Basic Information

Insect: Synergus gifuensis
Gene Symbol: RREB1
Assembly: GCA_904066015.1
Location: CAJFCO010000048.1:558802-573150[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.018 2.4 9.5 0.1 1 23 205 227 205 227 0.97

2 14 0.0016 0.22 12.8 0.2 1 23 241 263 241 263 0.97

3 14 7.9e-06 0.0011 20.1 1.7 1 23 269 292 269 292 0.98

4 14 1.8 2.5e+02 3.2 0.9 1 19 456 474 456 476 0.90

5 14 0.0016 0.23 12.8 0.3 1 23 590 612 590 612 0.98

6 14 7e-06 0.00097 20.2 0.9 1 23 621 643 621 643 0.98

7 14 0.00027 0.038 15.2 1.4 1 23 649 672 649 672 0.97

8 14 0.00061 0.084 14.1 1.9 1 23 1077 1100 1077 1100 0.97

9 14 0.00084 0.12 13.7 0.2 2 23 1369 1390 1368 1390 0.97

10 14 1.5 2.1e+02 3.4 6.6 1 23 1396 1419 1396 1419 0.97

11 14 0.0076 1.1 10.7 1.5 1 23 1459 1483 1459 1483 0.97

12 14 1.3 1.8e+02 3.6 1.8 1 23 1565 1590 1565 1590 0.96

13 14 0.086 12 7.4 0.2 2 23 1635 1656 1634 1656 0.94

14 14 0.0038 0.53 11.6 4.1 3 23 1664 1684 1662 1684 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.018	2.4	9.5	0.1	1	23	205	227	205	227	0.97
2	14	0.0016	0.22	12.8	0.2	1	23	241	263	241	263	0.97
3	14	7.9e-06	0.0011	20.1	1.7	1	23	269	292	269	292	0.98
4	14	1.8	2.5e+02	3.2	0.9	1	19	456	474	456	476	0.90
5	14	0.0016	0.23	12.8	0.3	1	23	590	612	590	612	0.98
6	14	7e-06	0.00097	20.2	0.9	1	23	621	643	621	643	0.98
7	14	0.00027	0.038	15.2	1.4	1	23	649	672	649	672	0.97
8	14	0.00061	0.084	14.1	1.9	1	23	1077	1100	1077	1100	0.97
9	14	0.00084	0.12	13.7	0.2	2	23	1369	1390	1368	1390	0.97
10	14	1.5	2.1e+02	3.4	6.6	1	23	1396	1419	1396	1419	0.97
11	14	0.0076	1.1	10.7	1.5	1	23	1459	1483	1459	1483	0.97
12	14	1.3	1.8e+02	3.6	1.8	1	23	1565	1590	1565	1590	0.96
13	14	0.086	12	7.4	0.2	2	23	1635	1656	1634	1656	0.94
14	14	0.0038	0.53	11.6	4.1	3	23	1664	1684	1662	1684	0.98

