Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856345.1:21755524-21794739[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.1e-05 0.0044 18.9 1.4 1 23 380 402 380 402 0.96

2 20 0.0025 0.36 12.9 0.9 1 20 408 427 408 430 0.94

3 20 2.3e-05 0.0033 19.3 5.4 1 23 449 471 449 471 0.98

4 20 0.0001 0.014 17.2 4.1 1 23 477 499 477 499 0.99

5 20 3.9e-05 0.0055 18.6 5.3 1 23 505 527 505 527 0.97

6 20 1.9e-06 0.00026 22.7 5.6 1 23 533 555 533 555 0.98

7 20 2e-06 0.00028 22.6 2.8 1 23 561 583 561 583 0.97

8 20 0.00011 0.015 17.2 6.7 1 23 589 611 589 611 0.97

9 20 2e-05 0.0029 19.4 6.4 1 23 617 639 617 639 0.98

10 20 5.1e-07 7.3e-05 24.5 1.9 1 23 645 667 645 667 0.98

11 20 5.2e-05 0.0074 18.2 7.9 1 23 673 695 673 695 0.98

12 20 2.7e-05 0.0038 19.1 6.6 1 23 701 723 701 723 0.98

13 20 4.7e-06 0.00067 21.5 5.2 1 23 729 751 729 751 0.98

14 20 8.6e-06 0.0012 20.6 5.0 1 23 757 779 757 779 0.96

15 20 1.1e-05 0.0016 20.2 5.2 1 23 785 807 785 807 0.98

16 20 1e-05 0.0015 20.4 5.6 1 23 813 835 813 835 0.98

17 20 0.00015 0.022 16.7 7.7 1 23 841 863 841 863 0.97

18 20 4.6e-08 6.5e-06 27.8 2.6 1 23 869 891 869 891 0.99

19 20 0.00023 0.033 16.1 1.2 1 23 898 920 898 921 0.95

20 20 0.028 4 9.6 5.4 1 23 929 951 929 951 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.1e-05	0.0044	18.9	1.4	1	23	380	402	380	402	0.96
2	20	0.0025	0.36	12.9	0.9	1	20	408	427	408	430	0.94
3	20	2.3e-05	0.0033	19.3	5.4	1	23	449	471	449	471	0.98
4	20	0.0001	0.014	17.2	4.1	1	23	477	499	477	499	0.99
5	20	3.9e-05	0.0055	18.6	5.3	1	23	505	527	505	527	0.97
6	20	1.9e-06	0.00026	22.7	5.6	1	23	533	555	533	555	0.98
7	20	2e-06	0.00028	22.6	2.8	1	23	561	583	561	583	0.97
8	20	0.00011	0.015	17.2	6.7	1	23	589	611	589	611	0.97
9	20	2e-05	0.0029	19.4	6.4	1	23	617	639	617	639	0.98
10	20	5.1e-07	7.3e-05	24.5	1.9	1	23	645	667	645	667	0.98
11	20	5.2e-05	0.0074	18.2	7.9	1	23	673	695	673	695	0.98
12	20	2.7e-05	0.0038	19.1	6.6	1	23	701	723	701	723	0.98
13	20	4.7e-06	0.00067	21.5	5.2	1	23	729	751	729	751	0.98
14	20	8.6e-06	0.0012	20.6	5.0	1	23	757	779	757	779	0.96
15	20	1.1e-05	0.0016	20.2	5.2	1	23	785	807	785	807	0.98
16	20	1e-05	0.0015	20.4	5.6	1	23	813	835	813	835	0.98
17	20	0.00015	0.022	16.7	7.7	1	23	841	863	841	863	0.97
18	20	4.6e-08	6.5e-06	27.8	2.6	1	23	869	891	869	891	0.99
19	20	0.00023	0.033	16.1	1.2	1	23	898	920	898	921	0.95
20	20	0.028	4	9.6	5.4	1	23	929	951	929	951	0.99

