACGTTGAGCTTATTGAGAGGGAAGCTTGAAAGTAATTCAGAAACGAAAGAAAATTACAAAGAAGATGATCCGATGAATGATGCTGAACAACCCTTGGAGCCCAGGAGCGACGCACCAGAAGAGAAGGAGGTTCTCTCGGATAATGAAAATCATGAGAGAAGAGCTGCTTCCGAAAGCGAAACGATTTCGAATGAGGCCACTGAATTGGAAACCCCAGCAAATGAAGGAACTGTGAAAAACGAGGATGGGGCTGTGGATCTGGCCAGTGTTCCTAAACTGATTCACAATGCTTCACAGAATTATCATCAGTTCAAATCTCAGTATTTAAGTGATGAGGATGGTGCCGCTCACTCTATTAGTGATCACTCTGGAAACCGTTCCGGAAGTGATGAGAAATCAGAGAACTCTGCTATTTCGACTTCTTCCAAAAGAAAAAAGAAGAAGAAGAAAAAAAAGGCTTCTGCTTACTCAATGGCTCCTAACAGAGTGGAGTGTAAATACTGTAAAAGAGCATTCCCCTGGATTTCTTCACTGAGAAGACATATCCTCACCCACACTGGAGTCAAGCCTTACAGATGCGAGCATTGCATGTTGGATTTTACGACAAAGTCTAACTGTGATCGTCACTTGAATAGGAAACACAAGAGTCTTCTTCAGCGAGCAAATGCTAGAAACACGAGAAATTCTTCCTCTCCGGATGGTCAAGATATGAGAGTGACGAATAACAATACTTTTTCAACGAGGAATGTTCCAGAGAGACCCTACAAGTGTAATCAATGTCCTAGTTCGACTTTTGCAACCTTGGGGAATCTGAAGAAACATAGATCGACTAAACACTCTAGAGAGACGAATTCTAGGTCTGAGACTTCTTCCAGTGAACCTCAGAATTCTGATAACTGTCAGAAACAGAACGATCAAAGTGGAGATGATTGTGGATCGTCCAGTTCCGAGAACATGGAAAATTCATCTGCTGTGGTGGAGGTTTCCAAGTCGAGTCAAAACACTTCCTCTTCGACGAATGAGAATGCAAGGTCATGCAGGACCTCACCAACCTCTTCACCTGGACCAACAGACACGCCCTTCAAGTGTCATATTCCAAACTGCGATAATGGATTCGCTGATCGTCAGGACTGCTTGGATCATATCAAAATGAATCACGAACGGGACTATGAGATCTTGGTTTCCAAGGGTGCTTTGCAGATGGGAATCCATGCTGCTGAGGAACAACCTCCACCGACTCAGCATTCGAGCGATGGTCCCAGGTCCCTTGACTACAAAGATAGAAAGGTGGTCTGTGCATTCTGCATGCGTCGATTCTGGTCAGCCGAAGATCTGCGTCGACATGTGAGAACTCACACAGGAGAAAAGCCCTTCTGGTGTGACATTTGCGACCGGAGATTCACCCTGAAGCATAGTATGCTTCGTCACCGGAAGAAGCACGAGTCAGCGGACTCAACAATGTATGTTGGAAGTGGTGATGAGGAAATTTCTCCCAGCCACCCTCCTACAATCACTCCCAGAAGTCAGCAACAATCTCCAGCTCTAATTGCAGCGACCTCAGGAAGTTCAATGATCCAAGAGAGAATGTCTTTGCCAACAGTAGCGACTGTAGCAACTGGAGATGCTGCACCTAGTGGACTGATGAGGTTCAACCCCTATGATAAACTTACAACTTTAACGGGCAAATTATCTCAGCAGAGCAACTCTGACAACACTGAAAGTGGCAATGATCTGATCTCAAATTTACTGGGTATCAAGGATCCAGGGATTGTTGACAAAATGCTTCTTGCAACTCCCGATGATGCCGCAAAACTTTTAGGAGTCAAGGGTAACAGCGAGTGA
