Basic Information

Insect: Agriopis marginaria
Gene Symbol: -
Assembly: GCA_932301435.1
Location: CAKOAR010000021.1:707704-740304[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3e-05 0.0018 19.0 2.2 1 23 415 437 415 437 0.97

2 18 0.0026 0.15 12.9 0.9 1 20 443 462 443 465 0.94

3 18 2.3e-05 0.0014 19.4 5.6 1 23 484 506 484 506 0.98

4 18 0.00011 0.0063 17.3 4.1 1 23 512 534 512 534 0.99

5 18 4e-05 0.0024 18.6 5.3 1 23 540 562 540 562 0.97

6 18 0.00011 0.0065 17.2 6.7 1 23 568 590 568 590 0.97

7 18 0.00011 0.0065 17.2 6.5 1 23 596 618 596 618 0.97

8 18 5.3e-07 3.1e-05 24.5 1.9 1 23 624 646 624 646 0.98

9 18 5.4e-05 0.0032 18.2 7.9 1 23 652 674 652 674 0.98

10 18 3.8e-05 0.0022 18.7 2.3 1 20 680 699 680 701 0.94

11 18 4.9e-06 0.00029 21.5 5.2 1 23 720 742 720 742 0.98

12 18 1.4e-05 0.00081 20.1 4.9 1 23 748 770 748 770 0.96

13 18 1.2e-05 0.0007 20.2 5.2 1 23 776 798 776 798 0.98

14 18 3.3e-06 0.0002 22.0 6.0 1 23 804 826 804 826 0.98

15 18 9.7e-05 0.0057 17.4 7.7 1 23 832 854 832 854 0.97

16 18 3.7e-06 0.00022 21.9 5.2 1 23 860 882 860 882 0.98

17 18 0.00036 0.022 15.6 0.3 1 23 889 911 889 911 0.97

18 18 0.028 1.6 9.6 5.3 1 23 920 942 920 942 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3e-05	0.0018	19.0	2.2	1	23	415	437	415	437	0.97
2	18	0.0026	0.15	12.9	0.9	1	20	443	462	443	465	0.94
3	18	2.3e-05	0.0014	19.4	5.6	1	23	484	506	484	506	0.98
4	18	0.00011	0.0063	17.3	4.1	1	23	512	534	512	534	0.99
5	18	4e-05	0.0024	18.6	5.3	1	23	540	562	540	562	0.97
6	18	0.00011	0.0065	17.2	6.7	1	23	568	590	568	590	0.97
7	18	0.00011	0.0065	17.2	6.5	1	23	596	618	596	618	0.97
8	18	5.3e-07	3.1e-05	24.5	1.9	1	23	624	646	624	646	0.98
9	18	5.4e-05	0.0032	18.2	7.9	1	23	652	674	652	674	0.98
10	18	3.8e-05	0.0022	18.7	2.3	1	20	680	699	680	701	0.94
11	18	4.9e-06	0.00029	21.5	5.2	1	23	720	742	720	742	0.98
12	18	1.4e-05	0.00081	20.1	4.9	1	23	748	770	748	770	0.96
13	18	1.2e-05	0.0007	20.2	5.2	1	23	776	798	776	798	0.98
14	18	3.3e-06	0.0002	22.0	6.0	1	23	804	826	804	826	0.98
15	18	9.7e-05	0.0057	17.4	7.7	1	23	832	854	832	854	0.97
16	18	3.7e-06	0.00022	21.9	5.2	1	23	860	882	860	882	0.98
17	18	0.00036	0.022	15.6	0.3	1	23	889	911	889	911	0.97
18	18	0.028	1.6	9.6	5.3	1	23	920	942	920	942	0.99