Sequence Information

Coding Sequence: atgaacCCGGAGCACCATAATATTAACCCGGGTGGTGGTCAACCTCCTGGGAGTTCAGAGTCTCAAGGACAAAGAGTGCAGGCTACACAACAGCAGCAACAAGGAAGTTTACCTGCCACGACGTCTGCCACGGATTTGCGAGTAAATACAGCAGCTGTAAATGTTGCTTTGTCCAGTGTAGCAAAGTATTGGGTATTTACGAACTTATTCCCTGGACCAATCCCACAAGTCTCAGTTTATGGATTGCCTACTGGAACTAGAATTGAAAATGGAAAGCCTGTACAGgACATCAGTCAACATGCAAGCATACTTAATGGTGATCCAAACATCATTTTGGGGCATCACAGTGGACAATCACAAGTCACTGTGTCAGCGGGAGCACAACAGATACCCGTTTCGCAGATCATTGCCACCCAATCAGGGCAGGGACAtgAAGCACTGGTTGCCCATAGCCAGCACAGCCAGGAGTTGTCACAGCAGACTTCTGGAAGCTCCCAGGTTTCGGGCACCGGCCAAGCTAACCACCAGCAGATCCAACTAACGGTGAGTGAAGATGGCATTGTGACTGTCGTCGAGCCAGGAAACAGTAAGATGGTAGACAAGGAAGAACTACACGAGACCATCAAACTGCCTTCCGATCATCCCTTGACGATCCACCAGTTGCAACAAATTGTTGGCCAACAGCTCGGCTCACAAGTATTAGAAAACGTAGTCCGCATCGAGCAAGCGACGGGAGAACCAGCCAACATTCTCGTCACACATAACGCGGACGGGACGACCTCCATCGAAGCGAGCGCGTCAGACCCACTGGCTATCGTCAAGGATGAGAAGACGCAAGGCAAGATGGAAACTGCGCAGTTCGCGATACCTGCAGAGATTAAGGATATAAAAGGCATTGACTTAAAGAGTGTCGGAGCAATGGGAATGGAGGGTGCCGTTGTGAAAATATCCACCGGAGCTGACCATGACATGACAGCCATGTACAAAGTTAATGTGGAAGACTTGTCGCAGTTGCTGGCGTATCACGAAGTCTTCGGGAAACTCAACACTGATGGCCAAGCACAAAATAAGGGTGAATTGGAGATCGATGTACCCGGCTCCAGCCAAATGTCTGAAGCGGAATCGTCGCCCGGACACCACGCCTGCGATATTTGCGGGAAAGTGTTTCAGTTCCGGTATCAACTTATTGTACACAGgaGGTACCACGGTGAAAGCAAGCCCTACAGCTGCCAAGTCTGCGGCTCGTCTTTCGCCAATCCCGTCGAATTATCACGCCATGGAAAATGCCATCTTGccggCGATCCAGTGGAGAGGCACGCCAAGCGGATAGCCCAAGACAAACCCTACGCCTGCTCGACTTGCCATAAAACGTTTTCGCGAAAAGAACACCTCGACAACCACGTCAGGAGTCATACCGGGGAGACCCCATACAGATGCGAGTTCTGTGCGAAAACGTTTACTCGCAAAGAGCACATGGTGAACCACGTGAGGAAACATACGGGCGAGACGCCGCACCGCTGTGATATCTGCAAGAAAAGCTTCACGAGGAAGGAGCATTTCATGAACCACGTCATGTGGCACACAGGTGAGACGCCACATCAATGCCTAGTCTGTGGCAAGAAGTATACTAGAAAGGAACACCTGACGAACCATATGCGATCTCATACGAATGATACGCCGTTCAGATGTGACCTCTGCGGTAAATCGTTTACGAGAAAAGAACACTTCTCTAATCACATTCTGTGGCATACTGGCGAAACGCCCCACCGTTGCGACTTTTGTTCGAAGACGTTCACCCGCAAGGAGCACCTCCTGAACCATGTGAGACAGCATACGGGAGAGTCTCCTCACCGATGCAACTACTGTTCGAAATCGTTCACGAGACGCGAACACCTCGTGAACCATGTGCGGCAGCATACGGGAGAGACACCGTTCCAGTGCGGGTATTGCCCCAAGGCGTTCACACGGAAGGATCATCTCGTGAATCACGTGCGTCAACACACGGGAGAGTCGCCCCACAAGTGTTCGTTCTGCACCAAGTCCTTCACTCGGAAGGAGCACCTGACGAACCACGTACGGCAACATACGGGCGAGTCGCCGCACCGCTGCACATACTGCGCCAAGTCGTTCACGAGGAAAGAACATCTCACCAATCACGTTCGACAGCACACCGGCGAAACGCCGCACAAGTGCACGTATTGCCCGCGCGCGTTCTCGCGGAAAGAGCACCTCAACAACCACGTGAGACAGCACACGGGCATCACTCCCCACGCCTGCTCCTATTGCAACAAGAGCTTCACCAGGAAGGAGCATCTTGTCAACCATGTCAGGCAACACACGGGCGAAACTCCGTTCAAGTGCACGTTCTGTTCGAAGtcgttctctcgcaaggagcacCTCACGAACCACGTGAACCTTCACACGGGCGAGACGCCGCACAAGTGTCCGTTCTGCACTAAGAGCTACTCCAGGAAAGAGCATCTCACTAACCACGTCAGgATCCACACGGGCGAATCGCCTCACCGGTGCGATTTCTGCCAGAAGACGTTTACCCGCAAGGAACACCTCTCGAATCACCTTAAACAGCACACCGGCGACGCGGCTTACACGTGCAAGATTTGTTCCAAGACTTTCACAAGAAAGGAGCAGTTGATTACACATATGAGGTCGCACACTTGCGGCGAGAAGCCGTACAGCTGCGAAGAGTGCGGCAAGTCGTTCCCGCTGAAGGGCAACCTGATGTTCCACGAGCGGTCGCACCACAAGGGCGGCGGGCCGCGCCCCTTCCGCTGCGACGTCTGCTCGAAGGACTTCATGTGCAAAGGGCACTTGATATCGCACCGGCGCACGCACGCGGACGCGGCCGCGGCGCCGGCTGCGGAGacgcgcgcgcccgccgccgaCGAATGCACGCCCAAGTGCGTCAAGCTCGAGGCAGACCCCGTCGAGAGCAAACCCAAAATTGAAGAAGTACGAACAGAGATCATAGTCCCGCACCCACAGACTTCACCCAACAATGCCACAGTGATGCAGATTTCTAaccaaCAACCCCGTTCGGTGACCGTGTCGAGCGCGGCCGGCATCTCATCCGCGACGTTCACGCACACTGTGACGGCGCAGCACCACGCCGGCGCGGCCATCGCGCACCATCCCGTCAGCGTCACCTACTAG
Protein Sequence: MNPEHHNINPGGGQPPGSSESQGQRVQATQQQQQGSLPATTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDISQHASILNGDPNIILGHHSGQSQVTVSAGAQQIPVSQIIATQSGQGHEALVAHSQHSQELSQQTSGSSQVSGTGQANHQQIQLTVSEDGIVTVVEPGNSKMVDKEELHETIKLPSDHPLTIHQLQQIVGQQLGSQVLENVVRIEQATGEPANILVTHNADGTTSIEASASDPLAIVKDEKTQGKMETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISTGADHDMTAMYKVNVEDLSQLLAYHEVFGKLNTDGQAQNKGELEIDVPGSSQMSEAESSPGHHACDICGKVFQFRYQLIVHRRYHGESKPYSCQVCGSSFANPVELSRHGKCHLAGDPVERHAKRIAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCLVCGKKYTRKEHLTNHMRSHTNDTPFRCDLCGKSFTRKEHFSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGITPHACSYCNKSFTRKEHLVNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKSYSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLSNHLKQHTGDAAYTCKICSKTFTRKEQLITHMRSHTCGEKPYSCEECGKSFPLKGNLMFHERSHHKGGGPRPFRCDVCSKDFMCKGHLISHRRTHADAAAAPAAETRAPAADECTPKCVKLEADPVESKPKIEEVRTEIIVPHPQTSPNNATVMQISNQQPRSVTVSSAAGISSATFTHTVTAQHHAGAAIAHHPVSVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634704; iTF_00390596; iTF_00935920; iTF_00896124; iTF_00649329; iTF_00649322; iTF_00034004; iTF_00033114; iTF_00913819;
90% Identity: iTF_00634704;
80% Identity: iTF_00634704;