Basic Information

Insect: Crocallis elinguaria
Gene Symbol: -
Assembly: GCA_907269065.1
Location: OU026069.1:28509155-28534735[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.9e-05 0.0023 18.9 2.2 1 23 420 442 420 442 0.97

2 20 0.0025 0.2 12.8 0.9 1 20 448 467 448 470 0.94

3 20 5.2e-06 0.0004 21.3 3.4 1 23 489 511 489 511 0.98

4 20 0.0001 0.008 17.2 4.1 1 23 517 539 517 539 0.99

5 20 3.9e-05 0.003 18.5 5.3 1 23 545 567 545 567 0.97

6 20 1.6e-06 0.00013 22.9 6.1 1 23 573 595 573 595 0.98

7 20 1.9e-06 0.00015 22.6 2.7 1 23 601 623 601 623 0.97

8 20 0.00011 0.0084 17.1 6.7 1 23 629 651 629 651 0.97

9 20 0.00011 0.0083 17.1 6.5 1 23 657 679 657 679 0.97

10 20 5.2e-07 4e-05 24.4 1.9 1 23 685 707 685 707 0.98

11 20 5.3e-05 0.0041 18.1 7.9 1 23 713 735 713 735 0.98

12 20 2.7e-05 0.0021 19.0 6.6 1 23 741 763 741 763 0.98

13 20 1.1e-05 0.00086 20.2 7.5 1 23 769 791 769 791 0.98

14 20 8.7e-06 0.00068 20.6 5.0 1 23 797 819 797 819 0.96

15 20 1.2e-05 0.0009 20.2 5.2 1 23 825 847 825 847 0.98

16 20 3.2e-06 0.00025 21.9 6.0 1 23 853 875 853 875 0.98

17 20 6.3e-05 0.0049 17.9 7.9 1 23 881 903 881 903 0.97

18 20 3.5e-06 0.00027 21.8 5.7 1 23 909 931 909 931 0.98

19 20 0.00035 0.027 15.5 0.3 1 23 938 960 938 960 0.97

20 20 0.0097 0.75 11.0 4.4 1 23 970 992 970 992 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.9e-05	0.0023	18.9	2.2	1	23	420	442	420	442	0.97
2	20	0.0025	0.2	12.8	0.9	1	20	448	467	448	470	0.94
3	20	5.2e-06	0.0004	21.3	3.4	1	23	489	511	489	511	0.98
4	20	0.0001	0.008	17.2	4.1	1	23	517	539	517	539	0.99
5	20	3.9e-05	0.003	18.5	5.3	1	23	545	567	545	567	0.97
6	20	1.6e-06	0.00013	22.9	6.1	1	23	573	595	573	595	0.98
7	20	1.9e-06	0.00015	22.6	2.7	1	23	601	623	601	623	0.97
8	20	0.00011	0.0084	17.1	6.7	1	23	629	651	629	651	0.97
9	20	0.00011	0.0083	17.1	6.5	1	23	657	679	657	679	0.97
10	20	5.2e-07	4e-05	24.4	1.9	1	23	685	707	685	707	0.98
11	20	5.3e-05	0.0041	18.1	7.9	1	23	713	735	713	735	0.98
12	20	2.7e-05	0.0021	19.0	6.6	1	23	741	763	741	763	0.98
13	20	1.1e-05	0.00086	20.2	7.5	1	23	769	791	769	791	0.98
14	20	8.7e-06	0.00068	20.6	5.0	1	23	797	819	797	819	0.96
15	20	1.2e-05	0.0009	20.2	5.2	1	23	825	847	825	847	0.98
16	20	3.2e-06	0.00025	21.9	6.0	1	23	853	875	853	875	0.98
17	20	6.3e-05	0.0049	17.9	7.9	1	23	881	903	881	903	0.97
18	20	3.5e-06	0.00027	21.8	5.7	1	23	909	931	909	931	0.98
19	20	0.00035	0.027	15.5	0.3	1	23	938	960	938	960	0.97
20	20	0.0097	0.75	11.0	4.4	1	23	970	992	970	992	0.99