Sequence Information

Coding Sequence: ATGGTCAGAGAAGAAGGGGTTCCAGCTCTAGTCAGAGCAACTAGCGCGGGTGCTGGAGGGGAAGACAGCTGTTTCTTCTTGAGCTGTTTTAATCCCTTGATTTTATCCCAAGTGGAAATTACATGGTTGAACCGATACTTACAACCTGCGCGGTACTGCACCAGTTGTAATGTACCAATATTGGATAGCCAAAGCTGGCGCAGTACTGACTTTACCATTGGGTCAGTACTGTATCAGTGCTGCAGTACTGTAACAGTTCTTCACCAGTACTTGAATCCAGTACAGAAACAAACCTGGCTAATCAGTACTGAACAGCTTTATCATCCCAACACTCAGCCAGATCTGCGCCAGTACCTCTTCCAACACCACGCCAGTGTTAGCCAGTGTTGGCCTGTACTGGCACTATACTACGCCAATTGTAAATTTCCACTTGGGATAGATGTCTTCATATTCACTATATTGTTATTATCATTTTTTGCTAGAAGAGAATTAGGACCGCAAAAATTTGATGATTTAGTGAATCCAAAGATCAGCCTGTATCAGACACACAGCAGCGAGACGACTCAAACTCACATTGCATCATCGCTATTGATTGACCAATCAGAAAGATCGCATCCTTGTCCAGCGTGTCCAACAGTTCTCCCAACAGTTAGGGACTTAACAAATCATCTGCGAAATCACAATTCGCCACGAAGTATCGACTCCAGCATCGACGAAGAATTTAGCTGCAGAGTATGTTACAAAGTACTCAGTTCGGCCAGTTCCCTAGACCGTCACGTTCTTGTGCATTCCGGTGAGCGGCCCTTCAAATGTAAAAAGTGCGACATGGCTTTCACCACCAACGGAAACATGACCCGACACTCAAAAACAGCTCACAATCATCTCTCGCCGAACAGTTGTTCAGATTCTGAAGCCAGCAATGACTCAGAGTCACCCTCAAAAAAATTCGAAGAGTACAACAACAACGACATCGCTAAACGGAACTCGCCTGACCTCATCGACAAAATAGAGTCTCCCAATTTCATCAAAAAAAGAAAATCGCTCGACTACACCGAGGACCTCAGCCTGCAGAAGAAATTCAAGGCCAATTTGTCAGAGAATCAGAATTACAACTGCCATTCCGACTTTGAAAAGTGCGAACCCGACAACTTGTCATTCAAAAACCACAGGGTGCTGAATCTTAATCGATCAGAGAATAACATCAACGAAAACTCTCTTCGAAATGTTGCGAGGAACTTGAGACACTCAGTTGAAGGTTTTACAGATCTGACTTTCGTTGATTTCACCTCGAAGAAATATCCTGTCATCGCGAGGGCAAAATGTGAGGAGTTCCTCCACCGACCAACATCCGGAGATATGGCGAAGTTCCAGTGTTCAAAATGTCTCCGGGCTTTTCCATGCAAATCTGCTCTAGACTCACACGAACTGGACTGTGGACTTTCCAATGTTCAGTGGAAAGGTAGTGACGTTCAATCCAGAAGGGATGATTTTTTTGCGGGACTTAATCTACAAAACAAGGCAGCCATGACAGAAGCTAGAGAGGGGAAAGACCTCGCTGATATCCAGAGTATCATCAGTCTCACCTCGAGTCCGATTCTCCATAATTTTTCCAGATCCGATGCCAGCACTCCTGACAATTGCAGCAATAGAATCAATCAGAATGTTGGATCTTCTGGATCTTCAGGAACACTTTCGTCTGAGTATCATGAAGAGGAAACTCAAGATGCTTTTGCAGCTGAATTTAGAAAAATGAAGCTCAAGGGTGAGTTTCCTTGCAAGCTCTGCAAGGAAATCTTTCCCAACTTGAGGGCCTTGAAAGGACATAACAGGACCCACTTGGGAGTTGGGCCTGGAATGCCCTATCCGTGTAATATCTGTCCCTACACAAGCACTGATAAGACAACCCTCACGAGACATCTAAAGACGCACAATGGTGATCGACCCTTCGAGTGTGCTGAGTGCGGCTATGCTTTCACTACCAAGGCCAACTGCGAAAGGCACGTGAGGAATCGTCATGGGATTCATGACAAAAATCATGTTCAGAAGATGATCATTTATCATCCAACTGAGGACTCGACGAATGAAAGTCTGGATAGGAGCTCATCGAGAAGTGTCAAAGATGATGTTAGGAAGACTCTTGTTTACCCCAAAGAGGAGCCAGTTCCCCCTAATCACTACTCCGTTCTGATGCAAACAGATATTAGGATAAAGGACGAGAGCAAGGTCATCAAGGAGATGAATCCCATAAGTCAGCTGAATCAGCTGAGTCACCTAAATCAAATGAAATTAAACGAAATCACTCGTCTGAATCAAATAAACCAAATGAATCAGATTAACGTTCAAATGAATCCCTACGAAAAATCGGAAGTGTTTCCGAGGCCAAAATCAGTTCAACCTCTCGAGTTGACTTATGGAAGTTCCCCTCAGAATCTGATCACGAAATCTGAAGATTCCAAGGTAGATGAGGATTTCGAGTCGAGGTCGTCGGAGGACAGCGTATCTCTAGTCAATGAAACCAAACCGGACGTACACCAAAGAATTCAAGCTAGTCCGATGAACTTGAAGAAAGTAAGAAATGATTCCCCCAACGTGACTTCGAGTGACGATGGACCCCTGGATCTCTCGATGGATGTTCTCGACCTGAGTAAGAAGTCAAAGAATATAGAAGTTAATCAGCAAAAAGAAGTGAACGAAAATTCCGAGGATCAGAACGAGAACCAAAAGGAACTTTACAACGCTGCGAATCCTCTTTTTCTGACAAAAGCTTTGTTAAAATCACATCAAGTTGGCTCCCCTTCCATTCCCTTGGAAGCTTTGTATGTCAAGGCACAAGCGAACATGATCTACAACAATCTTGGTCTAGGATCAGCTGGCGCTGGGTTCATACCACCTTATTTTTTTAATTCAATTTTTGATCAAGGTTACGTAATGAAGGAAAGATTACAGAATGAACTGGCTAGAGGTCTTCAAACAAGTGGAGGTACTTTGGTTGAGCAGTCACTTGAAAATGCAGGATTCAATACCAGCTATCCTTTAGCAAGAAACTCCCAACAACTTGAAGAAGAGATGAGCTATACAAACATGATGCAGCCAAAAATCTCGAGCAAGGTGATCTCACCCAGAGAGAGAATTAACGAATCACCTTCATCGAATTCAGTCAAAATGGTGATTAAGAATGGTGTCCTCATGAGGAAGCAGAAGCAGAGGAGGTACAGGACTGAAAGACCTTTCACTTGTGAATATTGCTCAGCAAAGTTCACACTCAAAACGAATATGGAGAGACACATAAAGCAACAGCACAATGCATTGTGGCATCGAAGACCTAGAGGACCTCATTCGACAAGAGGTCGACCTCCAACGAGACCTCAAACGAGACCTCCAACGTTGCTGCAAGATGTAGGCCAGGCTTCTCAGGCTTACTTGAACATAAGATCCCCATATGATGTCCCATTGCAAAAAGACGATCAGTCTGATTATGGAAAACACTCTATTTCTGATCAGGTCAAGTATGCAATCCTTGCTCAACAACTGAAGGGAAACAAGCCAGAAGAAAATGAAACTGACGAGGAGTTAATCATCGATGAAGAACCTGGTGCAGAACCTCGAGATCATACAAAGACGTTGAGCTTATTGAGAGGGAAGCTCGAAAGTAATTCAGAAACAAAAGAAAATTACAAAGAAGATGATACGATGAATGATGCTGAACAACCCTTGGAGCCCAGGAGCGACGCACCAGAAGAGAAGGAGGTTCTCTCGGATGATGAAAATCATGAGAGAAGAGCTGCTTCCGAAAACGAAACGATTTCCAATGAGGCCACTGAATTGGAAACCCCAGCAAACGAAGGAACTGTGAAAAATGAGGATGGGGCTGTGGATCTGGCCAGTGTTCCTAAATTGATTCACAATGCCTCACAGAATTATCATCAATTCAAATCTCAGTATTTAAGTGACGAGGATGGTGCCGCTCACTCTATTAGTGATCACTCTGGAAATCGTTCCGGAAGTGATGAGAAATCAGAGAACTCTGTTATTTCGACTTCTTCAAAAAGAAAAAAGAAGAAGAAAAAGAAGGCTTCTGCTTATTCTATGGCTCCTAACAGAGTAGTGTGTAAATACTGTAAAAGAGCATTCCCCTGGATTTCTTCACTGAGAAGACATATTCTCACCCACACTGGAGTCAAGCCTTACAGATGTGAGCATTGCATGTTGGATTTTACGACAAAGTCTAACTGTGACCGTCACTTGAATAGAAAACACAAGAGTATCCTTCAGCGAAATGCTAGAAACACGAGGAATTCTTCCTCTCCGGATGGTCAAGATATGAGAGTGACAAATAACAATACTTTTTCAACAAGAAATGTTCCAGAGAGACCCTACAAGTGTAATCAATGTCCTAGTTCGACTTTCGCAACCTTGGGGAATCTGAAGAAACACAGATCGACTAAACACTCCAGAGAGACGAATTCTAGGTCTGAGACTTCTTCCAGTGATCCTCAGAATTCTGATAACTGCCAGAAACAGAACGATCAAAGTGGAGATGATGGTGGATCGTCGAGTTCCGAGAATATTGAGAATTCATCTGCTGTCGTGGAGGTTTCCAAGTCGAGTCAAAATACTTCCTCTTCGACAAATGAGAATGTAAGATCGTGCAGGACCTCACCAACCTCTTCACCTGGACCAACAGACACGCCCTTCAAGTGTCATATTCCAAACTGCGATAATGGGTTCGCTGATCGTCAGGACTGCTTGGATCATATCAAGATGAATCATGAACGGGACTATGAGATCTTGGTTTCCAAGGGTGCTCTGCAGATGGGAATCCATGCTGCTGAGGAACAACCTCCACCGACTCAGCATTCGAGCGATGGTCCCAGGTCCCTTGACTACAAAGATAGAAAGGTGGTCTGTGCATTCTGCATGCGTCGATTCTGGTCAGCCGAAGATCTGCGTCGACATGTAAGAACTCACACAGGAGAAAAGCCCTTCTGGTGTGATATTTGCGATCGGAGATTCACTCTGAAGCATAGTATGCTTCGTCACCGGAAGAAGCACGAGTCAGCGGACTCAACAATGTATGTTGGAAGTGGTGATGAGGAAATTTCTCCCAGCCACCCTCCTACAATCACACCCAGAAGTCAGCAACAATCTCCAGCTCTAATTGCAGCGACCTCAGGAAGTTCAATGATCCAAGAAAGAATGTCTTTGCCAACAGTAGCGACTGTAGCGACTGGAGATGCTGCACCTAGTGGACTGATGAGATTTAACCCCTATGAAAAACTTACAACTTTAACGGGCAAATTATCTCAGCAGAGCAACTCTGATAACACTGAAAGTGGCAATGATCTGATCTCAAATTTACTGGGTATCAAGGATCCAGGAATTGTTGACAAAATGCTTCTTGCAACTCCCGATGATGCCGCAAAACTTTTAGGAGTTAAGGGTAACAACGAGTGA
Protein Sequence: MVREEGVPALVRATSAGAGGEDSCFFLSCFNPLILSQVEITWLNRYLQPARYCTSCNVPILDSQSWRSTDFTIGSVLYQCCSTVTVLHQYLNPVQKQTWLISTEQLYHPNTQPDLRQYLFQHHASVSQCWPVLALYYANCKFPLGIDVFIFTILLLSFFARRELGPQKFDDLVNPKISLYQTHSSETTQTHIASSLLIDQSERSHPCPACPTVLPTVRDLTNHLRNHNSPRSIDSSIDEEFSCRVCYKVLSSASSLDRHVLVHSGERPFKCKKCDMAFTTNGNMTRHSKTAHNHLSPNSCSDSEASNDSESPSKKFEEYNNNDIAKRNSPDLIDKIESPNFIKKRKSLDYTEDLSLQKKFKANLSENQNYNCHSDFEKCEPDNLSFKNHRVLNLNRSENNINENSLRNVARNLRHSVEGFTDLTFVDFTSKKYPVIARAKCEEFLHRPTSGDMAKFQCSKCLRAFPCKSALDSHELDCGLSNVQWKGSDVQSRRDDFFAGLNLQNKAAMTEAREGKDLADIQSIISLTSSPILHNFSRSDASTPDNCSNRINQNVGSSGSSGTLSSEYHEEETQDAFAAEFRKMKLKGEFPCKLCKEIFPNLRALKGHNRTHLGVGPGMPYPCNICPYTSTDKTTLTRHLKTHNGDRPFECAECGYAFTTKANCERHVRNRHGIHDKNHVQKMIIYHPTEDSTNESLDRSSSRSVKDDVRKTLVYPKEEPVPPNHYSVLMQTDIRIKDESKVIKEMNPISQLNQLSHLNQMKLNEITRLNQINQMNQINVQMNPYEKSEVFPRPKSVQPLELTYGSSPQNLITKSEDSKVDEDFESRSSEDSVSLVNETKPDVHQRIQASPMNLKKVRNDSPNVTSSDDGPLDLSMDVLDLSKKSKNIEVNQQKEVNENSEDQNENQKELYNAANPLFLTKALLKSHQVGSPSIPLEALYVKAQANMIYNNLGLGSAGAGFIPPYFFNSIFDQGYVMKERLQNELARGLQTSGGTLVEQSLENAGFNTSYPLARNSQQLEEEMSYTNMMQPKISSKVISPRERINESPSSNSVKMVIKNGVLMRKQKQRRYRTERPFTCEYCSAKFTLKTNMERHIKQQHNALWHRRPRGPHSTRGRPPTRPQTRPPTLLQDVGQASQAYLNIRSPYDVPLQKDDQSDYGKHSISDQVKYAILAQQLKGNKPEENETDEELIIDEEPGAEPRDHTKTLSLLRGKLESNSETKENYKEDDTMNDAEQPLEPRSDAPEEKEVLSDDENHERRAASENETISNEATELETPANEGTVKNEDGAVDLASVPKLIHNASQNYHQFKSQYLSDEDGAAHSISDHSGNRSGSDEKSENSVISTSSKRKKKKKKKASAYSMAPNRVVCKYCKRAFPWISSLRRHILTHTGVKPYRCEHCMLDFTTKSNCDRHLNRKHKSILQRNARNTRNSSSPDGQDMRVTNNNTFSTRNVPERPYKCNQCPSSTFATLGNLKKHRSTKHSRETNSRSETSSSDPQNSDNCQKQNDQSGDDGGSSSSENIENSSAVVEVSKSSQNTSSSTNENVRSCRTSPTSSPGPTDTPFKCHIPNCDNGFADRQDCLDHIKMNHERDYEILVSKGALQMGIHAAEEQPPPTQHSSDGPRSLDYKDRKVVCAFCMRRFWSAEDLRRHVRTHTGEKPFWCDICDRRFTLKHSMLRHRKKHESADSTMYVGSGDEEISPSHPPTITPRSQQQSPALIAATSGSSMIQERMSLPTVATVATGDAAPSGLMRFNPYEKLTTLTGKLSQQSNSDNTESGNDLISNLLGIKDPGIVDKMLLATPDDAAKLLGVKGNNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677055;
90% Identity: iTF_01394618;
80% Identity: -