Basic Information

Insect: Amphibolips quercusostensackenii
Gene Symbol: RREB1
Assembly: GCA_032357855.1
Location: JAUELO010000132.1:1303552-1313354[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.3 1.5e+02 5.5 0.1 1 23 46 68 46 68 0.95

2 14 0.0013 0.62 13.0 0.2 1 23 82 104 82 104 0.97

3 14 7.9e-06 0.0039 19.9 1.4 1 23 110 133 110 133 0.98

4 14 0.29 1.4e+02 5.5 0.8 1 19 296 314 296 316 0.94

5 14 0.0013 0.63 12.9 0.3 1 23 430 452 430 452 0.98

6 14 5.4e-06 0.0027 20.4 0.9 1 23 461 483 461 483 0.98

7 14 0.00021 0.11 15.4 1.4 1 23 489 512 489 512 0.97

8 14 0.00047 0.23 14.3 1.9 1 23 915 938 915 938 0.97

9 14 0.00061 0.3 13.9 0.3 2 23 1205 1226 1204 1226 0.97

10 14 1.2 5.9e+02 3.6 6.6 1 23 1232 1255 1232 1255 0.97

11 14 0.0059 2.9 10.8 1.5 1 23 1296 1320 1296 1320 0.97

12 14 1 5.1e+02 3.8 1.8 1 23 1402 1427 1402 1427 0.96

13 14 0.067 33 7.5 0.2 2 23 1472 1493 1471 1493 0.94

14 14 0.003 1.5 11.8 4.1 3 23 1501 1521 1499 1521 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.3	1.5e+02	5.5	0.1	1	23	46	68	46	68	0.95
2	14	0.0013	0.62	13.0	0.2	1	23	82	104	82	104	0.97
3	14	7.9e-06	0.0039	19.9	1.4	1	23	110	133	110	133	0.98
4	14	0.29	1.4e+02	5.5	0.8	1	19	296	314	296	316	0.94
5	14	0.0013	0.63	12.9	0.3	1	23	430	452	430	452	0.98
6	14	5.4e-06	0.0027	20.4	0.9	1	23	461	483	461	483	0.98
7	14	0.00021	0.11	15.4	1.4	1	23	489	512	489	512	0.97
8	14	0.00047	0.23	14.3	1.9	1	23	915	938	915	938	0.97
9	14	0.00061	0.3	13.9	0.3	2	23	1205	1226	1204	1226	0.97
10	14	1.2	5.9e+02	3.6	6.6	1	23	1232	1255	1232	1255	0.97
11	14	0.0059	2.9	10.8	1.5	1	23	1296	1320	1296	1320	0.97
12	14	1	5.1e+02	3.8	1.8	1	23	1402	1427	1402	1427	0.96
13	14	0.067	33	7.5	0.2	2	23	1472	1493	1471	1493	0.94
14	14	0.003	1.5	11.8	4.1	3	23	1501	1521	1499	1521	0.98