Sequence Information

Coding Sequence: ATGAATCCGGAACACCATAATATCAATACGGGAGGTGGTCAGCCTCCTGGGAGTTCTGAGTCTCAGATACAGAGAGTGCAGGCTGCACAGCAACAGCAGCAGCAAGTAAGCCTACCAGCCACAACATCTGCCACGGATTTGCGAGTGAATACAGCGGCTGTGAATGTGGCTTTGTCGAGTGTAGCAAAGTATTGGGTATTTACAAACTTATTCCCCGGACCGATCCCACAAGTATCTGTGTATGGATTGCCAACTGGGACTAGAATTGAAAATGGAAAACCTGTTCAGGATATTGGCCAGCATGCAAGCATACTTAATGGTGATCCCAACATCATCCTTGGCCATCATGGTGGACAGCCACAGGTGACAGTGTCAGCAGGTGCGCAGCAAATACCTGTATCACAGATCATTGCATCACAATCAGGGCAGACACATGAAGCGCTAGTGGCTCATAGCCACCAACAGGAAATGGCGCAACAGGCGGCAGGAGCAACGCAGGTTTCAGTCGCCGCAGGGCAGGCAACTCATCACCAGGTACCCAATAGCCGGGTCGAATTTGTACAACACCATAACATTGATATGGGTCACCATTCTCAACAAATACTACAGCAGCAGCTGATGGCAGCGCGTCCGGATCACACCAATCAACAGATCCAACTAACAGTCAGTGAAGATGGCATTGTGACCGTCGTCGAGCCTGGAAGTAGTAAGATGGTAGACAAAGAAGAACTCCATGAGACTATCAAGCTGCCTTCAGACCACACTTTAACTGTCCACCAGTTACAGCAGATTGTGGGACAACAGCTTGGAACACAAGTACTAGAAAACGTAGTACGCATAGAACAAGCGACGGGGGAACCCGCTAACATCCTTGTTACTCACAACGCCGATGGGACCACGTCGATAGAAGCGAGCGCGTCTGATCCACTCGCCATTGTCAAAGACGAGAAGACGCAATCGAAAATGGAAACGGCTCAGTTCGCTATACCTGCCGAAATTAAGGACATTAAAGGCATCGATTTGAAGAGTGTGGGAGCAATGGGTATGGAAGGGGCAGTTGTAAAGATATCGACTGGAGCAGACCATGATATGACAGCCATGTACAAAGTAAATGTCGAAGACCTCTCTCAGTTACTGGCTTATCATGAAGTGTTTGGGAAACTCAATACAGATGGCCAGACGCAAAACAAGAGTGATATAGAAATAGACGTGCCGGGAACTAGCCAAATGTCCGAAGCGGAAACGTCGCCCGGACACCATTCCTGCGATATCTGCGGAAAAGTGTTCCAATTTAGATATCAGCTTATAGTTCACAGACGGTATCACGGCGAAAGTAAACCTTACTCTTGCCAAGTTTGCGGTTCTTCGTTCGCCAATCCCGTTGAATTGTCGCGCCACGGAAAGTGCCATCTTGCCGGCGATCCAGCGGAGCGACACGCCAAGAGGATGGCCCAAGACAAACCTTACGCCTGCACAACATGCAACAAAACGTTCTCGCGTAAAGAACATTTGGACAATCACGTCCGAAGTCACACCGGAGAGACTCCGTACAGATGCGAATTCTGCGCTAAAACTTTCACCCGCAAAGAGCACATGGTGAACCATGTACGGAAACACACCGGCGAAACTCCGCACAGATGTGATATCTGCAAGAAGAGTTTCACAAGGAAAGAGCATTTTATGAACCACGTCATGTGGCATACAGGTGAAACGCCACACCAATGCCAAGAGTGCGGCAAGAAGTATACTAGAAAGGAGCATTTGTCGAACCATATGAGATCGCATTCGAACGATACGCCTTTCAGATGTGAACTGTGCGGAAAATCTTTCACGAGAAAGGAACACTTCTCCAATCACATTCTGTGGCATACTGGCGAGACCCCTCACCGGTGCGACTTCTGTTCAAAAACTTTCACCCGCAAGGAGCACCTACTGAACCACGTGCGGCAACACACGGGCGAGTCGCCGCATCGCTGCAACTTTTGTTCGAAATCGTTCACAAGGCGGGAGCATCTTGTCAATCATGTGCGCCAACACACTGGGGAGACGCCGTTTCAGTGTGGATACTGCCCTAAAGCTTTCACTAGGAAGGACCATCTTGTGAACCACGTCCGGCAGCATACGGGGGAGTCCCCGCACAAGTGCTCGTTTTGCACTAAATCCTTCACCCGCAAGGAGCACCTCACGAACCACGTGCGCCAGCACACCGGCGAGTCGCCGCACCGCTGCACTTACTGCGCCAAGTCGTTCACGAGGAAGGAACATCTCACCAACCATGTTAGACAGCATACGGGCGAAACGCCACACAAGTGCACGCATTGCCCGCGAGCGTTTTCGCGGAAGGAGCATCTCAACAACCACTTGCGGCAACACACCGGCATCACGCCGCACGCCTGCTCCTATTGCAATAAGAGCTTCACGAGGAAAGAGCATCTCGTCAACCACGTGCGGCAACACACGGGCGAAACTCCGTTCAAGTGCACGTTCTGTTCGAAGTCGTTCTCCCGCAAAGAGCATCTCACGAACCACGTGAACCTGCACACTGGAGAGACGCCGCACAAGTGTCCCTTCTGCACTAAGACATTCTCCAGGAAAGAGCATCTCACCAATCACGTCAGAATTCACACCGGCGAATCGCCTCATCGTTGCGACTTCTGTCAAAAGACGTTCACACGCAAAGAACACCTCACCAACCATCTGAAGCAGCACACGGGAGACGCGGCGCACACATGCAAGGTTTGCTCGAAAGCGTTTACGAGGAAAGAGCATCTGCTTACACACATGAGATCTCACAGTTGCGGCGAACGGCCGTACAGTTGCGGAGAATGCGGCAAATCATTCCCCCTCAAAGGAAATCTCATGTTCCACGAACGCTCACACCAGAAGGGAGGCGGAGGCGCGCGACCCTTCCGCTGTGATGTTTGCTCTAAGGACTTTATGTGCAAAGGTCACCTGATCGCTCATCGGCGCACGCACGCGGACGCTGGCGCAATGCCGACGTCCGATACTCGTTCCGACGACGACTGCTCCGCCAAGTGCGTCAAGATCGAACAGGACCCACTAGCACCGGATACCAAGCCCAAGTTGGAAGAAATACGGTCGACTGAAAACATCATAGTCCCACAGACATCGCCAAACACAGCTGCTGTGATGCAAATAACCAACCAACAAGTCCGGGGACCAACATCTGGCGGTACCGGCATCACATCCGCCACATTCACGCACACCGTCACAACTCAACACCACGCCGGCACCGCCATTGCGCACCATCCTGTCAGCGTGACCTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSSESQIQRVQAAQQQQQQVSLPATTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDIGQHASILNGDPNIILGHHGGQPQVTVSAGAQQIPVSQIIASQSGQTHEALVAHSHQQEMAQQAAGATQVSVAAGQATHHQVPNSRVEFVQHHNIDMGHHSQQILQQQLMAARPDHTNQQIQLTVSEDGIVTVVEPGSSKMVDKEELHETIKLPSDHTLTVHQLQQIVGQQLGTQVLENVVRIEQATGEPANILVTHNADGTTSIEASASDPLAIVKDEKTQSKMETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISTGADHDMTAMYKVNVEDLSQLLAYHEVFGKLNTDGQTQNKSDIEIDVPGTSQMSEAETSPGHHSCDICGKVFQFRYQLIVHRRYHGESKPYSCQVCGSSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACTTCNKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCQECGKKYTRKEHLSNHMRSHSNDTPFRCELCGKSFTRKEHFSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTHCPRAFSRKEHLNNHLRQHTGITPHACSYCNKSFTRKEHLVNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDAAHTCKVCSKAFTRKEHLLTHMRSHSCGERPYSCGECGKSFPLKGNLMFHERSHQKGGGGARPFRCDVCSKDFMCKGHLIAHRRTHADAGAMPTSDTRSDDDCSAKCVKIEQDPLAPDTKPKLEEIRSTENIIVPQTSPNTAAVMQITNQQVRGPTSGGTGITSATFTHTVTTQHHAGTAIAHHPVSVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634709;
90% Identity: iTF_00143231;
80% Identity: -