Protein Sequence: MHEYELIPYSGFQDVIYSPLFLSLSPINADKLNVISVTDRSFDVSQHESALVPPCPTHIQLHHFMCLINFFFLISVNPKIGLYQTHSSETQTHIASSLLIDQSERSHPCPACPTVLPTVRDLTNHLRNHNSPRSIDSSIDEEFSCRVCYKVLSSASSLDRHVLVHSGERPFKCKKCDMAFTTNGNMTRHSKTAHNHLSPNSCSDSEASNDSESPSKKFEEYNNNDIAKRNSPDLIDKIESPNFIKKRKSLDYTEDLSLQKRFKTNLSENQNYNCHSDFEKCEPDNLSFKNHRVLNLNRSENNFNENSLRNVARNLRHSVEGFTDLTFVDFTSKKYPVIARAKCEEFLHRPTSGDIAKFQCSKCLRAFPCKSALDSHELDCGLSNVQWKGSDVQSRRDDFFAGLNLQNKAAMTEAKEGKDLADIQSIISLTSSPILHNFSRSDASTPDNCSNRINQNVGSSGSSGTLSSEYHEEETQDAFAAEFRKMKLKGEFPCKLCKEIFPNLRALKGHNRTHLGVGPGMPYPCNICPYTSTDKTTLTRHLKTHNGDRPFECAECGYAFTTKANCERHVRNRHGIHDKNDVQKMIIYHPTEDSTNESLDRSSSRSVKDDVRKALVYPKEELVPPNHYSVLMQTDIRIKDESKVIKEMNPISQLNQMNQLSQLNQLKQMSQITRLNQLNQINQINVQMTHYEKSEVFPRPKSVQPLELTYGSSPQNLITKSEDSKIDEDFESRSSEDSVSLVNDTKPDVHQRIQASPMNLKKVANDSPNETSSDDGPLDLSMDVLDLSKKSKNIEVNHQKEVNENSEDQNENQKELYNAANPLLLTRALLKSSQVGPPSNPFDALYANAQAQASMIYNNFALGSAGAGLIPPYFFNSIFDQGYVMKERYQKELARGLQTSGGTLVEQSLENAGFNTSYPSVRNSQQLEEEMSYTNLMQSKISSKVISPRERISESPSSNSVKMVIKNGVLMRKQKQRRYRTERPFTCEYCSAKFTLKTNMERHIKQQHNALWHRRPRGAHSTRGRPPARPQTRPPTLLQDVGQASQAYLNTRSPYDVPLQKDDQSDYGKHSISDQVKYAILAQQLKGNKPEENETDEELIIDEEPGAEPRDHTKTLSLLRGKLESNSETKENYKEDDPMNDAEQPLEPRSDAPEEKEVLSDNENHERRAASESETISNEATELETPANEGTVKNEDGAVDLASVPKLIHNASQNYHQFKSQYLSDEDGAAHSISDHSGNRSGSDEKSENSAISTSSKRKKKKKKKKASAYSMAPNRVECKYCKRAFPWISSLRRHILTHTGVKPYRCEHCMLDFTTKSNCDRHLNRKHKSLLQRANARNTRNSSSPDGQDMRVTNNNTFSTRNVPERPYKCNQCPSSTFATLGNLKKHRSTKHSRETNSRSETSSSEPQNSDNCQKQNDQSGDDCGSSSSENMENSSAVVEVSKSSQNTSSSTNENARSCRTSPTSSPGPTDTPFKCHIPNCDNGFADRQDCLDHIKMNHERDYEILVSKGALQMGIHAAEEQPPPTQHSSDGPRSLDYKDRKVVCAFCMRRFWSAEDLRRHVRTHTGEKPFWCDICDRRFTLKHSMLRHRKKHESADSTMYVGSGDEEISPSHPPTITPRSQQQSPALIAATSGSSMIQERMSLPTVATVATGDAAPSGLMRFNPYDKLTTLTGKLSQQSNSDNTESGNDLISNLLGIKDPGIVDKMLLATPDDAAKLLGVKGNSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677055;
90% Identity: iTF_01389714;
80% Identity: -