Sequence Information

Coding Sequence: ATGAATCCGGATCACCACAATATCAACCCGGGTGGTGGTCAGCCTCCTGGGAGTTCAGAGCCACAAGGGCAGAGAGTACAGGCTGGACAACAACAGCAGCAAGTAAGCTTGCCTGCGACGACATCTGCTACGGATTTACGAGTGAATACAGCAGCTGTAAATGTGGCTTTGTCCAGTGTAGCAAAGTATTGGGTATTTACGAACTTATTCCCTGGACCAATCCCACAAGTCTCCGTTTATGGATTACCCACTGGAACTAGAATTGAAAACGGAAAACCTGTACAGGACATTCAACATGCGAGCATACTGAATGGTGATCCGAACATTATCCTGGGACACCATGGTGGGCAGCCACAGGTCACCGTCTCTGCAGGTGCTCAGCAGATACCCGTATCCCAAATCATTGCTACACAGTCAGGGCAGACACATGAAGCGCTGGTTGCTCACAGCCAGGAGCTGGTGCAGCAGGCCGCAGGAGGCTCCCAGGTTTCTGTCGCCGGCCAGGCAACCCACCAGCAGGTACCCAATAACCGGGTCGAATTTGTACAACACCATAACATTGATATGGGTCATCATTCTCAACAACACATTCTGCAACAGCAGCTAATGACAGCGCGCCCCGACCACACCAATCAACAGATCCAGCTGACGGTCAGTGAAGATGGCATTGTGACTGTCGTCGAGCCAGGCAACAGTAAGATGGTCGACAAGGAAGAACTGCATGAGACCATCAAACTACCGTCCGACCATCCCTTGACGATCCAACAGTTGCAGCAAATCGTTGGCCAACAGCTGGGTACACAAGTACTAGAAAACGTAGTGCGCATAGAGCAAGCCACGGGCGAGCCAGCCAACATTCTCGTAACCCACAACGCTGATGGGACCACGTCTATAGAAGCAAGTGCGTCTGATCCGCTTGCCATCGTAAAAGATGAGAAGACACAGGGAAAAATGGACACAGCACAGTTTGCTATACCTACTGAAATTAAGGACATTAAAGGCATCGATTTGAAGAGTGTGGGAGCGATGGGTATGGAAGGTGCAGTAGTGAAGATATCCGCCGGGGACCATGACATGACGGCCATGTACAAAGTTAATGTGGAAGATCTATCGCAGCTGCTGGCATATCACGAAGTCTTCGGAAAGCTGAACACTGATGGCCAGACGCAAAATAAGGGTGAATTAGAAATTGAAGTGCCAGGATCTAGCCAGATGTCGGAAGCGGAATCGTCTCCCGGCCACCATTCTTGTGATATCTGCGGAAAAGTGTTCCAGTTCCGGTATCAACTTATTGTTCACAGACGATATCATGGTGAAAGCAAACCGTACAGTTGTCAAGTCTGCGGTTCGTCATTTGCCAACCCGGTTGAATTATCACGCCACGGGAAATGCCATCTTGCCGGTGATCCAGTGGAGAGACACGCCAAAAGGATAGCCCAGGACAAACCCTACGCCTGCACAACTTGCCATAAAACATTCTCCCGTAAAGAACATCTCGACAACCATGTCCGGAGCCACACTGGAGAAACGCCTTACAGATGTGAGTTCTGCGCGAAAACGTTCACTCGCAAGGAGCACATGGTAAATCATGTGAGAAAACACACGGGCGAAACGCCGCATCGCTGCGACATCTGCAAGAAAAGCTTTACCAGGAAAGAACACTTTATGAACCACGTCATGTGGCATACAGGCGAGACCCCCCACCGTTGTGACTTCTGTTCAAAAACATTCACCCGCAAAGAGCACCTACTGAACCATGTTCGACAGCACACGGGCGAGTCTCCTCACCGCTGCAACTTCTGTTCGAAGTCGTTCACGAGACGCGAGCACCTCGTGAACCATGTCAGGCAGCACACTGGGGAGACGCCCTTTCAGTGTGGGTACTGCCCCAAGGCGTTCACTAGGAAGGACCATCTAGTGAATCACGTCCGACAGCACACCGGGGAGTCCCCCCACAAATGTTCTTTCTGCACGAAGTCGTTTACCCGCAAGGAGCACCTCACGAACCACGTGCGTCAACACACGGGCGAGTCGCCGCACCGCTGCACTTACTGCGCCAAGTCGTTCACTAGGAAAGAGCATCTTACCAACCATGTCAGCATAATAACCAAATCGGAATGTACTCTGTTGCGCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTACTGCCCGCGCGCGTTCTCGCGCAAGGAACACCTCAACAACCACGTGAGGCAACATACCGGCGTCACGCCGCACGCCTGCTCCTACTGCAACAAGAGCTTCACGAGGAGGGAGCATCTCGTCAACCATGTCAGGCAACACACAGGCGAAACTCCGTTCAAGTGCACGTTCTGTTCGAAGTCGTTCTCTCGCAAGGAGCACCTCACTAACCACGTGAACCTGCACACTGGGGAGACGCCGCACAAGTGTCCCTTCTGCACTAAGACATTCTCGAGGAAAGAACATCTCACCAACCACGTCAGAATCCATACGGGCGAATCACCGCACCGCTGTGACTTCTGCCAGAAGACATTCACGCGCAGAGAGCATCTCACTAACCACCTGAAACAGCATACGGGCGACGCCGCGCACACCTGCAAAGTTTGCTCCAAGCCTTTCACCAGGAAAGAACATTTGGTTACCCATATGAGATCTCACAGTTGCGGCGAAAAGCCTTACAGTTGCGGCGAATGTGGCAAGTCGTTCCCGCTGAAAGGCAACTTGATGTTCCACGAGCGGTCGCACCAGAAGGGCGGAGGCGCGCGGCCCTTCCGCTGCGAGGTCTGCTCTAAGGACTTCATGTGCAAAGGTCATTTGATCTCGCACCGTCGCACACACGCGGACGCGAGCGCGACGACTGCGGCGGAGGCGCTTCCCGCGTCAGATGATTGTACCACAAAGTGCGTCAAAGTGGAATCTGACCCTCTCGCACTCGAAAGCAAACCTAAAATTGAAGAAGTACGCACAACTGAAAACATCATAGTTCCACACCCACAAGCCTCACCGAACAACACCACTGTGATGCAGATATCAAATCAACAACCCTGCACTGTGACCGTATCAAGTGCATCTGGCATCGCAACAGCTACGTTCACTCACACGGTGTCAGCGCAGCATCACGCCGGCGCGGCCATCGCGCATCATCCCGTCAGCGTCACCTACTAG
Protein Sequence: MNPDHHNINPGGGQPPGSSEPQGQRVQAGQQQQQVSLPATTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDIQHASILNGDPNIILGHHGGQPQVTVSAGAQQIPVSQIIATQSGQTHEALVAHSQELVQQAAGGSQVSVAGQATHQQVPNNRVEFVQHHNIDMGHHSQQHILQQQLMTARPDHTNQQIQLTVSEDGIVTVVEPGNSKMVDKEELHETIKLPSDHPLTIQQLQQIVGQQLGTQVLENVVRIEQATGEPANILVTHNADGTTSIEASASDPLAIVKDEKTQGKMDTAQFAIPTEIKDIKGIDLKSVGAMGMEGAVVKISAGDHDMTAMYKVNVEDLSQLLAYHEVFGKLNTDGQTQNKGELEIEVPGSSQMSEAESSPGHHSCDICGKVFQFRYQLIVHRRYHGESKPYSCQVCGSSFANPVELSRHGKCHLAGDPVERHAKRIAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVSIITKSECTLLRRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGVTPHACSYCNKSFTRREHLVNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRREHLTNHLKQHTGDAAHTCKVCSKPFTRKEHLVTHMRSHSCGEKPYSCGECGKSFPLKGNLMFHERSHQKGGGARPFRCEVCSKDFMCKGHLISHRRTHADASATTAAEALPASDDCTTKCVKVESDPLALESKPKIEEVRTTENIIVPHPQASPNNTTVMQISNQQPCTVTVSSASGIATATFTHTVSAQHHAGAAIAHHPVSVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634709;
90% Identity: iTF_00635599;
80% Identity: -