Tcin033654.1
Basic Information
- Insect
- Tolmerus cingulatus
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_959613345.1
- Location
- OY390710.1:12858239-12862287[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.2 9.5e+03 -3.1 1.3 74 112 45 89 13 95 0.59 2 3 8.9e-112 4.3e-107 359.3 33.2 1 299 113 397 113 398 0.91 3 3 0.0028 1.4e+02 3.0 4.0 208 247 415 453 400 471 0.75
Sequence Information
- Coding Sequence
- ATGGCACAACAAACCCAAAATGTTATAGTTCAAAATCTGGAAACAGATTTTACTAAAAGTGTTGCCGCATCCTTGAATAAAAGTGATGATGATGAGGAATTCGACTTCAGTGATAGCGATTTCAAAGATTGTGAAAGTGATAACGCAGTGGAAGATAAAACTGAATCTGACaagtttttagaaataacaaataaaacaaatgagaGTGATGAGCCTGatgttaaatataatagaaacatATCAAGAAATCAAAGTGTAGACAATGACGAAGATTGGCTCTATAAGGAAAGTGAAGATGAATTCATTGTTGATTTTCTTGGTAAAGGAAATGACATTgcGGAAGCTAGGTTGGCTGCACGGCGCCAGGCACGCGCCGAAGCGCGTGAAATTCGAATGCGTGAGTTAGAACGCCAGCAAAAAGAGCAGGAACAAAATGCTGATCGTGTGTTTGACATGCAGACTGTGGCTGGACTCGATCCTTTGGCAAGATCCCGGCTAAATATGTCTGGAAATTCTGGAAGAGGTACTTCAATGTCCTCAAGACGAAGCAGCGAAGACTCCCTCGAAGAAGAAAGCAAAAGTTTACGTGATATTAGGCATGAGCTTAAGgaTGTTGAAGAACGTTTTAGAAAAGCAATGATAGCAAATGCACAATTAGACAATGAAAGAGCCTCACAGTCATACCAAATCCAATTGTTAAAAGATAAATTGGAGGAAATGGAAGAGTCATTTGCGCAACTCCAGAGAGAATATAAGGAGAAATGTCGTGATCATAAcgctttaaaaagaaattatgatAAATTAGATGAAGAATTAAAACTAGTTCGTGGGCAATTAGACGAAAGAGATACTCTTATAGCTGAGCAGGGTTTAGTTATAGTTCTGGTAGAAAATCAAGATGGCTCAGATGCCAGGCGCGCTCTAGTCAGTATGGAGAACGCACAACTATTAGGTTCTGTTCAAGGCTCATTAGACGTGCGGCTTAAAAAATTCACTGAAGAAAAGCAACAACTCCAAAAAGAAGTCCAAAGCCTTCATCAGCAATTAAGTGACATTAAATCCCAAGGTCGACGGGGTGGATCTCTAAACGGGCCTTTAGGAGCAGAAGATGACTATGAAGCTCAAAGAGAGGCTAATAAACTTATAGctgattataaatataagctTCAAAAGGCAGAACAAGAAATAGCTAGTTTGCAAGCTAGCTTAGCAAGATCAGAGACACAAGTTATAAGATATAAAAGTACGGCAGAAGCAGCAGAAAAAGCAGAAGGTGAACTAAAAATAGAGCGACGAAAACTTCAAAGAGAGAATCGTGAATTAATGGAACGTTTGGAAGAACTCGAGACTTCCAATAATCACCTACTGAAACGCTTAGATAAACTAAAGAATGCGAAGAGCGCATTGCTCAAAGACCTCTGA
- Protein Sequence
- MAQQTQNVIVQNLETDFTKSVAASLNKSDDDEEFDFSDSDFKDCESDNAVEDKTESDKFLEITNKTNESDEPDVKYNRNISRNQSVDNDEDWLYKESEDEFIVDFLGKGNDIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTVAGLDPLARSRLNMSGNSGRGTSMSSRRSSEDSLEEESKSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFAQLQREYKEKCRDHNALKRNYDKLDEELKLVRGQLDERDTLIAEQGLVIVLVENQDGSDARRALVSMENAQLLGSVQGSLDVRLKKFTEEKQQLQKEVQSLHQQLSDIKSQGRRGGSLNGPLGAEDDYEAQREANKLIADYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEGELKIERRKLQRENRELMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00628366;
- 90% Identity
- iTF_00628366;
- 80% Identity
- -