Dtri038866.1
Basic Information
- Insect
- Dysmachus trigonus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949715965.1
- Location
- OX454323.1:31690061-31696906[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.21 1e+04 -3.1 0.5 77 112 48 90 19 95 0.61 2 3 4.1e-112 1.9e-107 360.4 33.0 1 299 114 398 114 399 0.92 3 3 0.0028 1.3e+02 3.0 4.0 208 247 416 454 401 472 0.75
Sequence Information
- Coding Sequence
- ATGGCacaacaaaatgaaaatgttatagTTCAAAATCTCGAAACAGATATTAATGAAAGTGTTGCCGCATCCTTGAATAAAAGCGATGATGATGAAGAATTTGACTTTAGTGATAGTGATTTTAAAGATTGCAAAAGTGATAACGCTGTTGAAGATAAAACAGGATCTGAAAATTTCGTagatataacaaataaaataaatgagagTGAGGATGAGCctaatgtaaaatataatagaattatATCAAGAAATCCAAGTGTAGACAATGACAGTGATTGGCTCTATAAGGAAAATGAAGATGAATTCATTGTTGATTTTCTTGGAAAAGGAAATGACATTgcaGAAGCTAGATTGGCTGCACGACGCCAGGCACGCGCAGAGGCGCGTGAAATTCGAATGCGTGAATTAGAACGCCAGCAAAAAGAACAAGAACAAAATGCTGATCGAGTATTTGACATGCAGACGGTGGCTGGGCTTGATCCCTTGTCCAGATCCCGGATAAATATGTCCGGAAATTCTGGAAGGGGTACATCAATGTCCTCAAGACGAAGCAGCGAGGACTCCCTTGAAGAAGAAAGCAGAAGTTTACGTGATATTAGGCATGAGCTTAAGGATGTTGAAGAACGATTTAGAAAAGCAATGATAGCAAATGCACAATTAGACAATGAAAGAGCCTCCCAATCATACCAAATCCAATTGTTAAAAGATAAATTGGAAGAAATGGAAGAATCATTTGCGCAACTCCAGAGGGAATTTAAGGAGAAATGTCGTGATCATAAcgctttaaaaagaaattatgatAAATTAGAAGAAGAATTAAAACTAGTTCGTGGACAATTAGATGAAAGAGATACACTTATAGCTGAGCAGGGTTTAGTTATAGTTCTGGTAGAAAATCAAGACGGCTCGGATGCCAGGCGCGCTCTAGTCAGTATGGAGAACGCACAACTATTAGGTTCTGTTCAAGGCTCATTagATGTGcggcttaaaaaattcacagaaGAAAAGCAACAACTCCAAAAAGAAGTCCAAAGCCTTCATCAGCAATTAAGCGACATTAAATCACAAGGTCGACGGGGTGGATCTCTAAATGGGCCTTTAGGAGCTGAAGATGACTATGAAGCTCAAAgagAGGCTAATAAACTAATAGCTGATTACAAGTATAAGCTTCAAAAAGCGGAACAAGAAATAGCTAGTCTACAAGCTAGTTTAGCAAGGTCTGAAACACAAGTTATAAGATATAAAAGTACTGCAGAAGCAGCTGAAAAGGCGGAAGGTGAACTAAAAATAGAGCGAAGAAAACTTCAGAGAGAGAATCGTGAATTAATGGAACGCTTGGAAGAACTCGAAACTTCCAATAATCACCTACTGAAACGCTTAGATAAACTAAAGAATGCGAAGAGCGCACTGCTCAAAGACCTCTGA
- Protein Sequence
- MAQQNENVIVQNLETDINESVAASLNKSDDDEEFDFSDSDFKDCKSDNAVEDKTGSENFVDITNKINESEDEPNVKYNRIISRNPSVDNDSDWLYKENEDEFIVDFLGKGNDIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTVAGLDPLSRSRINMSGNSGRGTSMSSRRSSEDSLEEESRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFAQLQREFKEKCRDHNALKRNYDKLEEELKLVRGQLDERDTLIAEQGLVIVLVENQDGSDARRALVSMENAQLLGSVQGSLDVRLKKFTEEKQQLQKEVQSLHQQLSDIKSQGRRGGSLNGPLGAEDDYEAQREANKLIADYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEGELKIERRKLQRENRELMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00936545; iTF_01461170; iTF_00937300; iTF_01256407; iTF_01183839;
- 90% Identity
- iTF_00936545; iTF_01183839; iTF_01461170; iTF_00937300;
- 80% Identity
- -