Sequence Information

Coding Sequence: ATGTTGGGCCATATTAAGCCCCGACCGGTAATCAAGCAGCCAGATCCGTCGCCGATCGGGGCTGCACGGACACACAACAGTGAGACTCAAACTGACATTGCATCATCGCTATTGaTTGAACAATCAGAAGAATCGCATCCCTGTCCAGCGTGCCCCTCAATCCTCCCAACAGTTCGGGACTTAACAAACCACCTGCGAAACCATAATTCGCCACGAAGTATCGACTGCAGCATTGACGAAGAATTCAGCTGCAGAGTATGTTACAAAGTACTAAGTTCGGCCAGTTCTCTAGACCGTCACGTTCTCGTGCATTCCGGTGAGCGGCCCTTCAAATGTAAACAGTGCGACATGGCTTTCACCACCAACGGAAACATGACGAGACACTCGAAAACAGCTCACAATCATCTCTCACCAAATAGCTGTTCGGATTCTGAAGCCAGCAATGATTCAGAATCGCCCTCCAAAAAATTCGAGGAGTACAACAACAACGAAATCGCCAAACGGAACTCGCCTGACCTCATCGACAAACTAGAGTCTCCTACTTTCATCAAGAAGAGGAAATCCCTCGACTACACGGAGGATCTTAGCttgcagaaaaaattcaaaacacacTTAGATAACCAGAAGTACAACTGTCATTCTGACTTCGAGAAATGCGAACCCGACAATCTGTCGTTCAAAAACCACAAGGTCCTGAATCTTCATCGATCAGAgaacaattttaacgaaaattcccTTAGGAATGTTGCGAGGACCTTGAGACATTCGGTTGAAGGGTTTAGAGACCTAACATTCGTCGACTTCACATCGACAAAGTACCCTGTCATCGCGAGGGCGAAATGTGAAGAGTTTCTCCATCGACCAACATCCGGGGACATGACGAAGTTCCAGTGTTCGAAATGCCTCCGGGCTTTCCCTTGTAAATCAGCATTGGAGTCTCATGAACTGGACTGCGGACTTCCGAATATCCAATGGAAAGGTAGTGACGTTCAATCCAGAAGGGATGATTTTTTTGCAGGACTTAATCTACAAAACAAGGCAGCCATGACAGAAGCTAAAGAGGGAAAAGACCTCGCAGATATCCAGAGCATCATTAGCTTAACCTCGAGTCCGATCCTTCACAACTTCTCCAGATCCGATGCGAGCACTCCTGACAACTGCAGTAGTAAAGTCAACCAGAATGTTGGATCTTCTGGATCATCCGGAACCCTTTCTTCAGAGTACCATGAGGAGGAAACACAAGATGCCTTTGCAGCGGAGTTCAGAAAAATGAAGCTTAAGGGCGAGTTTCCTTGTAAACTTTGCAAGGAAATCTTTCCCAACTTGAGAGCCTTAAAGGGCCACAATAGAACCCACTTGGGTGTTGGACCTGGAATGCCCTATCCATGTAACATCTGTCCTTATACGAGCACTGACAAGACAACCCTTACGAGGCATCTGAAGACGCACAATGGTGATAGACCCTTCGAGTGTGCTGAGTGCGGCTACGCTTTTACGACAAAGGCCAACTGCGAAAGGCACGTGAGGAATCGACATGGAATTCATGACAAAAATGATGTTCAGAAGATGATCATTTATCACCCGACTGAGGACTCTACGAACGAAAGTTTGGATAGGACATCATCGAGAAGTGTGAAAGATGAAGTAAGGAAGGCTCTCGTTTATCCTAAAGAGGAACCACTTCCCCAGCATCATTACTCTGTCATGTTACAACCAGACATTAGAATAAAGGAGGAAAGCAAGGTCAATAAAGAGATAAATCCCATAAGTCAGCTAAACCAAATGAATCAGCTAAACCAACTTAACCAGCTGAGCCACATAAGCCAAATCAATCAACTAAATCAAATAAACCAAATGAACCAGATCAACCTACAGATGAACCACTACGATAAATCGGAGGTATTTCCCAGGCCAAAATCAGTTCAACCTCTCGAGTTGACCTACAGAACTTCCCCCCAGCATCTGATCATGAAGTCTGAAAATTCCAGGATGGATGAAGATCTCGAGTCAAGGTCATCGGAGGACAGCGTATCTCTAGTCAATGAAACCAAACCGGACGTACACCAAAGAATACAAGCTAGTCCGATGAACTTGAAGAAGGTCGCGAATGATTCCTCCAACGTGACTTCGAGCGATGATGGGCCCCTGGATCTATCGATGGATGTTCTTGACCTGAGCAAAAAATCTAAGCAAAAACCAGAAATAAACGAAAATTCCGATGAGCAGAATGAAAACCAAAAGGACTTTTACAACGCTACGAATCCTCTCTTGCTGACACGAGCTTTATTAAAATCTCGTCAAGTTTCCCCTCCAACTTCCTTGGAAGCTTTGTATGCCAACGCACATGCGAACATGATCTACAGCAATTTGGCTCTAGGATCAGCAGGTGCAGGATTGATAGCACCTTATTTCTTCAATCCACTTTTTGATCAAGGTTACGTGATGAAAGAAAGATTACAGAAGGAACTGGCTAGAGGTCTTCAAACTAGTGGTGGCACTTTGGTCGAACAGCCACTTGAAAATACAGGATTTAATACCAGCTATCCTTCAGGAAGAAATTCACAACAACTCGATGAACAGATGAACTATTCAAATCTGATGCAGCCAAAAGTCCCCAGTAAGGTCATCTCAACCAGAGAGAGAATCAGCGATTCCCCGTCGCCGAATTCTGTCAAAATGGTCATTAAGAATGGTGTCCTCATGAGGAAGCAGAAGCAGAGGAGGTACAGAACTGAGAGACCTTTTACCTGTGAATATTGCTCAGCAAAATTCACACTCAAGACTAATATGGAGAGGCATATAAAACAACAGCACAATGCCTTGTGGCATCGAAGACCTAGAGGTGGACATTCTACGAGAGGTCGACCTCCAGCGAGACCTCAAGCAAGACCTCCAGGGTTGCTTCAAGATGTAGGCCAGGCTTCTCAGGCCTTTCTGAACAGGAGCTCTCCCTATGAAGTTCCATTGCAGAAAGAGGATCAGTCTGATTATGGAAAGCATTCTATTTCTGATCAGGTCAAGTATGCAATCCTTGCTCAGCAACTGAAGGGAAACAGGCCAGAGGAAAATGAAACTGATGAGGAGTTGATCATCGATGAAGAACCTGGTGCAGAGCCCCGAGATCATATAAAAACAATGAGCTTATTAAGAGGGAAGCTCGAAAGTAATTCAGATGTTAGAGAACAAAAAGATGACATGCATGCTCCTGAACACCCTTTGGATCTCAAAAGTGAAGCACCAGAACAGAAAGAGGCTCCTTCTGATGACGAAGACCCCGAAAAAAGAGTCGCTTCCGAAAGTGAGACGAATTCTAATGATGCGACTGAATTGAAAACTCCAGCAAATGAAGGAACCGTGAAAAATGAAGATGAGGCTGTGGACCTAGCCAGTGTTCCTAAACTAATTCACAACGCCTCTCAAAATTACCACCAATTCAAATCTCAGTATTTAAGTGACGAAGATGGCGCCGCTCACTCCAATAGTGATCACTCTGGAAATCATTCCGGAAGTGACGAGAAATCGGAGAACTCTGCTATTTCGACATCTTCCaagaggaaaaagaagaagaaaaaaaagaaggctTCTGCTTACTCCATGGCACCTAACAGAGTAGAGTGTAAATATTGTAAACGAGCATTCCCGTGGATTTCTTCATTGAGGAGGCACATTCTCACCCATACTGGAGTCAAGCCATACAGATGTGAGCATTGCATGTTGGATTTTACGACAAAGTCTAACTGTGATCGTCACCTGAACCGGAAACACAAGAGCCTTCTTCAGCGGGCAAATCCTAGAAGCACCAGAAATTCTTCCTCTCCTGATGGTCAAGACATGAGGGTGACGAATAACAATACTTTCTCGACAAGAAACGTTCCAGAGAGACCCTACAAGTGCAATCAATGTCCTAGTTCCACTTTCGCGACCTTGGGGAATCTGAAGAAGCACAGGTCGACAAAACACTCCAGAGAGACGAATTCTAGGTCTGAAACTTCTTCTAGTGATCCTCAACATTCTGACAACTGTCAGAAACAGAACGATCAGAGTGGAGATGATGGTGGATCTTCGAGTTCGGAGAACATGGAGAATTCATCTGCTGGGATCGAGGTTCCCAAGTCATGTCCAAACACTTCCTCTTCGACGAATGAGAATCTAAGGTCGTGTAGAACTTCACCAAGGTCTTCACCTGGACCAACAGACACGCCCTTCAAGTGTCATATTCCGAATTGCGATAATGGGTTCGCTGATCGCCAGGACTGCTTGGATCATATCAAGATGAATCATGAGCGAGACTATGAGATTCTGGTTTCGAAGGGTGCTTTGCAGATGGGGATCTATGCTGCTGAGGAACAACCTCCACCGACTCAGCACTCGAGCGATGGTCCCAGGTCCCTTGACTACAAAGATAGAAAGGTGGTCTGTGCATTCTGCATGCGTCGATTTTGGTCAGCCGAAGATCTCCGACGTCACGTAAGAACCCACACGGGAGAAAAGCCCTTCTGGTGTGATATCTGCGACCGGAGATTCACCCTCAAACATAGTATGCTTCGTCACCGGAAGAAGCACGAAGCAGCGGACTCAACAGTCTACCCTGGAAGCGGCGACGAGGAAATTTCTCCAACCCATCCTTCTACAATCCCTCCCAGAAGTCAGCAGCAATCCCNNNNNNNNNNNNNNNNNNNNTCAGGAAGTTCAATGAGTCATGAAAGAATGTCCTTGCCAACAGTAGCGACTGTTGCCACTGGAGATGCTGCACCTAGTGGACTGATGAGGTTCAACCACTACGAAAAACTGACAACTATAACTGGGAAATCATCCCAGCAAAGCAACCCTGATGCCGCTGAAACTGGAAATGACCTAATATCAAATTTACTGGGAATCAAAGATCCAGGCATTATTGACAAAATGCTTCTTGCAACTCCTGATGATGCCGCAAAACTTTTGGGTGTCAAAGGCAacgagtga
Protein Sequence: MLGHIKPRPVIKQPDPSPIGAARTHNSETQTDIASSLLIEQSEESHPCPACPSILPTVRDLTNHLRNHNSPRSIDCSIDEEFSCRVCYKVLSSASSLDRHVLVHSGERPFKCKQCDMAFTTNGNMTRHSKTAHNHLSPNSCSDSEASNDSESPSKKFEEYNNNEIAKRNSPDLIDKLESPTFIKKRKSLDYTEDLSLQKKFKTHLDNQKYNCHSDFEKCEPDNLSFKNHKVLNLHRSENNFNENSLRNVARTLRHSVEGFRDLTFVDFTSTKYPVIARAKCEEFLHRPTSGDMTKFQCSKCLRAFPCKSALESHELDCGLPNIQWKGSDVQSRRDDFFAGLNLQNKAAMTEAKEGKDLADIQSIISLTSSPILHNFSRSDASTPDNCSSKVNQNVGSSGSSGTLSSEYHEEETQDAFAAEFRKMKLKGEFPCKLCKEIFPNLRALKGHNRTHLGVGPGMPYPCNICPYTSTDKTTLTRHLKTHNGDRPFECAECGYAFTTKANCERHVRNRHGIHDKNDVQKMIIYHPTEDSTNESLDRTSSRSVKDEVRKALVYPKEEPLPQHHYSVMLQPDIRIKEESKVNKEINPISQLNQMNQLNQLNQLSHISQINQLNQINQMNQINLQMNHYDKSEVFPRPKSVQPLELTYRTSPQHLIMKSENSRMDEDLESRSSEDSVSLVNETKPDVHQRIQASPMNLKKVANDSSNVTSSDDGPLDLSMDVLDLSKKSKQKPEINENSDEQNENQKDFYNATNPLLLTRALLKSRQVSPPTSLEALYANAHANMIYSNLALGSAGAGLIAPYFFNPLFDQGYVMKERLQKELARGLQTSGGTLVEQPLENTGFNTSYPSGRNSQQLDEQMNYSNLMQPKVPSKVISTRERISDSPSPNSVKMVIKNGVLMRKQKQRRYRTERPFTCEYCSAKFTLKTNMERHIKQQHNALWHRRPRGGHSTRGRPPARPQARPPGLLQDVGQASQAFLNRSSPYEVPLQKEDQSDYGKHSISDQVKYAILAQQLKGNRPEENETDEELIIDEEPGAEPRDHIKTMSLLRGKLESNSDVREQKDDMHAPEHPLDLKSEAPEQKEAPSDDEDPEKRVASESETNSNDATELKTPANEGTVKNEDEAVDLASVPKLIHNASQNYHQFKSQYLSDEDGAAHSNSDHSGNHSGSDEKSENSAISTSSKRKKKKKKKKASAYSMAPNRVECKYCKRAFPWISSLRRHILTHTGVKPYRCEHCMLDFTTKSNCDRHLNRKHKSLLQRANPRSTRNSSSPDGQDMRVTNNNTFSTRNVPERPYKCNQCPSSTFATLGNLKKHRSTKHSRETNSRSETSSSDPQHSDNCQKQNDQSGDDGGSSSSENMENSSAGIEVPKSCPNTSSSTNENLRSCRTSPRSSPGPTDTPFKCHIPNCDNGFADRQDCLDHIKMNHERDYEILVSKGALQMGIYAAEEQPPPTQHSSDGPRSLDYKDRKVVCAFCMRRFWSAEDLRRHVRTHTGEKPFWCDICDRRFTLKHSMLRHRKKHEAADSTVYPGSGDEEISPTHPSTIPPRSQQQSXXXXXXXSGSSMSHERMSLPTVATVATGDAAPSGLMRFNHYEKLTTITGKSSQQSNPDAAETGNDLISNLLGIKDPGIIDKMLLATPDDAAKLLGVKGNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677055;
90% Identity: iTF_00201048;
80% Identity: -